Dboc003481.1
Basic Information
- Insect
- Drosophila bocki
- Gene Symbol
- kn
- Assembly
- GCA_008042715.1
- Location
- VNJY01000974.1:45564-70200[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-233 2.3e-229 762.4 0.0 41 384 75 447 63 451 0.98 2 2 7.2e-08 0.0012 17.1 14.8 422 520 452 550 447 568 0.63
Sequence Information
- Coding Sequence
- ATGTTCGCGCCGAGAAGAAGTGCGCGAGTTGCCCAAACGGAAAGCGAAAGCGAAATGACAGCGGGCTTTGTCCATTCAGCGGCGGCAAATCATCATCagcacccacacccacacccgcATCCGAATTCGCACCACCATCTGGGTGACCATAACCAGCATCAGAGACAGGACAATCTTAATCAGGATCACAATCAGAACTTAGGCACTAAGACAATGCGCTGTGAAACGAGTCTGGGCATTGGCCGCGCCCACTTTGAGAAGCAGCCGCCCAGTAATTTGCGCAAGTCGAACTTCTTCCACTTTGTGATCGCCTTGTATGATCGGGCTGGACAACCCATCGAGATCGAGCGCACGGCCTTCATCGGGTTCATTGAGAAGGACTCGGAGTCGGATGCCACCAAGACGAACAATGGCATCCAGTACAGGCTACAGTTGCTGTACGCCAATGGAGCCCGCCAGGAGCAGGATATATTCGTGCGACTCATCGATTCGGTGACCAAACAGGCCATCATATACGAGGGTCAGGACAAGAACCCGGAGATGTGTCGCGTGCTACTCACGCACGAGGTGATGTGCAGcCGCTGCTGTGATAAGAAGAGCTGTGGTAATCGCAACGAGACGCCATCGGACCCCGTCATTATTGATCGCTTCTTCCTCAAGTTCTTTTtgaaatgcaatcaaaattGTCTGAAGAATGCCGGCAACCCGCGGGATATGCGCAGATTTCAGGTGGTGATCTCCACACAGGTGGCCGTTGATGGACCACTGCTGGCCATCTCCGACAACATGTTCGTGCACAACAATTCGAAGCACGGACGGAGGGCCAAGCGACTGGACACCACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTATCCTCCGCTGCCCGTGGCCACGCCCTGCATCAAGGCGATCTCACCCAGCGAGGGCTGGACAACTGGCGGTGCCACCGTGATCATTGTAGGCGATAACTTCTTCGATGGCCTCCAGGTGGTCTTTGGCACTATGCTGGTGTGGAGCGAGCTGATCACCTCACATGCAATCCGGGTGCAGACGCCACCGCGGCATATTCCTGGAGTGGTAGAGGTGACGCTATCCTACAAGAGCAAGCAATTCTGCAAGGGATCGCCCGGTCGCTTTGTCTATGTCTCAGCTCTCAATGAACCCACAATCGACTATGGTTTCCAGCGTCTGCAGAAGCTGATACCCCGGCATCCTGGTGATCCCGAAAAGCTGCAAAAGGAGATAATCCTCAAGCGAGCAGCCGACCTGGTCGAGGCGCTGTATTCCATGCCCAGCAGATCCCCGGGCGGCTCTACAGGCTTCAACTCCTATGCCGGCCAGCTGGCGGTCAGTGTGCAGGATGGCACTGGCCAGTGGACCGAGGATGATTACCACCGGGCCCAGTCGAGCAGTGTGAGTCCGAGGGGTGGTTACTGCAGCAGTGCCTCTACGCCGCATAGCTCGGGAGGATCCTATGGAGCCACGGCGGCTAgtgcagcagtggcagcaactGCCAATGGTTATGCACCTGCACCCAACATGGGCACGTTGTCCTCCTCGCCCGGCAGCGTCTTCAACTCCACGTCAATGTCCGCCGTGTCGTCGACGTGGCATCAGGCGCTCGTGCAGCATCACCATGCAGCGGCCGCCCATCCGCACCATCACTACCCGCATCCCCACCAGCCCTGGCACAATCCGGCCGTGTCAGCAGCCACGGCGGCGGCCGTTTAA
- Protein Sequence
- MFAPRRSARVAQTESESEMTAGFVHSAAANHHQHPHPHPHPNSHHHLGDHNQHQRQDNLNQDHNQNLGTKTMRCETSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYHRAQSSSVSPRGGYCSSASTPHSSGGSYGATAASAAVAATANGYAPAPNMGTLSSSPGSVFNSTSMSAVSSTWHQALVQHHHAAAAHPHHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00517500;
- 90% Identity
- iTF_00517500;
- 80% Identity
- -