Dbir005017.1
Basic Information
- Insect
- Drosophila birchii
- Gene Symbol
- Gata6
- Assembly
- GCA_008042755.1
- Location
- VNKA01005958.1:304981-308080[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 5.9e+03 -2.9 1.6 1 6 294 299 293 314 0.63 2 2 1.7e-17 5.2e-14 51.6 6.9 1 34 346 378 346 380 0.97
Sequence Information
- Coding Sequence
- ATGGTTGTGATGGAAGTGGAAGTGCTGGAGGAGACCAGCCAGGCGGGCGTCAGCGAGCCGGAGGAGCAGTACGTGGTGGTGCCGCGAATCCAGAGGCGCATCCTTACCACAGCGGGCACACTTGAACTAAACGAGGCGCGAGAAGGAGAGCCGAGTACAAACGCTAGCAACGCCAGCTCGGGATCCGCGCCCGATAGCCACATCGAGTTCCAGCGGAGTTCGCACCACTCGCCCGGGGCCACTCACTACGTTCAGATGGCTCCCCGCAATGCTGAAGTGCCGGAGCAGGTGACCACGGCAGCGGGAGCACCTGCGGGCACCCTATACGCATACTCCACCGGGCCAATCATTTGCAGCGGGGACGATGATGGACGCTTTGGCACCGCCGGACCTGAAACCTCCACAACCAGTTTATACTACGATGCGCCTGTGGTGGAGGGCACTGTCCATGCCAACGAGTCCAAGACATATGCGGACCTGGGCAACGCCTACGCCCCCTTTCcgcccagctccagcttcagcagcaacagctacGCGGCCGCCCTGCAGCAGACCAACACCATCTACACCGTGCCAGGAACTGGGCAGTTCCTGACCAAGTCGGAATCCGGACTCAACTCGCTACGTCAGGCCGGACCAACAACCTTCCAGACGATCTCCTTTCCCGACAGTGGCAATACCATCGAGACTCTGTGGACGTCACAAGCTCCGCCGGAATACCAGAACGTGTCCTTCGGCAACTTCCACCCACAGGTGATCGACGAGTATGCGTCCGGCAACATGCCCACCACCCACTGGTCACCTGCCGGCGGGATCGGCCAGTACGATGCCAGTTTGGTGACAGCCTCGGCCACGTCCTCACCAAACCACGAGCTCAAGTGTGAGAGCTGCCACTCGCCTTTCATGCGTAAAGGCACCTCCGAGTACTTCTGCCCCAACTGCCCGCCCTTCATGCGGATGCCACCGAGGATGCCGCAACGGCAGGCGAAGCCCAAGGCTGCCGCCGCCCCAAACAACCGGCGCAATGGGGTGACCTGTGCCAACTGTCAGACCAACTCGACGACTCTGTGGCGTCGCAACAACGAGGGTAATCCCGTGTGCAATGCCTGTGGGCTGTACTTTAAGCTGCACAATATGAACCGGCCGCTGTCAATGAAAAAGGAAGGCATCCAAAAGCGTAAGCGCAAGCCGAAGAATAACGGAGGAGGACCCATGCACCGGGCCCCGCTGCCAAGCATGGCGCAGGGTGTCAATCTGATGACCAACAGTCCGTTGTATCCGTCCCAGGTGCCGGTGAGCATGCTAGGCGGTAGCCAGCAGAACGCCAGTCCGGAGCTGCACGACATGTCAACGACGGGACCGGCTGGTGGACCCCGGGTAGTGGCCATTCCGCAGAACTCGGCGGCACCGCCCACCTCCGAAGGATCCCTAAACATGTCCGCACGCCACCATGTGACCGGTGAGAGCCACTCGCCGTACAGCCAACAGTCGACGCCACAAAGCCAGTCGCCGCATCTGCCCAGCACGGTGACCATTAATCGCCAGATAGTTCAGCCAGTCACCAGCATTGAGAGCGGGCGCAGTTCCAACAGCGAGTTGACCCCCAGCGTTATCACGCGCACTGGACTGCCGGAGCGATCTTCGAATAATTAA
- Protein Sequence
- MVVMEVEVLEETSQAGVSEPEEQYVVVPRIQRRILTTAGTLELNEAREGEPSTNASNASSGSAPDSHIEFQRSSHHSPGATHYVQMAPRNAEVPEQVTTAAGAPAGTLYAYSTGPIICSGDDDGRFGTAGPETSTTSLYYDAPVVEGTVHANESKTYADLGNAYAPFPPSSSFSSNSYAAALQQTNTIYTVPGTGQFLTKSESGLNSLRQAGPTTFQTISFPDSGNTIETLWTSQAPPEYQNVSFGNFHPQVIDEYASGNMPTTHWSPAGGIGQYDASLVTASATSSPNHELKCESCHSPFMRKGTSEYFCPNCPPFMRMPPRMPQRQAKPKAAAAPNNRRNGVTCANCQTNSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGGGPMHRAPLPSMAQGVNLMTNSPLYPSQVPVSMLGGSQQNASPELHDMSTTGPAGGPRVVAIPQNSAAPPTSEGSLNMSARHHVTGESHSPYSQQSTPQSQSPHLPSTVTINRQIVQPVTSIESGRSSNSELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00541443;
- 90% Identity
- iTF_00492624;
- 80% Identity
- -