Basic Information

Gene Symbol
Trerf1
Assembly
GCA_018151655.1
Location
JAECXF010000001.1:11484969-11498654[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.6e-09 5e-06 26.5 0.1 2 45 1782 1825 1781 1826 0.93

Sequence Information

Coding Sequence
ATGGCTGCCATAAATACGGTACCCAAGAGCATACACCTGCCATTGACCACTCTCAGCAGCGCGCCGCGCGTGTTGATGTGCAGCGCCTCCGTGGGCACCGAGGGATCCGTGACTCTGCAACTGAGGGATGCCAACGCCTTGGAGGCAGCCTCAGCCTCAGCCTCAGCCTCTTCGAAGCCAGCGGGAACAGCATCGAGCGGAGCAGCAACAACGTCCACGAATGGCGCTGCAAGTGCGTCAGCGACGACGCTAGACAATGCGCTGACCATTGGCTATCCGGATCCGGAAATGTTGGCAGATGTCTTGGGCACCATTCAGACAGCCTCTCTTAAAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTCGGGGATTGGGATTGGCATTGGCGGGATCATCAGCGTCGAAGCGCCGCGCAAGAATCGCCCCAAATTATCCTCACCGACGCGACACGGTCCCCAGCAGTGTCAGACTTGTTGCAAGATCTTTGGAAATGCCTCGGCGCTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATACATCTGTGCGCTCTGCTCGAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACTCATCGGAACAAGAAGCCTTACGAGTGTAAGGCGGATGGCTGCGGCAAGTCGTACTGCGACGCTCGATCGCTGCGTCGGCACTCGGAGAACCACCATGCCGGCGGAGCGACCACGCCCACCACCACCAGCCAGCAGTCGCTCTCGCCCACCGCCAGCTCGAGCGGGGCGAGCAGCAGCAGCAGCAGCGGCGTGGGTGTGGCCACCAGCTCGCTGAGTCTCTCGCCGGCCACGGCCAGCGGGGATGCCAGCTCCCCGGACGGAGCCACCTGCATCCGCACCTACATCTCCACGGGCAGCTCGGTGGTGGACGCGGCCACCGGCATCGCCTTGTCGGACGAACAGATCAAGGCCATGAACCTGCCGATCAAGACGGGCGTGACCCTGCTATCGCCCACCACTTCGACATCGTCAAATGCCTCCTCCACGGCCTCGTCATCGTCCTCAGCCTCCGCCTCGGCCTCTATCTCGTCGCTCTCCTCGGCGACATCTGGTATAGGTTTGACGGCGGGATCATCGCCATCTGGCGGCGGCACCGTGATAGCCACCAGTTCGCCAGCGCCGACCATCACGCTCAGCGATGGAATGAGCCTCGAGGGCGAGGGCCTGACCCGGGAGCAGCTGGACCTCATCAGCAAGATCATGCAGCAGACGAAGCAGACGAGCGCCCAGGTCACCGTCTCCTCGCCCACCAGCGTCAGCTCCTACAAGATCAACACGAACTCGGCGCCATCGCAGGCCAGGCCACGGACCTGGAACATGCAATTGCTCAACAATGCCCAGAATGTGACGGTCACCGTTGAGGACAACACCGATCTGGTGGCTCCTTCCTCTAGCTCCCCCGTGGAGGTTAAGGAGGAGGAACTTAGTCCCCAGCTTGTGGCCGCCATCAATCCCCACCTGCTCAACATTGTGAAGCTCGACAAGCCCGTCGAGTGCAATCTGTGTCACCGAAAGTTCAAAAACATACCCGCCCTCAACGGGCACATGCGTCTCCATGGTGGTTACTACAAGAAGGATCCGGAAACCAAGCGCAGCGAGAAGAAGGACTCCAGTGGTCCGCCCCTGCAGACGGCCAGCATCGGAGTAAGAGCCCTCATCGAGGAGAAGATCATCAGCAAGCGCAAGGATATGACAAAGGGCTCCTTTGTGGTTCCCGCACCGCCTCACAGCAGCGGCACCACCACCACCCTGCGACGATCCATCAGCGACCTGGAGAGTTTCCTCAATCCAAAGAGCAGCTCCAGTGGACACACCCAGACCCTGACCACTGGCACTGGCACCACCACGGCGGTACTTCCGGCGGCCACCACGATTAAGAGCAGCAATGGTCTCAGCATTCAGCAGATCGGCCTGCCGCAGAGCATCGAGATCTTTAGCGGCAGCCAAAAGCAGGCAAAGACTCTAAATCTGGGCAGTGGCACCAATACCATCACTATAACCACCAACAATGTGCCCACCACCACCACGATGAGCGCACTGACCGCCCTGAAGGCCGGCGGCACCATTAGCGGCATTTCCACGGCCACCAATACGGATCCCAAGGACTCCACACTGATAGAGCTCCTTAAGCGGGGCACACGCATTGCTGTGACTTCAAAGAAGGCCCAGGCCCAGTGCCAAACGACATCCGGTGTGCTGATGACCTCCAGTTCCACGGCCACGCAATCGATGGGCACCCTCACCGAACTAACCACCATTGGCGGGAGCAGTGTCCAGACAGTGGGCCGTCAGATCATCACGAACAACAATCGCACCGTGATCATACCCTCCGACGTCCAGGTGGTGTCTACCAAGAGCAAGTTGAGCAGCCTGAGCAGTCTAGTGAAGAGCACAAGCACCACCTCCAGTTCCACCAATACCAGCTGCTCCTCGAGCAACATCTCGCTGGCTGACGGAACCCCGCTCTCGCTCACCATAGCGCCCAGTCAGGAAGGATCCACTGCTGGTGTTCCGAGTGGGACTGGGGGCGTGATAACCAGCGGTGGCGGCGGTGTCTACACGGTGACCTACACCAGCGATGGCACCGATCTCTTTGACGATGCCGAAGTGTACAACGTGTCCGACACGGAGATGCTGCTGCAGACGGTGGACTCAATGGAGCTGCTCAACGACGACGAGGAGGAGCCGCAGATCAAGAGCGAACATTCCGAGGACTTTGCCCTGCTGAGCGAGGCCGGCGACAGTGAGCACACCCAGCTGGTGAAGCTGGAGACGGAGAGTGGGCAGAGCGGCTGCAACTCCTCCGGGGGAGCGGTAGCGGGAGCCAATACCACGCCGCTGCCCACCTTCCAGCAATTCCATTCCAAGGAGCTGATCATGCAGAACAGTTCGCAGATCCAGGCCATAACCAGCATGCGGGCCAGCGGAAATGGCGCAGGTGCTGGTAATGGCAGTGGCGTCCTCGCCTCCCCGCTCCACTCGCCGCTGGCCTATCCCACGCCGCCGTCGAGCCACGAGAATATGGCCCAGAGTTCGCCTTTCATCGAAGATGCGGCCGCCCAGTTCGTGGATGCCAGCAACACCTTCTTCGGCGACAAGACGGACTTCTCGCACATCTACTTCAAGACGGACGAGGGCCAGGCCACCATCGAGCAGATGAACGAGCACGACAACGAGAAGATCCTCAAGCTCAAGTCGGTGCTGGAGGAGAGCAGCTTCGATCCCTCCATCAAGGTGGAGGACCTGCTCAACGGCACTGACGACGACACCGAGTGCGACCTGCGTGAGTTCGCCGAGACGAATCTCTCGTTCCTGGACGAGGACCAGGAGTTCCTCAACGACTCCCGCAATGCCACCTCTCCGCTCTCGGAGTCCTTCTTCACCAGCGGCATTGGCTCCGCTGAGGATGTGAAGCAGGTTCTGCGCGAAGTGCTGCCAGATGAGAACATGCAGCTGCAGCTGACCAGCGAGCAGCAGGGCGAGAACATAATCGATCTCTACTACCTGCCGGGCCTGGGACTGCAGTCCCAGATGATGCCCAACTCGGAGGACCCCTTGTTGTCCTCCTCGCCCAGGGAGTTTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCGATTTCATGCTGCCCCTGGTGGGAGGACATGGCTTCACCCAAATCTCCTCCGGCCAGACCCAGTACATGGACAATGGTCAGGCCAACATACAGGAAATGCAGCCCCTCAACAGCCTGCTGCAGCCGCTGCTCTACCAAGGAGCCGTCACTACCAATGGCATGGCCGCCGGCGGACAAGAGAGCCTGCTGCCCACCGATTGTCAAATTAATTCCAATCAGAGCCAGACAACCACGACTCTGGATGCCAGTTTGCTGTTCGCCTGCGGTAACACCACCACCACCACCACCAATAGTACAGCCACGACAATGGGTAATAAGAGCCTGCTGGCCTCGGGGCCCTTGCCCGGCACTGTGGCCAATCTGCAGCCGCTGTCGAACCAAACCAATTCCATTCTGAAGCGCCGCCTGCGCTCCAGTGCGCCCCAGGAGACGCACAAGTTCTCCAAGTTTCACACGCTCTCGCCGCACCGCTCCAAGCTGCGCAAGCCCTCCCGCACCCACTATACGCCCGCTCCTATCCTGAATCCGGATCGCAAGGGCACCGGCCTCTACTGCAGCGTCCGCAAGCAGCTGGGTCTGGGCCAGGGTCTCTTCGATGCCTTCGACGACGACTTTGGGGATCCGGTGGGCCTGGTCGACTTCTCCGACGAGTCCAAGGTGAATCTGGGCTCCACTTACCAGGCACAGATACCCAGCTGCCGGCCGCCGGAGGAGGCTGCGCGCGAACCACTCGGCGCCGAGTTGATGTGGAATCCGGAGGTGCAGGAGGACGAGAAGATCCTGATGCGCTACATTGATCTCAGCAAGTCATCGGCCGTGCCCATGGGCAGTCATTCCGAGGAGGTGGCGCTCCAAACGCTGCTCAAGGCCAGGGGCAACTCGGCGGCAGCGGTGCTCACCCTGCTGCAGACGCAATCGGGCGCCTTCCAGATGAAGTGGACGGCCTACGAGCTGGAGCAGTTCCTGCGGGGCCTGGAGAAGCATGGCAAGGACTTTGGCAAGATTGCCAGCGAGCTCCTCACCAAGTCCTCCGGCGAGTGCGTGCAGATGTACTACTTCTGGAAGAAGCTGTGCGTGGACTACAAGGTGTCGCACCTGAAGATGGAGCCGGTGGTGGTGATCACGCCCACCGTGGAGAAGCCCTATGTTTGCGAGATTGCCGACTGCTCAGCGAGCTTCAGTTCGAAGGCGGCGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGACCGCGATCTCGGCCACATCCAAGTCGGAGCAGGGAATTAACGCCATACCAGGTGCCGCCAAGGAGGGCGAGTTTCCCTGCAAGGTGTGCGGCAAGGTCTTCAATAAGGTGAAGAGTCGCAGTGCGCATATGAAGACCCATCGTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCGTCGTAG
Protein Sequence
MAAINTVPKSIHLPLTTLSSAPRVLMCSASVGTEGSVTLQLRDANALEAASASASASSKPAGTASSGAATTSTNGAASASATTLDNALTIGYPDPEMLADVLGTIQTASLKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGIGIGIGGIISVEAPRKNRPKLSSPTRHGPQQCQTCCKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHAGGATTPTTTSQQSLSPTASSSGASSSSSSGVGVATSSLSLSPATASGDASSPDGATCIRTYISTGSSVVDAATGIALSDEQIKAMNLPIKTGVTLLSPTTSTSSNASSTASSSSSASASASISSLSSATSGIGLTAGSSPSGGGTVIATSSPAPTITLSDGMSLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVSSYKINTNSAPSQARPRTWNMQLLNNAQNVTVTVEDNTDLVAPSSSSPVEVKEEELSPQLVAAINPHLLNIVKLDKPVECNLCHRKFKNIPALNGHMRLHGGYYKKDPETKRSEKKDSSGPPLQTASIGVRALIEEKIISKRKDMTKGSFVVPAPPHSSGTTTTLRRSISDLESFLNPKSSSSGHTQTLTTGTGTTTAVLPAATTIKSSNGLSIQQIGLPQSIEIFSGSQKQAKTLNLGSGTNTITITTNNVPTTTTMSALTALKAGGTISGISTATNTDPKDSTLIELLKRGTRIAVTSKKAQAQCQTTSGVLMTSSSTATQSMGTLTELTTIGGSSVQTVGRQIITNNNRTVIIPSDVQVVSTKSKLSSLSSLVKSTSTTSSSTNTSCSSSNISLADGTPLSLTIAPSQEGSTAGVPSGTGGVITSGGGGVYTVTYTSDGTDLFDDAEVYNVSDTEMLLQTVDSMELLNDDEEEPQIKSEHSEDFALLSEAGDSEHTQLVKLETESGQSGCNSSGGAVAGANTTPLPTFQQFHSKELIMQNSSQIQAITSMRASGNGAGAGNGSGVLASPLHSPLAYPTPPSSHENMAQSSPFIEDAAAQFVDASNTFFGDKTDFSHIYFKTDEGQATIEQMNEHDNEKILKLKSVLEESSFDPSIKVEDLLNGTDDDTECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQLTSEQQGENIIDLYYLPGLGLQSQMMPNSEDPLLSSSPREFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDFMLPLVGGHGFTQISSGQTQYMDNGQANIQEMQPLNSLLQPLLYQGAVTTNGMAAGGQESLLPTDCQINSNQSQTTTTLDASLLFACGNTTTTTTNSTATTMGNKSLLASGPLPGTVANLQPLSNQTNSILKRRLRSSAPQETHKFSKFHTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYCSVRKQLGLGQGLFDAFDDDFGDPVGLVDFSDESKVNLGSTYQAQIPSCRPPEEAAREPLGAELMWNPEVQEDEKILMRYIDLSKSSAVPMGSHSEEVALQTLLKARGNSAAAVLTLLQTQSGAFQMKWTAYELEQFLRGLEKHGKDFGKIASELLTKSSGECVQMYYFWKKLCVDYKVSHLKMEPVVVITPTVEKPYVCEIADCSASFSSKAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAISATSKSEQGINAIPGAAKEGEFPCKVCGKVFNKVKSRSAHMKTHRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00605509;
90% Identity
iTF_00490345;
80% Identity
iTF_00490345;