Dbor016061.1
Basic Information
- Insect
- Drosophila borealis
- Gene Symbol
- ct
- Assembly
- GCA_035045885.1
- Location
- JAWNOR010000315.1:937755-972916[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.7e-27 7.5e-23 80.7 0.0 3 72 1057 1127 1055 1132 0.95 2 3 6.8e-32 7.6e-28 96.7 0.0 3 77 1535 1610 1533 1612 0.96 3 3 4.1e-31 4.5e-27 94.2 0.0 3 76 1803 1877 1801 1880 0.96
Sequence Information
- Coding Sequence
- ATGCGCCTGACAGGGCGCGCTACACTAGCCGAGAAGGAAGTGAACACCCTCAAGGAGCAACTTTCGACTGGCACGcccggcagcaacagcgacagcaacagcgacaacaacaacacagcagAATctgcagcagtagcagcagcagcggcagcagaggcagcagcatcagcagcatcatcattgGCCAGCGGCGAGGAGGAAGCCACTGGCAACAGCGAAAGCGACAGCGACAAGCTGCTGAATAGCTCGATTGTTGCAGCGGCCATAACGCTGCAACAGAACGGCGGCAATCTGCTGGCCAACACAAATACACCGTCGCCATCGCCGCCGTTGCTGAgcgctgagcagcagcaacagttgcagagCAGCCTGCAGAACGGCGTCGGCGGCGCCTGCTTAAATCCCAAGCTCTTCTTCAATCACGCAAAGCAAATGATGATggaagcggcagcagctgctgcagcggcggcagcggcagcccaacagcaacagcagcaacaatcgcCCATGCACTCGCCCGTTGCTGTAGCCAACAACACAattgcagcaactgcaacaaccacaacaacagccgcagcagcagcagcagcagcagtggcagcaacacAACATCAATCAGCACGAGATGTTGCCGAGGCAAcagccagcagcaactgtATCGATGATgacgaggacgacgacgaggaggaTGCATCGATGCAATCGAATGTCGCGCATGCCGATGGTGATCTAGATGACGATGATATGGAGCTGGAGCCGGAGCATGTGGCTGATACGGGcagtgttgctgctgctgagccaTTGGCAAGAACTGATAATATTGGCGATGCGAATGCAACGCATCTGCATCATCCTGATGGTGATAATGAGGATGTTGCCGATGTTGCTGCCGATGAGCACGAGAATGCGGTCGAAGCTAGTTTAAATGTTAGCaaaaatcacaacaacaacaacaacaatgctgaTAGCAACAATAGCTGTAGTCgaaagaacaagaacaacaacaacaacagtgaaACGCAACATGTTGCACTGCGTGATAATAATGTAAATGAACAACATGTGGCACATAGCGCCGAGGACGACGATTGCACCAATAACAATActaacacaaacaacaacaacaacaatgagaagCGCAAAAAGcgcaacaccagcaacaacaataacaacaacaacaacaatcagccCGCTGTTCTATTAGCTGCCAAAGACAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCTCTGGAACAAACTCACCTGATACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCATATTATGCGTTTGGAAGCGCGCTTGGATAAGCAACAGATAAATGAGGCACTCGCCGAGGCTACTGCATTGGCGGCCGCTGTAAATGCAGCCgcaacaaataataacaatagcaacagcaacaacaataacaacagcaacaataacaacaatcacaGTAGccagagcagcaacaataacaacgtaTTCAAAACAGATCTAACATCGACCCATCAGCACaacgacgatgatgacgatgacgatgacaatGATCATGATAATAAGCTGAGCGATGCCGACGATGATGAGGATATTGACAATAGCGAGCAGCAACATGCCGCCATGGTAAACAATCGGCTCGACGATGCAACCGATAAGAATGATGCCGAGGAGCAGGATGCCGAAATGTCCaatgccacagccacagcggACAGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGACCTGAATGTGCTCAGTCCACAGTCGGCCATTGCCACAGCCGCGgcggccgcagcagccgctgcctgCGCCAACGATCCCAACAAATTCCAAGCTCTGCTTCTGGAACGCACCAAAGCACTGGCCGCCGAGGCGCTTAAGAATGGCACCAGCGATCCAGCCAGCGATGAAatgccgcaacaacaacaagccgtAGACGCAGCAACAGCTGATCATGAGGCagtagaagaagcagcagcaacagcagcagcagctacaggaacagcagctacagctacTGCCAAGCCAGAAACAATGAAAAACATTATGGAAACGCCTGAGCATGAAACATTGGCCGAGTCCAATTTGCAGCCCAAAATCGAAATCTTAGACGCAGATGAGGGAGCCACTGAGACAGCAGCTGGCCAAACGCTGGAAGAGCAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAACgagcacagcaacagcagcagctgcaacagggAGCAAAACGCCaacaatttatcaaaatgCCAGTGcggtgcagcagcaactgttgccgccgccgccaccgcctccgccgccacagcagcaacaacagcaacaacaacaacagcaacaacaacaacactatcaacagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGCATCACAGcaccagctccagcagcagcagcaacagccacaactgcatcaacagcaacatctccacaacagcagcaacagcagcaacagcagcgcagcCGGCAGCGATCCACtgaatcatcatcatcatggcCACCACCATGGCCATTCGCATGGACAGCTTTTGCATGCGGGACACCATCTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAACAGCACGCCAAATAGCACCGCCCAACTGGCAGCAAGCATTGCCAGCACGCTGAACGGCAATAAGTCGCTGTTGCAGGCAGCGGCCGCTGCCAATGTggccgccgctgccgttgccgaggacaacaacaacagtctGACGCCGAACGCGAATGCGGCTGTTGCCGCCGCGGCGATGGCTGCACATGCACAACATGCCGCCGCACTGGGTGCACCCAATTTTCTGCCCAATCTGCCCAGCCTGCCGGCATTCCAGTTTgcggccgcagcagccgctggcCAGGAAGCACGTGCGCATTTTCGGTTTGCGGATGCtgagctgcaactgcagccggGCGTCTCGATGGCCGGCCGACTGGGTGAATCGCTGATACCCAAAGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAATATGCGAATCAGGCGCTCGATACGCTACACATCTCGCGGCGCGTACGCGAGCTGCTCTCCGTGCACAACATCGGGCAGCGTCTGTTTGCCAAATACATATTGGGCCTGTCCCAGGGCACCGTCTCCGAGCTGCTGAGCAAGCCAAAGCCCTGGGATAAGCTGACCGAGAAGGGTCGTGACAGCTACCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGATTCCGGACTGCCACAGTATGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGCCTCGCACACATACTCAGCGAGGCCTCGTCCCTGATGAAGAGCAACGTGGTtgctgcccagcagcagcaggagcatcAGCGTCGCCATGCCGGTGACGATACGCACAGCAACGAGGACAGCAAATCGCCGCCACAGAGCTGCAGCTCCCCCTTCTTTAAGGTGGAGCATCAGatcaaacagcagcagcagcagctgcatgtCTCCGAGCATGCGCAGCGTGAGCAGCGCGAAgcggccgctgccgccgccgccgttgccgtccaccagcagcagcagcaacgcgaGCAGCGCGAACAGCGTGAAGCCGCGCAGcgtgagcagcagcagcgtttgCGTCACGAGGATCTGGCGCAGGACAAAATGGCGCGTCTCTATCAGGAGCTAATGGCGCGTACTCCGCGCGAGGCAGCCTTCCCCAGCTTTTTGTTGTCGCCGTTCTTTGGCGGAGCCGCAGCCATGCCTGGAGCAGCCGGCAATCCATTCCCTGCGGCAATGGCCGCCGATGAGAATATGCGTCATGCATTCGAGCGTGAGATTGttaagctgcagcagcagcagcagcagcaacagcaggcgcAGGCCGCCAGTTTCCCCAACTTTTCCAGTTTGATggcactgcagcagcaggtgcTGAACGGTGCGCAGGATTTGTCGCTGGCCGGCAAGGATATTAAATTGAACGGACAGCGCTCGTCCCTGGAGCagcacagcggcagcagcagctccaagGATGGGGAACGCGGCGACGATGCTGATCGCAGTTTCCCAGCACTGCCGCATGTACGCAAATCCGAGGGCGGCAACACGCCTGCACCGCCAGCATTACCAGCACCACCCGCcgcagtcagcagcagcaatccgAATGCCGCGACAGCCGCAGCCGTTGCCAGCGGCCATGGCAGCAACTCGGCGGCACCCAGTCCATTGAGCAACTCCATACTGCCGCCGGCTCTGAGCAACCAGGGCGAGGAGTTTGCGGCGACAGCGAGTCCCCTGCAGCGGATGGCATCGATAACCAATTCGCTGATCACACAGCCGCCGGTTACGCCGCATCATTCACAGCCACAGCGGCCCACAAAGGCGGTGCTGCCACCCATTACCCAGCAGCAGTTCGATATGTTCAACAATCTGAACACGGAAGACATTGTGCGGCGCGTCAAGGAAGCGCTCTCTCAGTACAGCATCTCGCAGCGGCTATTCGGCGAATCCGTGTTGGGTCTGTCGCAGGGTTCCGTGTCCGATCTGCTGGCCAGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGCCGAGAGCCGTTCATACGCATGAAAATGTTTCTCGAGGATGATAATGCGGTGCACAAGCTGGTCGCCAGCCAGTACAAGATAGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGCCCTCAGATGCCGCAGGGACTGGCCAACAAGATGCAGGCCACGCTACCCATGCAGAAGATGATGAACGAACTGAAGCTACAGGAGCCAGCCCAAGCGCAGCACATCATGCAACAGATGCACGCAGCGGCCGCGATGTCAGCGGccatgcaacagcagcaacaggcagcGGCCGCCCAAGCCGCCGCCGTGCAGCAGGCCCAGGCCCAAGCCCAGGCACAGcagagccagcagcagcagcaggcccagcagcaggcacagcagcagGCACAGCTACTGCATCATCAGAATATGCTGCTGACATCGCCGGGTTTGCCGCCACAGCATGCGATCAGTTTGCCAGCGGCCAACACGCCCGGTGGCCAGCCCGTTGGTAATCCGGCTGCAGCCTCCACGCCGGTCAGCGGCGAGAAGAAACCGATGATGATGCCGGTGCATGGTGGAGCACATGCGCCGAATGCCATGCGCAGTCTGCATCAGCATATGTCGCCAACCGTATATGAGATGGCCGCATTGACACAGGATCTGGACACGCACGATATAACCACCAAGATTAAGGAGGCGCTGCTCGCCAACAACATTGGCCAGAAAATCTTTGGCGAGGCGGTGTTGGGGCTATCGCAGGGCTCCGTTTCGGAGCTGCTTAGCAAACCGAAGCCTTGGCACATGCTCTCCATCAAGGGTCGCGAGCCGTTCATCCGCATGCAGCTTTGGCTGAGCGATGCCAACAATGTGGAGCGTCTGCAGCTGCTGAAGAACGAGCGACGGGAGGCGAGCAAGCGCCGACGCAGCACCGGGCCCAATCAGCAGGACAACAGCAGCGATACGTCGAGCAATGATACGAACGATTTCTATACGAGCAGCCCGGGTCCGGGCTCGGTGGGTTCATCGGTGGGCGGTGCACCGCCCAGCAAGAAGCAGCGTGTGCTCTTCTCCGAGGAGCAAAAGGAGGCGCTGCGCTTGGCATTTGCCCTCGATCCGTATCCAAATGTGGGCACCATCGAGTTTCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAATCACCGCATGCGGCTCAAGCAGCAGGTTCCCCACGGCCAGCCTGGCCAGGACAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTTGATCCCGTCCAGTTTCGCATactgctgcagcagcgtcTCGTCGAGCTACACAAGGAGCGCATGGGTCTGAGTGGTGCGCCCATACCATACCCACCGTACTTTGCCGCCGCTGCGCTGCTTGGACGCAGCCTGGCTGGCATACCGGgcgctgcagcggctgctggtgcagcggcagctgcggctgctgcggtcGGCGCCGCCGGCGGTGATGAGTTGCAGGCACTGAATCAGGCCTTCAAGGAGCAGATGAGCGGACTGGATTTGTCGATGCCAACGCTGAAGCGCGAGCGCACCGATGACTATCAGGATGAACTGGAGCTGGATGCCAGCGCTCACAATATGAGCGACAACGAGTCCATTGAGGGCAGCCACGAGCCGGAGAGCACGCCCATATCCGACTATGAAAAGGCGCTGCAAAAGTCCGCGCTCGCTtcagccgccgccgctgccgcctaCATGAGCAATGCGGCGCGCAGTTCCCGTCGCAAGCCGGCGGCACCACAATGGGTCAATCCGGCGGCCGCTGggacgccagcagcagctggcgcagcTATCGCCGCTGTTGGCGGCGTCGCTGccggcgacagcagcagcaacagcgagcGCATCATCAACGGCGTCTGCGTCATGCAGGCCTCCGATTACGGTCGCGATGAGAGCGGCAGCGTCAAGGGCGGCGACTCCAATGCAGATGCGGAGCACGAGGATCATGCGCAGCTGGAGATTGATCAGCGCTTCATGGAGCCCGAGGTGCACATCAAGCAGGAGGAGAACGACGATGACGAACAGTCGTCGCTggcccagctgcagcagccggaCGAGGATGCCTTGCGCCTCGCCAGCGATGCGGACAAGCAGCTAAAGGTCATCAACGAGGAGAAGCTGCGACTGGTGCGCGTACATCGGCTGAGCAGCAATGGTGACGCCGAGGAGCACTGCGCCGCAGCGCAGcaggcgacagcagcagcggcagcagcagcagcagcagcagcggcggcggcgccggcaacagcagcgtGGAACTACTAA
- Protein Sequence
- MRLTGRATLAEKEVNTLKEQLSTGTPGSNSDSNSDNNNTAESAAVAAAAAAEAAASAASSLASGEEEATGNSESDSDKLLNSSIVAAAITLQQNGGNLLANTNTPSPSPPLLSAEQQQQLQSSLQNGVGGACLNPKLFFNHAKQMMMEAAAAAAAAAAAAQQQQQQQSPMHSPVAVANNTIAATATTTTTAAAAAAAAVAATQHQSARDVAEATASSNCIDDDEDDDEEDASMQSNVAHADGDLDDDDMELEPEHVADTGSVAAAEPLARTDNIGDANATHLHHPDGDNEDVADVAADEHENAVEASLNVSKNHNNNNNNADSNNSCSRKNKNNNNNSETQHVALRDNNVNEQHVAHSAEDDDCTNNNTNTNNNNNNEKRKKRNTSNNNNNNNNNQPAVLLAAKDKEIKALLDELQRLRALEQTHLIQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNSNSNNNNNSNNNNNHSSQSSNNNNVFKTDLTSTHQHNDDDDDDDDNDHDNKLSDADDDEDIDNSEQQHAAMVNNRLDDATDKNDAEEQDAEMSNATATADSNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGTSDPASDEMPQQQQAVDAATADHEAVEEAAATAAAATGTAATATAKPETMKNIMETPEHETLAESNLQPKIEILDADEGATETAAGQTLEEQLVNSYWRRGFETSTATAAAATGSKTPTIYQNASAVQQQLLPPPPPPPPPQQQQQQQQQQQQQQHYQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAASQHQLQQQQQQPQLHQQQHLHNSSNSSNSSAAGSDPLNHHHHGHHHGHSHGQLLHAGHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPNFLPNLPSLPAFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQEHQRRHAGDDTHSNEDSKSPPQSCSSPFFKVEHQIKQQQQQLHVSEHAQREQREAAAAAAAVAVHQQQQQREQREQREAAQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFGGAAAMPGAAGNPFPAAMAADENMRHAFEREIVKLQQQQQQQQQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLEQHSGSSSSKDGERGDDADRSFPALPHVRKSEGGNTPAPPALPAPPAAVSSSNPNAATAAAVASGHGSNSAAPSPLSNSILPPALSNQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMHAAAAMSAAMQQQQQAAAAQAAAVQQAQAQAQAQQSQQQQQAQQQAQQQAQLLHHQNMLLTSPGLPPQHAISLPAANTPGGQPVGNPAAASTPVSGEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERTDDYQDELELDASAHNMSDNESIEGSHEPESTPISDYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAAAGTPAAAGAAIAAVGGVAAGDSSSNSERIINGVCVMQASDYGRDESGSVKGGDSNADAEHEDHAQLEIDQRFMEPEVHIKQEENDDDEQSSLAQLQQPDEDALRLASDADKQLKVINEEKLRLVRVHRLSSNGDAEEHCAAAQQATAAAAAAAAAAAAAAPATAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00495757;
- 90% Identity
- iTF_00563076;
- 80% Identity
- iTF_00490681;