Dboq010618.1
Basic Information
- Insect
- Drosophila bocqueti
- Gene Symbol
- hang
- Assembly
- GCA_018151655.1
- Location
- JAECXF010000004.1:1395181-1404693[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.18 14 6.4 1.0 3 23 298 319 297 319 0.93 2 13 0.58 44 4.8 3.1 3 22 427 446 425 446 0.89 3 13 0.033 2.5 8.7 0.1 2 21 578 597 577 598 0.93 4 13 0.00044 0.034 14.6 0.2 2 23 727 749 726 749 0.95 5 13 0.0013 0.097 13.1 0.1 1 23 757 780 757 780 0.96 6 13 0.00018 0.014 15.8 2.9 2 23 972 994 971 994 0.97 7 13 0.014 1.1 9.8 0.2 2 23 1003 1025 1002 1025 0.95 8 13 0.0014 0.1 13.0 0.1 1 23 1038 1061 1038 1061 0.97 9 13 8e-05 0.0061 16.9 1.1 1 23 1131 1153 1131 1153 0.99 10 13 0.0012 0.094 13.2 0.9 1 23 1161 1184 1161 1184 0.96 11 13 0.17 13 6.4 0.4 2 19 1192 1209 1192 1210 0.93 12 13 2e-05 0.0016 18.8 1.4 3 23 1294 1314 1293 1314 0.98 13 13 0.0032 0.24 11.9 0.1 1 23 1349 1371 1349 1371 0.97
Sequence Information
- Coding Sequence
- ATGGGAATGGGAATGGGCCAGGGCCAGGGCCTGGGCATGGGAAGCGGGAAGAGGCCAGCGGGAACGGACGGCAGACAGCGGGAACGGGACGGAGACCCTGGCCGGGCTCAAAATTCGAGTGGTTTCACCTTGGGCACCAGATTACCTGGCCTGGGCCTGGGTCTGTTGGGATGTCAATATTTCTACATTGGCTTTGGCTTCTTTGGCATCTCCTTGTACATCATCTTCTTCTTCTTCGCTTGGCCATGGCCACGGCTGGGCTCCTCCTGCGACCCGCATCGAATTTCATCCATCAGCCTCCAGTCTCGCTTCTCCATTTTGTGGCACTCTTGGATCACCTCACAGGATCGACTGTCGCTGCACATATGCCACGCCTGCATCAGCTACCTGAACTCGTGGCAGAGCTTCAAGAACCGCTGCCTCAGCTCACAGACAAAGCAGCGCCAGTGGCTGGACACCAGCAGCAATAAGAGCAAGCTCTTCAACTACCTGGACCTGAACAGTGCCGAGAACGTCACAGCCACAGCCACGGCTACGGCAACGTCCACGTCCACGTGCAATCCTCCGGGCTCTGGCTCTGCATCTGCATCAGCATCCGCATCCGTGTCCACTGCGGCTGCTCCGCTGCTCATGCCGCCGCTGCCAGCGTTGCCCATCAAAGATGAGCCCATTGACGACACGGACGACGACTACCAGATGAAGATGATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATATGCCGTTGATGGCCTCGGACTATGACTACACGGCTCAGCATTCTCTGGCCGTTGCCGCCGGACTGCCACCGAATGCGGTGGCCAATGTGGCCGCCGCCGGGGATTCCAAGGTGGCCAGCTGCCGGGCCTGCAGCCTGCAGTTCTCCACCCGAGCCAATGCCCGTCGGCACGAACGCAATCTGCACCCGAACCTCTTCCAGCTCTCCACGGACTCGCTGCACAACACGACGGTGACGAAGCCAACGCCCGCCTTGGCTGCCGCATTGGAAATGCAGCGAGCGGCAGCAGCGGCTGCCACCGCAGAGGCAACGCGTGCTGTGGGCGCTGCGGGGGGAAATATAACGCCACAGAAATACCGTCAGGTGGTGATGAATGCGTTCATCAAGTGCGAGGGCGGCGGCTATGACTATGAGAATCCGGAGCAGTATCGGCCGCTGCTCAGCCACGACAAGGTGGAGTTCATCGAGCAGAACGAGGAGTTCCTCGAGCAGTACCAGACGATGACCTGCCGCTGCTGCAGCAAGTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCGCTGCTGCCGCGCAACCTGTGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCGCTGTTCATCTCGCATCTCAAGAAGCGCAACTGCATCAATCTCTACAGGGTTTTGAATGCGCTGCGCGGCAAGGCACCAGCAGTGCTTTCCATCGCGGATGCAGATGGGGAGGGAGATGAAGCGGTGCCTGATGATGCAGCTACAGTTGTGGCTGTGGCAGATGCCGGTGCTGGCACAATGGCCAGTCCCACGGTTACCATTAGCGGAGGAGAGACCACCGGCACAGGCGGGGCGCCACTCCCAGCGGCGGGCTTCCGCACCAAGCACGAGTTCCGCACCCACGTCTACGACAAGCACGCGGATGTGCAGCGCAAGGACAACAACTCGATTCAGTGCAGCTTCTGCGGCATGGACTTTGCCGATCCGGTGGACAGGCGTCGCCACTACAACAACATGGACTGCATTGTGCGGCTGCGCTGCATGACGTGCGATGCCAAGCTGGAGACGCACCAGCGCTTCCTCGATCACGTCTACCAGGATCATTTGGGCGGCGTGGGCGGCAGCGGCCTGGCCAGAAGCAACAGCATGGAGCATTCGCCGGGCAAGAGGAGTCTGCTGGGTGCTTTGGGAATTGGCGTTGGCGGTGGCGTTGGCTCATCGGCGGAAGAGTCGCGCAGCAGCAGCAGTGTGGCGCCCACGCTGACATCCACGCCCAAGCCACAAGCGGCCACAACAACGGGAGGAGGAGCTGGAGCCGCTCCCAGTTCAACAACAACGAATCAACGTGCTGCTGCTGATGCCGCACCCAAATCCCAGTACTTTTCGCGAATGCCCCAGGTGTGTCCCATTTGCGGACAGCAGTACAACAACTACAACAACGTGCTGCGCCACATGGAATCGAAGCACCCGAACAAGCTGCCCGAGACATATAAATGCGTGCGCTGCGGCCTGGGATATCCGCGAATCTCGTATCTGCGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGGCACTCGGGCGGCTTCGAGTACATTGTGAATGCGGATGCCGTGAAGCTGGCGGATGGCAGCACGCCGAATGTCTACACCGGACGCTACGACTATGTGATGAAGGATCTGATGTCGATAACAAATGGTGGGACCCTCGACGAAGATGAGGAGGAGGCGGCAGCAGGCGGCAGCGTGGCCAAGAAGATCCGCCTGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAATCACATGCGCTCCCATTACACAGCCGCCAGTGTGGTGACCGCAGCTCTGGCGGCCGCCAATCGCATGACACCCAAATCACTGACCATAACAGCCACGCCAGCAGCGGCGGAGGCAAGTCCAGAGGCATCTTCTAACCCGGCGGCAAGCAGCAACGTTGTGCCGCCCGCAATGGCCAATCAAACGCCCCAGGAGCAGGCCGTATTTCGTAGGAGTTTGGATCAGGCGGCCGACCGTCGCTTCCGGCGAATGCGTTGCCGCATTTGCCAGCGGCGCTTCAGCTCGAAGAAGTCCTATCGCTACCACATGCTGACGGACCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCGGAGTTCGCCTACGAGAAGGGCCTGAAGGTGCATCTGTTCAAGGTGCACGGGCGGGCGATCAAGGACGAGATGATCATCAAGCAGTTTGAGTGCGAGGTCTGTTCGATTGTCTACAGCTCGGAGCTGGAGCTGCAGCAGCACAAGCGGAGTGTCCACAAGTTAACCTCTGCATCGGCCTCTGCCTCTGCCTCGGCCTCTGCCTCTGCTTCCACTTCCTCGAAGATGGAGGATGACGTTTTGATGGAAGAAGAAGGCGGCGGCGGCGGGAAGCCAGCAGTTGCAGGCGCAGATCAACAAGCCGGCGATCTGTCCACCGCGTCGTCGGCGGCGGCTGGACTGGGAGTGGGTACGCCGCTGTACTGGTACCAGTGCAAGTACTGCCCCTCGAACTTCAACACCAACAAGAAGCTGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAATGACTACTCGTGCAAGGATTGTGGCAACGTCTACAGCGGACGCAAGAGTCTATGGGTGCATCGCTACAAGAAGCATCCACAGGTGCCAGACCCCGCCGAGTGCTCGCTGTGCCGCAAGGTCTTCTTCGATCGCCAGATGCTGGACAATCACACGCCCACCTGCAACCGCAAGCCCATCACCTCGACAGGTGCCCACCAGCAGCAGGATTCTTCGCTGCAGCAGCAGCAGGCGGCACTGCAACGCGCTGTTTTCCGTCACAAGACGGGTGACGATGACGACGATGAGGAGGGAGATGATGGCCAGCAGCTGGAGGAGGGCGATAGCAATGGGGCAGCGGCAGCTGTGGCAGCTTCTGTCCAGGCTGCTGCTGCTACACTGAAGATTCGCATACCGGAGGTGGCCTGCACCATTTGCGGGGCGCGATTCACCGACCAGGAGCACTTTAGCAAGCACATCCAGAAGCATGAGCAGGAGCTGTATGTGGACAATCCGCTGGCGGCGATGTTCGACGATGGGCCGGCGGATGCCGGGCAGTTCCAGGTGGAGCGGCAGAATGAGAATGGGGAATATGCGTGCGATTTGTGCGCGAAGACGTTTCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGGTGAGCGTTTTTCGGCTTGTGCAGCGAGGAGGAGGATGA
- Protein Sequence
- MGMGMGQGQGLGMGSGKRPAGTDGRQRERDGDPGRAQNSSGFTLGTRLPGLGLGLLGCQYFYIGFGFFGISLYIIFFFFAWPWPRLGSSCDPHRISSISLQSRFSILWHSWITSQDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLDTSSNKSKLFNYLDLNSAENVTATATATATSTSTCNPPGSGSASASASASVSTAAAPLLMPPLPALPIKDEPIDDTDDDYQMKMIDESDDMVDPTMFLERSEHEGDMPLMASDYDYTAQHSLAVAAGLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSLHNTTVTKPTPALAAALEMQRAAAAAATAEATRAVGAAGGNITPQKYRQVVMNAFIKCEGGGYDYENPEQYRPLLSHDKVEFIEQNEEFLEQYQTMTCRCCSKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRGKAPAVLSIADADGEGDEAVPDDAATVVAVADAGAGTMASPTVTISGGETTGTGGAPLPAAGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGMDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGSGLARSNSMEHSPGKRSLLGALGIGVGGGVGSSAEESRSSSSVAPTLTSTPKPQAATTTGGGAGAAPSSTTTNQRAAADAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDEDEEEAAAGGSVAKKIRLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSNHMRSHYTAASVVTAALAAANRMTPKSLTITATPAAAEASPEASSNPAASSNVVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSELELQQHKRSVHKLTSASASASASASASASTSSKMEDDVLMEEEGGGGGKPAVAGADQQAGDLSTASSAAAGLGVGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKVFFDRQMLDNHTPTCNRKPITSTGAHQQQDSSLQQQQAALQRAVFRHKTGDDDDDEEGDDGQQLEEGDSNGAAAAVAASVQAAAATLKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQVSVFRLVQRGGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -