Dbir001832.1
Basic Information
- Insect
- Drosophila birchii
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_008042755.1
- Location
- VNKA01004165.1:483025-495343[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-10 6.4e-07 29.1 0.0 1 37 307 344 307 348 0.89 2 2 6.5e-19 1.6e-15 56.6 0.0 1 43 654 697 654 699 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGCAATGGAAACACTACCAAGAGCAACTGACGCGCAGCCACTTGAATATCGAGGAGCAACAGCCCATAGCAATAGTTTCCGGTTCCGAGGACGAGCCACCGCAATacaaccacagcagcagcagcagcaaggaccATTGTAAGCCAGAGAAGCACCACCGTTTAGAGCAGTATCACAGCCAGCTTCTGGAGGAAGATTTTGaCAACAACCAAACATCACACGATTCATCACGTACTCCGACACCTGAATCCACAGTGACAGCCACCAGTACACCATCACCACCGCCAGAACCCAACGATTGGAGACCGTCGGCCAAGTGCAATTTCTGTGTTAACGGTCGCCTGCTAACGGTGAACGCCCACGGCGATTTGGTGGCCGAAACAGCAACCACAGTAACAAACATAAATAGCTATAATAGTAATAGCCACATTCATCAGCTCGACAGTGACAGCAACTCGAGCGCATCACTGCCCCACCaaaacaacatcagcagcagtagcagctgcAGCAAGCCGCGACAGATTgctgctgcaacagcaacggcTACTCCCTCTAATTCCCTGGAACTGTACAAGCTGCTGACCCAAAGGGCAGCCAAGATGACATCGATGGACTCAATGGCCGCCCAGCTGGCGCAGTTTTCGCTGCTCGCGGACTTTAACTCAACTTTGATCAACtcgctgcagcaacagcagcagcaacagcaacagatcGCTAGTTCGGTAACGCCAACTACCTCAGAAGTATCTGCAGCCGCAATCAGTCCCGCACTCAAAGATACGAGCAGTCCCAGTGCCGATGCACCGCTCGATCTTAGCAGCAAACCCTCGCCGAACTCATCGATTAGCGGCGATGTCAAGTCCAGCAGAGCCTGTGCCACGCCGACGCCCACGGGAAGACGGTCGTACAGCGAGGAGGACCTGAACCGGGCCCTGCAGGATGTGGTGGCCAACAAGCTGGGCACCCGCAAGGCGGCCAGCCAGCACAATGTGCCCCGCTCCATTTTGGTCAATCGGCTGTACAAAATCCAGCAGCAGGACAGCGACCAGGAGCAATTGGATCAACAAGAGCCGGATGCCGAGGACTCAAACGATGATGGTGAAGCCGAGGTGGACAGCAATGCGTCAACCCCGGCGCCGGGTTATCCGGCGGACTTTGCCCTCCGAAAACTGAGTCACCTGTCGTCCGAACACAATGGCAGCGATCTGGGCGATGACCTTGATCGGGGAGTATCTCCCAAGCTGGGACGGCTTCCCGgtaacaacagcagctgcggcggtggcggtggtggggTCAATGTCAGCGGTAATTCCGAAGGCTTACCCTCTATCCCTCTGGATGCCAAGGTCCTGATGCATACCCTCATGCTGGCCGCCGGCATCGGGGCCATGCCCAAGCTGGACGAATCACAGACAGTTGGTGACCTGTTTAAGACACCGGAGACGAACTCCTCGCTGGATCCAAACGAAGCGGGCGAGGATCCCATATTGAAGATTCCGTCCTTCAAGGTCAGCGgcccggccagcagcagcagcctctcTCCGGGCCTGGTGGCCCAGGCTGGCTACTCCTCCGGAAACAGTTTGCTGCCCTCATCCTCGTCCAGCATACAAAAGATGATGGCCAGCAATATCCAGCGACAGATTAACGAGCAGAGTGGCCAGGATGTACTGAGGAATGGAAGTGCCAGCgattgcagcagcaacaatggcggcggcggaggcagctcctcctcatcgATGGGCTACAAGAAGCCCAGCATATCGGTGGCCAAGATCATCGGCGGCACAGATACCTCGCACTTCGGGGCCTCGCCCAATCTCCTGtcgcagcagcaccatcatcCCGGTCATTCCGGCCACCTcagccaccaccagcagcagcagctagccGCTCAGGATGCGGCGGGCAAGGGCACCCGGCCCAAGAGGGGTAAATACAGAAACTATGATCGCGACAGCTTGGTGGAGGCAGTGAAGGCGGTCCAAAGGGGTGAAATGTCGGTCCATCGAGCGGGCAGCTACTATGGCGTACCCCACTCCACGCTGGAGTACAAGGTTAAGGAGCGTCACCTGATGAGGCCGCGCAAGCGGGAGCCAAAGCCGCAGCCGGATCTGGTGGGTCTGACGGGACCCGCCAACAAGATCCACCTGGACAAGCTGAAGCCGGGCAACCACAGTGGCTCCAAGCTGAGCAATGCCCTCAAGAACAACAGCcaggcggcagcggctgcggcggcggctgcggcagctgctgcggctgccacGCCCAACGGTCTAAAACTCCCCCTCTTCGAGGGCGCCCCTCACCAGCTTCCGTTCCAGTCGAACATGTTCTGGCCCCAGCCGAATGCCACGAATGCCTATGGCCTGGACTTCAACCGCATGGCGGAGGCAATGCGACAGCAGCCACCACAGGGAGCTGGCGGTAATCACCATGGACCCATGAAGAGTGCCCTGGAGATGGCGGAAAATATGTACGATGGCATCATCCGCAAGACGCTGCAGTCCAGCGAGTCATCCTCATCGGGAAATGGCAGTGCTGCCGGCAATGGTAGtagcaatggcaatggccatggccatgccCTCCTCGATCAGCTGCTAGTGAAGAAGACACCTCTGCCGTTCACGAATCAAAGGAGCAATGACTATGCCGCCACCTGTTCCAGTGCCAGTGCGGAGAGCGTCAAGAGATCGGGCAGTCCGATGGGTAACTATGCTGACATCAAGCGGGAGCGCCTGAGCGCcgacagcggcggcagcagcgatgAGGAGCACTCCAGcagacacacaccggccaacaataacaacagcgaTCTGGCGCACAATAAGAACAAGAGCAGcgcctcctcatcctccttcGGCGCCAGTGGCAATGGTCAGGTCAATGTGACTGCCAATGGCAATGGTCGGAGCAGCCGGATGACGTCACGTGACTCGGAGACGGATGCCAGCAGTCTGAAGAGCGCGGAGAGCGGCCACCTCCACCAGCTTCACCACCACCAAAACCACAAAACAATGGATCTCAATGGCAGTCGCATCAAGTGCGAGTCCGAGGCGGAAATGGGCCCATCGGGCAGTCCCATACTGCACGAGAAGCTGGCCCAGATCAAGGCCGAGcaggtggagcagcagcagttatAG
- Protein Sequence
- MGRRQWKHYQEQLTRSHLNIEEQQPIAIVSGSEDEPPQYNHSSSSSKDHCKPEKHHRLEQYHSQLLEEDFDNNQTSHDSSRTPTPESTVTATSTPSPPPEPNDWRPSAKCNFCVNGRLLTVNAHGDLVAETATTVTNINSYNSNSHIHQLDSDSNSSASLPHQNNISSSSSCSKPRQIAAATATATPSNSLELYKLLTQRAAKMTSMDSMAAQLAQFSLLADFNSTLINSLQQQQQQQQQIASSVTPTTSEVSAAAISPALKDTSSPSADAPLDLSSKPSPNSSISGDVKSSRACATPTPTGRRSYSEEDLNRALQDVVANKLGTRKAASQHNVPRSILVNRLYKIQQQDSDQEQLDQQEPDAEDSNDDGEAEVDSNASTPAPGYPADFALRKLSHLSSEHNGSDLGDDLDRGVSPKLGRLPGNNSSCGGGGGGVNVSGNSEGLPSIPLDAKVLMHTLMLAAGIGAMPKLDESQTVGDLFKTPETNSSLDPNEAGEDPILKIPSFKVSGPASSSSLSPGLVAQAGYSSGNSLLPSSSSSIQKMMASNIQRQINEQSGQDVLRNGSASDCSSNNGGGGGSSSSSMGYKKPSISVAKIIGGTDTSHFGASPNLLSQQHHHPGHSGHLSHHQQQQLAAQDAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKIHLDKLKPGNHSGSKLSNALKNNSQAAAAAAAAAAAAAAATPNGLKLPLFEGAPHQLPFQSNMFWPQPNATNAYGLDFNRMAEAMRQQPPQGAGGNHHGPMKSALEMAENMYDGIIRKTLQSSESSSSGNGSAAGNGSSNGNGHGHALLDQLLVKKTPLPFTNQRSNDYAATCSSASAESVKRSGSPMGNYADIKRERLSADSGGSSDEEHSSRHTPANNNNSDLAHNKNKSSASSSSFGASGNGQVNVTANGNGRSSRMTSRDSETDASSLKSAESGHLHQLHHHQNHKTMDLNGSRIKCESEAEMGPSGSPILHEKLAQIKAEQVEQQQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00617557;
- 90% Identity
- iTF_00540994;
- 80% Identity
- -