Dboc003595.1
Basic Information
- Insect
- Drosophila bocki
- Gene Symbol
- Kdm5
- Assembly
- GCA_008042715.1
- Location
- VNJY01000892.1:675-2174[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-27 4.5e-24 84.5 0.1 2 89 230 313 229 313 0.95
Sequence Information
- Coding Sequence
- ATGTCCGCCAAAACCGAGGCGGACAATTCAACAGCCGCCCATTCAGGCGGCATCGGCGGAGGCGCCAACAGCAGCGGCTCGTCCTCCGCCGGCGGCACAGCGTCCGCCAACGGAACAGCGACCCCAGCGCGTCGCCTACGCACTCGCAACTCAACCGGCCACGGAGCAGCCAGCGGCGGAGAGTCCGCCAAGAAATCAAATGTCAGCGATGATACTTCCTCGGCTCCTGTCACCCCGGCAGGTGCCCATATCACGGCCGCTGCAACCGGCCCCACGACGGTGATTGAACGGCCCATGCCCAGTGTACCAATGAAccatgccagcagcagcgtaTCGGCCAGCAAGAAGTATCACAACAGTTGCCCACATCCAACTCCCACGCCCCCGTCCGGACACAAGAAGACGGTGCACACGCAGccgcacagcagcaacaagtttGACCAGGGAAAAAACGAAGAGTTTCACTTCGACACTCCGCCAGAATGTCCCGTATTTCGTCCCACTACCGAGGAGTTCAAGAATCCACTGGCTTACATCAGCAAGATCCGATCGATAGCGGAGAAGTGTGGCATCGCCAAGATACAACCGCCGGCCTCCTGGTCGCCACCGTTCGCTGTTGATGTGGACAAGTTGCGCTTTACACCTCGCGTCCAGCGGCTCAACGAACTGGAGGCAAAGACGCGCGTCAAACTAAACTTCCTCGATCAGATCGCCAAGTTCTGGGAACTGCAGGGTTCCTCTCTTAAGATTCCTATGGTGGAGCGCAAGGCCCTGGACCTGTACACACTGCACCGTATTGTGCAGGAAGAGGGCGGCATGGAGCAGACCACAAAGGACCGCAAATGGGCCAAGGTGGCCAATCGGATGCAATACCCTTCCAGCAAGAGCGTGGGCGCCACATTGAAGGCGCACTATGAGCGCATCCTGCATCCCTTTGAGGTGTATACCTCTGGCAAAGTATTGGGTCCCACGccaacagcagctgctggatCTGCAGGCGGTACGCCTGTGAAGCTAGaggacggcggcggcggcaccgACTACAAGGTCCATGAGATACCAACACGACAGCAGATTGCACCGCCCAACGAAAGCAGCACTCGTCGCTCCAAGCGCTTTGGCAACTCCAGCGCCAGTTGTGGCCTAAGCGGTGCCACAACGCCAAAGCCATCGGCTCCTGGTGTTTTCGTCAAGACAGAGACCAAGGAGGAGTTTAAACGGGATCTGCTTAGCAGCTTCAATGCTTCAATAAAtagtggcggtggcggcaatGCGCCTTCTGCTGCAGGCGGGGGCCCTGCGAACACTCGTGGCGCCAACCAAAAAAAGGGACTTGGTGAACCGCCGGCTCTGATTGTCGATCCTTTAATGAAGTACATTTGCCACATATGCAATCGCGGCGACGTTGAGGAATCCATGCTGCTTTGCGATGGCTGCGACGACAGCTACCACACCTTCTGTCTGCTTCCGCCTTTGACCAGTATACCAAAAGGTGAGTAA
- Protein Sequence
- MSAKTEADNSTAAHSGGIGGGANSSGSSSAGGTASANGTATPARRLRTRNSTGHGAASGGESAKKSNVSDDTSSAPVTPAGAHITAAATGPTTVIERPMPSVPMNHASSSVSASKKYHNSCPHPTPTPPSGHKKTVHTQPHSSNKFDQGKNEEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKIQPPASWSPPFAVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPTPTAAAGSAGGTPVKLEDGGGGTDYKVHEIPTRQQIAPPNESSTRRSKRFGNSSASCGLSGATTPKPSAPGVFVKTETKEEFKRDLLSSFNASINSGGGGNAPSAAGGGPANTRGANQKKGLGEPPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00617418;
- 90% Identity
- iTF_00617418;
- 80% Identity
- -