Basic Information

Insect: Drosophila bocki
Gene Symbol: kipf
Assembly: GCA_008042715.1
Location: VNJY01000477.1:89818-92083[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.4e-05 0.00098 19.3 3.5 1 23 148 170 148 170 0.97

2 8 0.00086 0.062 13.7 1.9 1 23 176 198 176 198 0.97

3 8 0.034 2.4 8.7 0.2 2 23 205 226 204 226 0.96

4 8 2.8 2e+02 2.6 0.9 1 23 268 291 268 291 0.88

5 8 0.0057 0.41 11.1 6.0 1 23 376 398 376 398 0.97

6 8 0.0064 0.46 10.9 1.0 1 23 404 426 404 426 0.96

7 8 1.5e-06 0.00011 22.3 2.7 1 23 557 580 557 580 0.96

8 8 0.033 2.4 8.7 0.5 1 23 589 612 589 612 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.4e-05	0.00098	19.3	3.5	1	23	148	170	148	170	0.97
2	8	0.00086	0.062	13.7	1.9	1	23	176	198	176	198	0.97
3	8	0.034	2.4	8.7	0.2	2	23	205	226	204	226	0.96
4	8	2.8	2e+02	2.6	0.9	1	23	268	291	268	291	0.88
5	8	0.0057	0.41	11.1	6.0	1	23	376	398	376	398	0.97
6	8	0.0064	0.46	10.9	1.0	1	23	404	426	404	426	0.96
7	8	1.5e-06	0.00011	22.3	2.7	1	23	557	580	557	580	0.96
8	8	0.033	2.4	8.7	0.5	1	23	589	612	589	612	0.93

Sequence Information

Coding Sequence: ATGCAGAATGTGTGTAGAACCTGCATGGGCGACTCTGTCACCCTGGTGAATATCTTCTCAGATGTGCGCGATCCGGCGCTCGAGCAGCCGGTGAGGAATCTCTCCTACATCCTGAGTGAGTGCACCAATCGCTCCGTTCGGCGGGACGACTGCCAGCCGCAGTTCATCTGCCTGTCCTGCATCCAAGCTGCCCAGACGGCCTTCAGGTTCAAGCGTCAGTGCGATCGCAGCTACCACCGCTTCTGCGAGCTCCAAAACAAGGATTCCCTTGAGGGAGATCAGGATGAGGATAACCAGCAAGCAATTGCCTCGGAATCGGGGCACAAAGAAGCTCCTAAAGCTAATGATTCCCGACCTGATTTGTCTTCAGGAGCAACCAACAACACACCAATGCTGAGATCACCCGTTGAAACTGGCAGgaCAAAAAATAGGAACAATCGCTTCGCGTGTGTTCATTGCGATAAAACATACAAGAATAGACGTTCCTTAAGTAAACACCTGCTTACCCACACCACCAAGCCGACCCACAATTGTCCCTATTGCCCCAAATTTTTTTGGCGAAAGGATTCCTACAATGGCCACCTTCTTACCCACGGCAAGCGTAGACCGGTTTCCTGCAATACGTGCGCCATGGTATGTCCCGATGCCACTTATCTGGAAATGCATCAGCAGGAGCACAATGAGGAAATGGTTGGAAACAAATGTCCTGTTTTAGAGGCCGATAATGTCGATATAATCAACCAGGAAAACCGCTCAGATGTCATAGCGGAAAATGTCCCAGTGCTGGAAACTGACCACAAGCACTTTTGCGACCTTTGCTCCGTCTCCTTTCTCCTGGAAGAAGACCTCAAAACTCATAGAACGCTAGTGCATGATATCAACATAACGAATACTGCGGAGAAATCCATGATGATTCAGCGcgAGTTGGAACCGCAACGTTTGAACCTTAGCATAGAGAGCAGCGCACTCGAAGATTGTAACATGGAAAGCAGTCAGGATATTTCGGCTTTAAAGCCAGCTGAAAGTGTATTCGATCAGGAGAATATATCACCCTCTTCATTCTTAAGGAATCAAAGCAAGTTACTTAATCCCGTGGCGAAGAGCTTCCAGTTTTCCGAGCCGAAGCACCACTGTCCCATCTGCTCAAAGGCTTTTTTCTTGAGATACATGTTAATGCAACACCTGCACACCCACGACGATTGGGTTCCTCATGCCTGCCGGCAGTGCTCGGCCATATTTATTGAGCGCAACCAATTGAAAATCCATCAGCGCGAGCACGAGGAGAATACAGTCGGGGCCACAGAGCTAGAAGATCCTGACTGGGAGGACAAGGATGTCGACACGGAGGACAATAATATGATCAACGATATAAACGACACGAATCCAGTAGCGGAATCTACCCCTGTATTGCGcGATTGGGAAATAGAAAGTCTGAACCTAAGCCTGGAAAGTAACACCATCGATGATTCTGGCATTCAAAGAAGTGAAGACAATCCGACTTTGAAGCAAAATGAAAGTGGATTCGATCAGGAGACAACTTCATCGGAGCAGAGCGAgaaaccaAAAAAGTTGTCCAAGAAAAAGAGCGACGTGTGTCCCTTTTGCCACTccgaacagaaaaaaaagaacatgcAGCGACATCTAAAAACCCACATTTCAAAGCCGGAACACAAGTGTTCCTTATGTTGGAAATTTTTTACGCGCTCTGATAACTTGACCCGGCACCTGGCACGCGTCCACGCAGAGAATGCTAAGCCCAAACGGTATTCCTGCGGGCTGTGTCCGGCCGTATTCAGCGAGAAGTACATCCTTGAACGGCATAAGCACAATGTGCATGATAATCGGACTTAA
Protein Sequence: MQNVCRTCMGDSVTLVNIFSDVRDPALEQPVRNLSYILSECTNRSVRRDDCQPQFICLSCIQAAQTAFRFKRQCDRSYHRFCELQNKDSLEGDQDEDNQQAIASESGHKEAPKANDSRPDLSSGATNNTPMLRSPVETGRTKNRNNRFACVHCDKTYKNRRSLSKHLLTHTTKPTHNCPYCPKFFWRKDSYNGHLLTHGKRRPVSCNTCAMVCPDATYLEMHQQEHNEEMVGNKCPVLEADNVDIINQENRSDVIAENVPVLETDHKHFCDLCSVSFLLEEDLKTHRTLVHDINITNTAEKSMMIQRELEPQRLNLSIESSALEDCNMESSQDISALKPAESVFDQENISPSSFLRNQSKLLNPVAKSFQFSEPKHHCPICSKAFFLRYMLMQHLHTHDDWVPHACRQCSAIFIERNQLKIHQREHEENTVGATELEDPDWEDKDVDTEDNNMINDINDTNPVAESTPVLRDWEIESLNLSLESNTIDDSGIQRSEDNPTLKQNESGFDQETTSSEQSEKPKKLSKKKSDVCPFCHSEQKKKNMQRHLKTHISKPEHKCSLCWKFFTRSDNLTRHLARVHAENAKPKRYSCGLCPAVFSEKYILERHKHNVHDNRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00527620; iTF_00533374;
90% Identity: iTF_00527620; iTF_00533374;
80% Identity: -