Dboc004365.1
Basic Information
- Insect
- Drosophila bocki
- Gene Symbol
- pnr
- Assembly
- GCA_008042715.1
- Location
- VNJY01003364.1:196209-200374[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 2.9e+03 -2.2 0.2 22 27 21 26 18 28 0.67 2 2 4.3e-17 1.2e-13 50.3 2.5 1 35 327 360 327 361 0.98
Sequence Information
- Coding Sequence
- ATGCAAATATTCAACTGTCTCTCTATTAAGGCAATGCCACACGATGGATTACCCAACTTGATCTGCACTGATTGCAGGGCTAAATTGGATTCCTTTGAGAAATTTCGAATTATGGCTAACAATTCAAATAATGctttgaaagaatttttaaatatatcaaaatctCTGTTACTAGATCCAAACGAACTGGATGATAAGCTTGATGAAATTTTAAAGGCTTCATCGGAGGCTATAGCTGCCAAGGCTCTCACCGAGCTGAGCACATTTTCTAAGGTTAAGTACGAAAACAACAGCAAGGTAGACTCATCCGGCatccatcagcagcagccgttGGACCGGAAGATTGAGATTAGCAATCAAGAGAgcgcagcgcagcagcagcagcatagcTTATATCCAGttggtggtggtggtggatcctccgccgccgccgccgccgccgccgctgattACAAGCTAAAGGCACCCAAGGCGAGTACCAACTCCCTGCAGGATTCTGGCGACAGCTCTGACTCTCACAAACTGGAGATGGACATTACGTCCTCGATTAACGATCGAAAGACCCCGGATAGCCTGAGCTCAGATCATGCAACAGATGCGGCAACCACTCAACTTTGGCAGGCATTGGCTCGATCAGCTGctaAAAGCAAAGAGGAAAATCAAAACCAGGCTACTGAAATAATTCGCAGCATGATGAGCCAGTCTTTCGTGTTTCCGGTTCCGTCAACAGTATCATTTACAAAAGTACCTGAAGAACCAATAGCACTATTAAAGGATCTATCAGAGGCTCAATCCAGCAAATCAAAACCATGTAGAAGAAAACAAAGTTTTCCTACCAAAACCGATTGCATCGATGTAGTTAATGAGAATGTGACTGATACTTACGCCCCTTCAGAAGCAGCAACTCCAGAGGAAAAGAAAGATAAAAGGAACATAAACCTTTTTAATGCCATACCTGGTGCTCAAAAAGATATGTCATGTTCCAATTGTGGCACACTCACAACAACAATTTGGCGGCGAAGTGTTCGAGGCGAAATGGTATGCAATGCCTGCGGATTATACTTTAAGCTGCATGGTGTAAACAGGCCGCATTCGATGAGACGCGATACCATACACACCAGACGCAGGCGTCCTAAAGAATTGGAGCGATCAAAAAAgaAACACAAGCAAATGTCATGTTCTACAATAGAACCAACAAAGCCAGATTTCTTGACGTCTAGGGAAGCCCTTGATATTTCTGGTCTGGTTTTGAATaaatacaaaaaggaaaTGGATGAGTCCGAGGCCGCAGCAGCACTTAAAGATATTCTAATGAGGCGAAAGAAGTCGAATTCTTTGCCGGCGTTTAATGATACCTGTGAAAGTGCGGATCTATCCGCTCCGCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATAA
- Protein Sequence
- MQIFNCLSIKAMPHDGLPNLICTDCRAKLDSFEKFRIMANNSNNALKEFLNISKSLLLDPNELDDKLDEILKASSEAIAAKALTELSTFSKVKYENNSKVDSSGIHQQQPLDRKIEISNQESAAQQQQHSLYPVGGGGGSSAAAAAAAADYKLKAPKASTNSLQDSGDSSDSHKLEMDITSSINDRKTPDSLSSDHATDAATTQLWQALARSAAKSKEENQNQATEIIRSMMSQSFVFPVPSTVSFTKVPEEPIALLKDLSEAQSSKSKPCRRKQSFPTKTDCIDVVNENVTDTYAPSEAATPEEKKDKRNINLFNAIPGAQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSCSTIEPTKPDFLTSREALDISGLVLNKYKKEMDESEAAAALKDILMRRKKSNSLPAFNDTCESADLSAPLNLVSSENNAKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00533461;
- 90% Identity
- iTF_00524783;
- 80% Identity
- -