Basic Information

Gene Symbol
kn
Assembly
GCA_008042815.1
Location
VNKE01004243.1:12485-17180[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.3e-139 4.3e-135 451.1 0.0 182 384 4 235 1 238 0.98
2 2 6.5e-08 0.00054 18.3 14.9 422 517 240 334 235 355 0.60

Sequence Information

Coding Sequence
ATGGCGCGAAACTTCTTCCTCAAGTTCTTTTTGAAGTGCAATCAAAATTGTCTGAAGAACGCCGGCAACCCGCGGGATATGCGCAGATTTCAGGTGGTGATCTCCACACAGGTGGCCGTTGATGGACCACTGCTGGCCATCTCCGACAACATGTTCGTGCACAACAATTCGAAGCACGGGCGGAGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCCCCGCTGCCCGTAGCAACGCCCTGCATAAAGGCGATCTCGCCCAGCGAGGGCTGGACAACTGGCGGCGCCACGGTGATCATTGTGGGCGACAACTTCTTCGACGGCCTCCAAGTGGTCTTTGGCACCATGCTGGTCTGGAGCGAGCTGATCACCTCGCATGCGATCCGGGTGCAGACGCCGCCGCGGCACATTCCCGGCGTGGTTGAGGTGACGCTATCCTACAAGAGCAAGCAATTCTGCAAGGGATCGCCCGGTCGCTTCGTCTATGTCTCAGCTCTCAACGAACCCACAATCGACTATGGTTTCCAGCGCCTGCAGAAGCTTATACCCCGGCATCCTGGGGATCCCGAGAAGCTGCAGAAGGAGATAATCCTCAAGAGGGCAGCCGATCTGGTCGAGGCTCTGTACTCCATGCCCAGCAGATCCCCGGGCGGCTCCACAGGCTTCAACTCCTATGCCGGCCAGCTGGCGGTCAGTGTCCAGGATGGCACTGGCCAGTGGACCGAGGACGACTACCAGCGAGCCCAGTCGAGCAGCGTGAGTCCGCGGGGTGGCTACTGCAGCAGCGCCTCCACGCCGCACAGCTCGGGAGGATCCTATGGCGCCACGGCTAGTGCAGCAGTGGCGGCCACTGCCAATGGTTATGCACCTGCGCCCAACATGGGCACGTTGTCCTCCTCGCCTGGTAGCGTTTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGTTTGTGCAGCACCATCATGCCGCGGCTGCCCATCCGCACCACCACTACCCGCATCCCCACCAGCCCTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
Protein Sequence
MARNFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQAFVQHHHAAAAHPHHHYPHPHQPWHNPAVSAATAAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00615327;
90% Identity
iTF_00484185;
80% Identity
iTF_00491254;