Dboc010715.1
Basic Information
- Insect
- Drosophila bocki
- Gene Symbol
- ZNF212
- Assembly
- GCA_008042715.1
- Location
- VNJY01008099.1:1975-3976[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.85 61 4.2 2.1 1 20 120 139 120 140 0.92 2 10 0.00018 0.013 15.8 0.5 2 23 189 210 188 210 0.97 3 10 0.0002 0.014 15.6 0.9 1 23 236 257 236 257 0.98 4 10 0.00036 0.026 14.9 0.8 1 23 264 286 264 286 0.98 5 10 2.8e-05 0.002 18.4 0.5 1 23 313 335 313 335 0.98 6 10 7e-08 5e-06 26.5 0.9 1 23 341 363 341 363 0.99 7 10 0.00096 0.069 13.5 5.5 1 23 369 391 369 391 0.98 8 10 2.2e-06 0.00016 21.8 0.9 1 23 397 419 397 419 0.97 9 10 1.8e-05 0.0013 18.9 0.3 1 23 423 445 423 445 0.99 10 10 0.0053 0.38 11.2 0.1 3 23 474 495 473 495 0.98
Sequence Information
- Coding Sequence
- ATGTCAACGCACAACGAGCCCGAGGAGATTCAGCCCCACATCCATGTGGAGGACGGACTTTGTGGAACAACCCAGTCGCCCCTTTTTTACTGCGAGAGCTGCGGTAACATTTACGGAGACAATGAGGCTTACGCCAAGGACCACAGTCACCAATCTGGTTGTTGTGTCGGTGGGATCAAGAAAGAGCTTGAGTTTGTAGAGGAGTTCATTTCAGAGGAACAGACCGAGGTTCCAGCAAGTTTAGCCGAGGAGGATAATGAAGAGGAGATCCACGAGGCTGACGTTCCGCTCTGGGAGGTGGTAGATGACTCCATTAAAGCAGAAGAGAACGAGACTGACCCCACCCATTCAGATCGTTACTTTTGCTATGACTGCCACAGCATTTTCGAGAACAGGAGCAGTGCAGAGGACCATGTTTGTCCGCAGGCAGACACCGGCGGTGGTGGCTCTATACAGCATGCAGACGAGATTCCCGCCGGCACAGCTAAACCACCGACACGTCGGAAGTTGCCCAGCGTGGCCGCAAGGACAGACTCCAAGGGTAGTTCACAATCAACTGTTATTAGCTGTGAAATATGCAACACAGTTTTTAGTTCTGCCAAGTTTCTCAAGTTCCATATGCGCATTCATGAAAAGGTGGCTCCCAAGAGCATTCAAGACGCCCTTCCCGTGGGCGCCCATCAGCAGTACAGTAAGCTGGATCAGTTTTACTGCGAGATCTGCAACAAGAGCTTCGACGAAAACCTCCTGACGGTGCACAAGCAAATGCACCAGGAGACCGCCAAAGAGTTCATGTGTGGCATTTGTAACCGGCAATTCTTTAACTCAATAGACTATCAGATGCACCTCAAGATTCACCAGAAGCCGCGCGACTTGGAAGCCACAAGAATGCCCGAACACCGCAGCACTGCAGCTGGCGATAAGGAGAAGCCGGGCTTTCCCTGCCAGTACTGCGAGCGTGTGTTCTCTCGCCCTTATGAAAAGGTTAAGCACGAACGGGTGCACACGGGCGAGAAGCCCTACTCTTGCGAGGTGTGCGGCAAGACCTTCCGTGTCTCGTACTCGCTCACTCTCCATTTACGGACGCATACGAACATACGGCCTTATGTTTGCACGGTATGCAATAAGCGGTTCAAGTCCCACCAGGTGTACTCCCACCACCTGCGTATACACAGCACAGAGCGGCAGTTTGCCTGCGACATATGCTCAAAATCCTTCCGCACCTCGGTCCAACTCTATGCCCATAAGAATACCCACACCAAGCCATACCAGTGTGTTGTATGCAACCGCCCCTTCTCGTCAATGTACGCCGTAAGAATTCACATGCAAACGCATGAAGAGGAGAAGAataaaggaaatggaaaaggcGTAGTACAGGCTTCTACCAACAAGAGCCAACCTTCAGCGGGGAAATTCTGGTGCAGTTCCTGTGGAGCAGAGTATGCACGTATGTTTGCCCTGCGAATGCATATGAAGACGGCTCACGGCCTGACAGAGGAAGTCGTCATACAGCAGGAGGAGAATTCGTCGTCCGCCCTAGAGGATGTCCTTCCCAACGTAGTAGACTCCGAGACAGCGGTGCTTATAGCAGCCGCCGAGGCTGATGCAGCGTACATTAACGCTGTGGTAAACGCTGTAGACGTCGTGGGATCCGTGCCCACATACGAAGAGGTGGCTGTTGAATTCGATGTGGAGAACTTCCACAGTGAGGAAATCATCACGGACTGGCTTAAATAG
- Protein Sequence
- MSTHNEPEEIQPHIHVEDGLCGTTQSPLFYCESCGNIYGDNEAYAKDHSHQSGCCVGGIKKELEFVEEFISEEQTEVPASLAEEDNEEEIHEADVPLWEVVDDSIKAEENETDPTHSDRYFCYDCHSIFENRSSAEDHVCPQADTGGGGSIQHADEIPAGTAKPPTRRKLPSVAARTDSKGSSQSTVISCEICNTVFSSAKFLKFHMRIHEKVAPKSIQDALPVGAHQQYSKLDQFYCEICNKSFDENLLTVHKQMHQETAKEFMCGICNRQFFNSIDYQMHLKIHQKPRDLEATRMPEHRSTAAGDKEKPGFPCQYCERVFSRPYEKVKHERVHTGEKPYSCEVCGKTFRVSYSLTLHLRTHTNIRPYVCTVCNKRFKSHQVYSHHLRIHSTERQFACDICSKSFRTSVQLYAHKNTHTKPYQCVVCNRPFSSMYAVRIHMQTHEEEKNKGNGKGVVQASTNKSQPSAGKFWCSSCGAEYARMFALRMHMKTAHGLTEEVVIQQEENSSSALEDVLPNVVDSETAVLIAAAEADAAYINAVVNAVDVVGSVPTYEEVAVEFDVENFHSEEIITDWLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00613632;
- 90% Identity
- iTF_00527483;
- 80% Identity
- -