Dbir017411.1
Basic Information
- Insect
- Drosophila birchii
- Gene Symbol
- pnr
- Assembly
- GCA_008042755.1
- Location
- VNKA01002581.1:192547-196516[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9 1.2e+04 -4.0 0.4 22 26 253 257 251 259 0.63 2 2 8e-17 2.5e-13 49.4 2.5 1 35 635 668 635 669 0.98
Sequence Information
- Coding Sequence
- ATGCAACTTCGTCAAGTTTGTCGATTGTGCCTCACATTGGTTAACGAGAACTACATTGAAGAActacaaatttataatgtttCAACGTCGCATAACAGTGCGCCGCAGGACAGAGCTGAGCAGCAGAAGGCGGCGGCCGAAAAGcgtgctgctggctgcttctGCAAGGCTCGGGCTCTGAGCCCCAATCTGTGCAGCTGCCTCGGTGATAACTCGCTATCAGTACCAGAAACGGGTCCAagccaatcccaatcccaatcccttCACCAAACACATTACAACACACCAAGTGTGCCTTCTGCTGCGGGAACAATATCGAGTGGCAGTGAACAGGAAGCGTACGCTAAGCCTTTTGCCAGCAAGAGCCAATTGGAGTTGTCGGACATCGCCGAAAGATCAGTATTCAAAAGTCAGTCATCGCCGTCGTCGACGGCGACGTCGTCATCATCGACGCAGGTagcgcaacaacaacaacaccaacaacagcagcagcaacaacatgaAAATATTGCATgcagagaaggagaaggaaaatCATCCAAGACGGAACAACTCCCGAGGGAGGAACGTTCACTACATAATCAACGCGATTTCGCTGCCGAAAACCCAAATGTGAAAACCAAAATAAGCAGCAGAACAGATAACTACGGCCAAGAGCGCAGCGGAGCAGATGATGATTCATCACCACATCTTACATTTCAGATATTCAACTGTCTCTCTATTAAGgcAATGCCACACGATGGATTACCCAATTTAGTCTGCGCTGATTGCAGGGCTAAATTGGATTCCTTTGAGAAATTTCGAATTATGGCTAACAATTCAAATAATGCtttgaaagaatttttaaatatatcaaaatctCTATTACTAGATCCACACGAGCTGGATGATAAGCttgatgaaattttaaaggCTTCATCGGAGGCTATCGCTGCCAAGGCCCTCACCGAGCTGAGCACATTTTCTAAGGTTAAGTACGAGAACAACAGTAAGCTAGATTCAACCAGCATCCATCGGCAGCAGCCGTTGGATCGCAAGATTGAGATTAACAATCAGGAGAgcgcagcgcagcagcagcatagcTTATATCCAGGCTTATTCAAAGCAATAACCATGAAAGGCGATCAGTTTATTGCACATAATAAGAAGGTAATGCCCGGATCATCCTCCtcgcacagcagcagcagcagcaagtctGCGGATATCGAAAAGTATGAAAACCTACAGCAACAGCTCGAGACGGCAGCCGTTCTGATGGATATAAGCAAAAAGATTGTTATTTCGCCTCCATGCTCGAATCCGCAATCTCCGTGCTTTTCTGCTGCAGTAGATACAAttggtggcggtggtggcggtggatCCTTTGCCGCCGCCGATCACAAGCTAAAGGTACCGAAGGCGAGCACCAACTCTCTGCAGGACTCTGGCGACAGCTCCGATTCTCACAAACTGGAGATGGACATCACGTCCTCGATTAATGACCGAAAGACCCCGGATAGCCTGAGCTCGGATCATGCAACAGATGCGGCAACCACTCAAATTTGGCAGGTTCTGGCCCGACAAAATGCTAaaagcaaagaggaaaatcaaaatcaagctACCGAAATATTTCGTAGTATGATGAGCCAGTCTTTCGTGTTTCCGGTTCCGTCAACAGTATCGCTTACAAAAGTACCTGAAGAACCCATAGCACTATTAAAGGATCTATCAGAGGCTCAATCCAGCAAATCAAAACCATGTAGAAGAAAACAAAGTTTTCCTACCAAAACCGATTGCATCGATGTAGTTAATGAGAATGTGACTGATACTTACGCCCCTTCAGAAGCAACTCCAGACGATAAGAAAGATAAAAGGAACATAAACCTTTTTAATGCCATACCTGGTGCTCAAAAAGATATGTCATGTTCCAATTGCGGCACACTAACCACAACAATTTGGCGGCGAAGTGTTCGAGGCGAAATGGTGTGCAATGCCTGCGGATTGTACTTCAAGCTGCATGGTGTCAACAGGCCACATTCGATGAGACGCGACACCATACACACCAGACGCAGGCGTCCTAAAGAATTGGAGCGATCAAAAAAGAAACACAAGCAAATGTCATGTCCCACAATGGAACCAACAAAACCAGATTTCTTGACGTCTAGGGAAGCCCTTGATATTTCTGGTCTGGTTTTGAATaaatacaaaaaggaaatgGATCAGTCCGAGGCCGCAGCAGCACTTAAAGATATTCTATTGGGGCGAAAGAAGTCGAATTCTTTGCCGGCGTTTAATGATACCTGTGAAAGTGCGGATCTGTCCGCACCGCTTAACCTTGTTTCCAGTGAAAATAATGCAAAGTTAACATAA
- Protein Sequence
- MQLRQVCRLCLTLVNENYIEELQIYNVSTSHNSAPQDRAEQQKAAAEKRAAGCFCKARALSPNLCSCLGDNSLSVPETGPSQSQSQSLHQTHYNTPSVPSAAGTISSGSEQEAYAKPFASKSQLELSDIAERSVFKSQSSPSSTATSSSSTQVAQQQQHQQQQQQQHENIACREGEGKSSKTEQLPREERSLHNQRDFAAENPNVKTKISSRTDNYGQERSGADDDSSPHLTFQIFNCLSIKAMPHDGLPNLVCADCRAKLDSFEKFRIMANNSNNALKEFLNISKSLLLDPHELDDKLDEILKASSEAIAAKALTELSTFSKVKYENNSKLDSTSIHRQQPLDRKIEINNQESAAQQQHSLYPGLFKAITMKGDQFIAHNKKVMPGSSSSHSSSSSKSADIEKYENLQQQLETAAVLMDISKKIVISPPCSNPQSPCFSAAVDTIGGGGGGGSFAAADHKLKVPKASTNSLQDSGDSSDSHKLEMDITSSINDRKTPDSLSSDHATDAATTQIWQVLARQNAKSKEENQNQATEIFRSMMSQSFVFPVPSTVSLTKVPEEPIALLKDLSEAQSSKSKPCRRKQSFPTKTDCIDVVNENVTDTYAPSEATPDDKKDKRNINLFNAIPGAQKDMSCSNCGTLTTTIWRRSVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKELERSKKKHKQMSCPTMEPTKPDFLTSREALDISGLVLNKYKKEMDQSEAAAALKDILLGRKKSNSLPAFNDTCESADLSAPLNLVSSENNAKLT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00478378; iTF_00613170; iTF_00527704; iTF_00594909;
- 90% Identity
- iTF_00478378;
- 80% Identity
- -