Basic Information

Gene Symbol
-
Assembly
GCA_008042755.1
Location
VNKA01005790.1:91347-95421[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00095 1.1 9.6 0.1 21 45 789 811 778 812 0.85
2 2 4.5e-05 0.05 13.8 0.1 23 44 1068 1091 1059 1093 0.87

Sequence Information

Coding Sequence
ATGGGCACTCCGGGAGGCAGCGAGGTGGCGCTGGTGAAGGCGGCAACGCCATCGCCCTCGCCGCTGGCCAAACTTGATGTGGATTACTTGAGCTCCAAGTATGAGATGCATGTTTCGCTGTCGGAGGAGGAGCGTCGCTTCTACCTGAAGATGTATCCCAATGTGGATATTGTGAACCAGCGCCGAGTACACTGCACCGTGTGCCGCCAGCATCTGGGCACCGCTCTCGCCGCCGAGAACAACATAAAGATGCATCCCATACTGCGTGTGACGCATTGCGTCAAGTGCCACGACTTCTACAACAGCGGCGAGTTCTCCAAGGGCGAGGATGGCTCGGAGCTGTATTGCCGCTGGTGCGGGCAGGGCGGCGAGGTCTACTGTTGCTCCACCTGCCCGTACGTCTTCTGCAAATCGTGCATTGTGAAGAATCTTTCCAAGGGCGTCATCGTGGACATTGAGCAGAACGAGCACTGGAACTGTTTCAACTGCACCTCCAAGATTCTCTGGCCCCTGCGGGCCCAGCACTGGGCGCTGGTTAACTACATCCAGTCGACGAAGAAAGCTCTACAATCTATGCAGATGCCCGAGCTGGAAGCTCGCCGCTACATGCTCAAGGACAACACCAACTGCTGTCGCCTGGCCAAGTCAAAAGCAACCAATCTCTCGGAATCCATGGAGAGCCTGGAGTCCAATACATCGAAACGTAGCCAGGGCAGCTCGGCGAACGCGGCAAAGAGAACACTCCCGCCTAAGCCGGGTGCGGGAACGGCAACCAAACGCCCCAAATCCTCCAACGACGAGGTGGTCTGCACACCCGACTTGCTCACCATGCTGGAGCCGGACTGCCAGCTCTCCATGCTCCCCAAGCCGTCGGGCCGTCAGCCAGGGCCGCCGTCCAGTATCACCACCACCCCGCGGATTGTCACCGTCCAACAGAATTACACGGGACCGAGTCCCAGCACCAGTACCAGTGGCACCAGCAATGGCAGTGGCCCCTCCACCTCGATGGGAGCACCACGCACCAGCCTGCCACCGCCATTGGTGCTCAGTGGCTCAGGGATTCGGTATCGTCAGAGTTCGCCGGCCAATGTCACGAATGTGCGACGCACTGTGGTGCCCAATGTGGTGCGCGAAAGTGGCCCTGTGTTTCACACCATCAACGGTTACCGTGTGGATCTGAACAGTGCTGCCCAACAGGACTCCTACCGCCTGCCCAATGGACGACTGATCCAAGTCAAACGCCAAGTGCCGATGGCCAACCCACCGACCGCGGGGCCAACGGCATCAACAGGGCCGATGGTCATCCCTCAATTGAACTCGGGCGTGATCATTCGTCCGCGAGGTCCAGCGCCAGGTGGCAGGCCGCCGAATCAAGGCAACGCCTTTGGCAACAACATGGGCATCTACAATCCGCAGACCAACCAGCAACAGCGGGCGCCGCAAATTGTGCGAATTAGCCAAAACCAGGCGGCCACACCAGCGTCAGCCCCGGCCCCAGCCCCAGCACCGAATGTCAACGGGAgcggaggtggtggtggtggtggacaGACCCTGATGATTACTCCAGTGCCCGGTCCGGCCAAGACGCCAACTCTGGTGCGGCACACCTACCCAAAGACTACGCTGGGACTGGCACGTACCCAGCTGCAGGAACAGATCTTCAGCGCCATGGACATTTGCACCCATCTCACCGGCAAGGTGGTGTCCCTCACCCACTCCAATGCGTACAACCATGTGCGCAGTTACCTGGATCTGAAGGAGCTGTACATTCACATGTCCTACCTGATGACCTACGCCATAGGACGGTTTAAGAATCTGCAGGAGAAGTGTCTGGTGGACATGCGGGAGATGGGCTTCAAGAACGATGCCAATAGTCTGGAGAATGGACAATTGGCTGCCGCCGTCGACTACGTCTGCTATGGCCAGCTGGACGATGTGGATCTCTTCAACACCGGCTGCAACAGCTTCCACAACCAGGTCTATGAGTATCGCAAAAGTTTGCATGCCAATTTGAAGGAGGGCGAGGACTGCGAGCCACTGCCACCGCTAATGCCGCTGGGCGTTCGAGCCGAAGGCGATCCGATCGATGAGGAGGAACCCACTGAGTTGGAGCCAGAACAGAAACTGGTTGCGGACGAGGACGAGGCAAATGATTTGGATTACGATGAGACGGAGGATTTGGATGATGATTTGGACGATGACGATCTGGATAACGAGGAGTGCGGCGAACTGGGCACAGAGGAGAGCATGAATCGCAACGAGCAAGCTCACGCCTATGATCGTAAGCTAACCCGGTTGCTCCGCGAATATCCCTCGCTCTGGTGCACCCGTCATCCGGACTATGGCAAGAAGGAGGTCACTCTTAAGCAGTGGCGAGTGATTGCCACCCATTTTCCCCGCGGCGACGACATCAAGCTGCGCTGGAAGAACGTACGAAAGCGTTACGTGCGAATTGAGCGCCGGCTGAAGCTGGGAAAGCGCTTCAAGGGCTATTTCGACAAGGCCACCAATTATCTGGCCAATAGAGATCGACCCAGAAGCGAGTGGCTGGCGGTGGACTGTGGCGAagacgatggcgatggcttTGAAAGGAAGCAACTGGACGTCATTGAGAATACCATGGAACACAAGGCGGAGCAGAAGGCGTTGCCAGCGCCGCCGCCTCTAAGCAAACCGAAGCCACGTTTTCCAATGCGACCCCTGGAGGTGCGTGCCATTGATCAACGCATCATCACATTCGCCAAGAGCCATCCCGTGCTCTGGCGCAAATCCACCGATCCCGAGTTCAACAGTATTGACGAGCAAACCAGGAAATCTTTGTGGCAGAACTTTTGGAAGTCGGCACCCAATTATGCCTGCGAGTATCTCGTGGAGCGCTGGCAACAGATGTACGAGATGTACAAGTCCTTCCGGCTCAAGAGCATCAAGGACAAGGGCATTTTTGCGAATCTCGAGCTAAAGTATTCCAAGTACTTGGCCAGCCTGTATTTCTTGTACAAAATCGATGAGCAGGACCTGCGTGACGAGTTCGAGCCCCTGCAGGATTGCGTGCCCAATGGCAGCGACATGGCCGGAAAGCTAAAGGACATGCCCGACGACAAGCAGTTCGCCCAGCAACTGGTGCTGGCCATTAGGGCCTATCCCACTCTGTGGAATCCCCGGCATGTGGACTACAGTGATGTAGGAGCCAGGGAGCGCCTGTGGCCAGAGGTGGCCCGAAGATTGCCACGATTCAAGCGGGATGCCAAGGCCTGTAAGCTGCGCTGGCAAATGGCCAAGTTCGCGTACGAATGCTACTGCCGCGAGATGGAGCGGCAACCACCGACGCGGGCCAGCGAACAGAAGCTGCAAAAGATGAGAGCCAATTTCCCACTCGAAGAGATGCGTTTCCTTAACACTTAA
Protein Sequence
MGTPGGSEVALVKAATPSPSPLAKLDVDYLSSKYEMHVSLSEEERRFYLKMYPNVDIVNQRRVHCTVCRQHLGTALAAENNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNEHWNCFNCTSKILWPLRAQHWALVNYIQSTKKALQSMQMPELEARRYMLKDNTNCCRLAKSKATNLSESMESLESNTSKRSQGSSANAAKRTLPPKPGAGTATKRPKSSNDEVVCTPDLLTMLEPDCQLSMLPKPSGRQPGPPSSITTTPRIVTVQQNYTGPSPSTSTSGTSNGSGPSTSMGAPRTSLPPPLVLSGSGIRYRQSSPANVTNVRRTVVPNVVRESGPVFHTINGYRVDLNSAAQQDSYRLPNGRLIQVKRQVPMANPPTAGPTASTGPMVIPQLNSGVIIRPRGPAPGGRPPNQGNAFGNNMGIYNPQTNQQQRAPQIVRISQNQAATPASAPAPAPAPNVNGSGGGGGGGQTLMITPVPGPAKTPTLVRHTYPKTTLGLARTQLQEQIFSAMDICTHLTGKVVSLTHSNAYNHVRSYLDLKELYIHMSYLMTYAIGRFKNLQEKCLVDMREMGFKNDANSLENGQLAAAVDYVCYGQLDDVDLFNTGCNSFHNQVYEYRKSLHANLKEGEDCEPLPPLMPLGVRAEGDPIDEEEPTELEPEQKLVADEDEANDLDYDETEDLDDDLDDDDLDNEECGELGTEESMNRNEQAHAYDRKLTRLLREYPSLWCTRHPDYGKKEVTLKQWRVIATHFPRGDDIKLRWKNVRKRYVRIERRLKLGKRFKGYFDKATNYLANRDRPRSEWLAVDCGEDDGDGFERKQLDVIENTMEHKAEQKALPAPPPLSKPKPRFPMRPLEVRAIDQRIITFAKSHPVLWRKSTDPEFNSIDEQTRKSLWQNFWKSAPNYACEYLVERWQQMYEMYKSFRLKSIKDKGIFANLELKYSKYLASLYFLYKIDEQDLRDEFEPLQDCVPNGSDMAGKLKDMPDDKQFAQQLVLAIRAYPTLWNPRHVDYSDVGARERLWPEVARRLPRFKRDAKACKLRWQMAKFAYECYCREMERQPPTRASEQKLQKMRANFPLEEMRFLNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480108;
90% Identity
iTF_00594485;
80% Identity
-