Basic Information

Gene Symbol
osa_1
Assembly
GCA_008042755.1
Location
VNKA01004063.1:9728-20402[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.7e-26 2.4e-22 79.2 0.0 3 89 569 652 567 652 0.94

Sequence Information

Coding Sequence
ATGCCACCTGCCGGCCGGCATTTGTCCGTTTTAGCCGCTTTTGCACTCAACACTAACCTCTTTTCaattccattgccattccagGAGCTAATTGGTCAGAATAGCAACGACAGCTCCAGCGGTGGGGCGCACAGTGGTATGGGCTCTGGTCCGCCCGGCACACCCAATCCCCAACAGGTGATGCGACCCACACCCTCGCCCACCGGCTCCTCCGGTTCCCGTTCTATGTCCCCAGCAGTGGCCCAAAACCATCCAATCTCGCGTCCGGCAAGCAACCAATCGAGCAGCGGCGTGCCCATGCAGCAGCCACCAGTGGGAGCGGTAGGTGGACCACCACCGATGCCCCCGCATCCCGGCGTTCCAGGCGGTccgccccagcagcagcagcaatctcagcagcaacaacaggccTCGAATTCGGCCTCTTCAGCCAGCAATTCGCCGCAACAGACGCCGCCACCAGGACCGCTACCGCCCAATCAACAGGGCATCAACAATATGGCAACGCCACCGCCACAAGGAGCGGCTGGAGGAGGCTACCCAATGCCGCCGCACATGCACGGCGGCTATAAGATGGGCGGTCCGGGCCAGAGTCCCGGTGGTCAGAGCTATCCgccgcagcagccacagcaatATCCACCAGGTAACTACCCGCCACGCCCGCAATATCCGCCTGGCGCCTACGCAACGggcccaccaccaccaccaacaagCCAACAAGCAGGGGCCGGTGGAGCCAACAGCATGCCCTCTGGTGCCCAGGCTGGCGGCTATCACGGTCGCGCCATGCCCAACCACAGTGGTCAATATCCGCCGTATCAGTGGGTGCCGCCCTCGCCGCAGCAAGCCGTGCCCGGCGGGGGTGCTCCCGGTGGTGGCGCAATGGTCGGAAATCATGTCCAGGGCAAGGGCACTCCGCCACCGCCATCAGTTGTGGGTGGTCAGCCACCCCCGCCTCAGGGAAGCGGATCCCCGCGCCCCCTTACCTATCTGAAGCAGCATTTACAGCACAAGGGCGGCTACGGAGGTAGTCCGACGCCGCCACAAGGCCCACAAGGCTACGGCAACGGGCCGACAGGCATGCATCCGGGCATGCCAATGGGTCCACCCCATCACATGGGACCGCCGCACGGACCCACGAGCATGGGTCCGCCCACCACCACGCCACCTCAGGCGCAGATTCTCCAGGGCGGCCAGCCTCCAGGACAGGGACAAGGTGCTGGCCCAGAAAGTGGTGGCGGTCCGGAGCATATTTCGCAGGATAACGGCATAAGTTCGTCGGGGCCGACGGGTGGTGCGGCGGGAATGCATGCGGTTACCGCAGTGGTCACCACTGGACCGGATGGCACACCCATGGACGAAGTCAGTCAGCAGAGCACACTATCGAATGCTTCGGCGGCATCCGGCGAAGATCCTCAATGCACTACACCAAAGTCGCGCAAAAATGATCCCTATGGCCAAAGTCACCTAGCTCCGCCTAGCACATCGCCGCATCCGGTTGTGATGCAtccaggcggcggcggtggccctGGCGAGGAGTACGACATGAGTTCACCACCCAATTGGCCGCGTCCGACTGGTAGCCCTCAGGTGTTCAACCATGTTCCGCAGGTGCCGCAAGAGCCCTTCCGCAGCACCATCACCACAACCAAGAAATCGGATTCGCTGTGCAAGCTATACGAGATGGATGACAATCCGGATAGGCGCGGCTGGCTGGACAAGCTGCGGTCGTTCATGGAGGAGCGGCGAACACCGATTACCGCCTGCCCAACCATCTCAAAACAGCCACTCGATTTATATaggttatatatttatgtaaaagaACGTGGCGGATTCGTCGAGGTGACCAAGAGCAAGACCTGGAAGGATATCGCTGGACTCTTGGGCATCGGTGCGAGCAGTAGTGCCGCTTATACGCTTCGAAAGCACTACACCAAAAACCTACTGACCTTCGAGTGTCACTTTGATCGCGGCGATATTGATCCGTTGCCGATCATCCAGCAGGTGGAAGCTGGCAGCAAAAAGAAGACGGCCAAGGCAGCATCAGTTCCATCGCCAGGATCGTCGAATTCACAGGATTCGTTCCCAGCACCGCCAGGCTCCGCACCGAACCCAGCGATCGATGGTTATCCCGGCTATCCAGGCGGAAGTCCGTATCCGGGAGCTAGCGGGCCGCAGCCGGATTATGCCACCTCGGGGCAAATGCAGCGTCCACCCTCCCAGAATAACCCGCAGCAGACTCCTCATCCCGGCGCCGCAGCCGCTGTTGCCGCCGGCGATAATATAAGCGTGAGCAATCCCTTTGAGGATACCGTTGCTGGCGGTGGTCAACCGGGTTCGGTTACTGGCCCCGGTTCTGGTCCTGGTCCCGgtgctggaactgctgctgctgtggtcgGTGGCCCACAACTAataccgccgccaccaccccATTCACCGCACACGgcaagccaacaacaacaacagcagcatcccCATCCGCAGCACCtggcgccgccgccaccacagcagcaacagcagccacaggGGCAGCAGCCACCGCCAGCACCACAGCAACATGGGCCTGGTCCGGTGCCGCCGCCCtcgccacagcagcagcagcagcatgtgcGACCGACCGCCGGCGGAGCACCTTATCCGCCGGGTGGCTCTGGTTACCCAACGCCTGTTGTGTCTAGAACGCCAGGCTCACCCTATCCATCACAGCCGGGAGCTTACGGGCAGTATGGCTCGAGTGATCAGTACAATGCCACTGGGCCGCCTGGTCAGCCTTTTGGACAGGGTCCAGGACAGTATCCGCCGCCGCAGAACCGCAGCATGTACCCTCCCTATGGGCCGGAGGGGGAAGCTCCTCCAACTGGTGCCAATCAGTACGGTCCGTATGGTAATCGACCTTATAGCCAGCCACCGCCGGGAGCACCTCAGCCGCCGGCGCAGGCAGTGGCGGGCGGTCCGCCAACGAGCGGAGCTCCAGGAGCACCACCCAGCAGTGCGTATCCAACGGGCAGGCCGGGGCAGCAGGACTATTACCAACCGCCACCAGATCAAAGTCCACAGCCAAGACGGCACCCCGACTTCATCAAAGACTCGCCGCAGCCCTATCCAGGCTACAATGCTAGGCCTCAGATTTATGGTGCTTGGCAAGGCGGTAACCAGCAGTATCGGCCTCAATACCCGACCTCACCTGCACCTCCACAGGCCTGGGGAAGTGCTCCCCCACGCGGAGCAGCTCCGCCGCCGGGTGCACCTCACGGCCCGCCTCTGCAGCCACCTGCCGGTCCACAGGCGCCACCACAATGGGCACAGATGAATGCTGGTCAGGCACCGCAACCTGGCATTGCTCCACCAGGCTCTCCACTGCGCCCTCCCTCCGGACCCGGTCAGCCACAACAACGGATGCCCGGAATGCcgccacaacagcagcaaccgcaacaacaacagcagcagccgccagtcGGTGGTGCTcagcagccaccgccgccgcagcaggCGACCCACGGAGGCGTTCCATCGCCAGGCATGCCCCAAGTGGGTCCCGGTGGAATGGTAAAGCAACCATACGCcatgccaccgccgccatccCAGGTGGGACCACCCGGCAGCGGAGCCGCCCAATTGGTGAAGAAGGAACTGATCTTTCCGCACGACAGCGTCGAGTCCACCACGCCAGTGCTGTACCGAAGGAAGCGACTAACGAAGGCTGACGTGTGCCCGGTGGATCCGTGGCGAATATTCATGGCCATGCGATCCGGCCTACTTACCGAGTGCACCTGGGCCCTGGATGTGCTCAATGTCCTCCTGTTCGACGACTCGACGGTGCAATTCTTTGGCATCTCGAACCTTCCCGGTCTGCTGACTCTGCTGCTGGAGCACTTCCAGAAGAATCTCGCCGAGATGTTCGATGAACGGGACTGCGATGAGCTGCCATCTTCCTCCCAGCTCGCTGAGGAAGCGGCGGCAGACGACGACGCGGATAGCGGCACCGTGTTGTGCGATAAGCAGCGACGAACCAGCGGACAGCGACAGTCGCGATGTGTgcgcagcatcagcagctaCAATCGACGTCGGCACTACGAGAACATGGATCGTAGTGGAAAGGGCAGCGAATCGGAGGAGGATGCCGACGAAGGCATCGATCTGGGCCAAGTGCGTGTGCAGCCCAACCCGGAGGAGCGCTCGCTGCTGCTCTCTTTCACGCCCAACTACACGATGGTCACGCGAAAGGGTGTGCCTGTGCGGATTCAAACAGCCGATCACGACATATTCGTGGACGAGCGCCAGAAGGCGTGGGATATTGACACCAATCGCCTGTATGAACAGCTGGAGCCGGTGGGCAGTGATGCCTGGACCTACGGATTCACCGAACCGGATCCCCTCGACGGCATTATAGATGTCTTCAAGTCGGAGATTGTAAACATTCCATTTGCACGCTACATCCGCTCTGAAAAGAAATCATCGGCGAAGTCATCGGCCAAGAAAACGGAGATCAAGCAGGAGCCAATTAGCACGGAGGAACAGCGGCAGACGCAGTCGACTTTTAACAAGAAGAGGCGACTGGTGAGTGGCGACaacagcaatagcagcagctGCGGAGCTACCGCTGAGAGCAAGAAATCCAAGCTGTCGGCCGAGGAAGAGTTCGCACAGCCTCCCAGCGCTGAGGTTAAGAAGGAGCCTGGCAACGATAGCGATTGTCGGGCCATCGACATGGAAATCGAAACAccgcagcaccagcaacagcaaacgCAACGTTTGACCAACGGCGTTGCATCCTCGTCCacctcttcctcctccacctcaACGCCGGGCGTCGGTTTCGATCCCCGGAAGACTGTTAAGGATGCCGCACAAGTGCTACAGCGGAGACGTGATTCCAGCTACGAGGACGAGTGCTATACACGCGACGAAGCGTCGCTGCATCTGGTCAATGAGAGCCAGGACTCGCTGGCGCGCCGTTGCATTGCCCTATCCAACATCTTCCGCAACCTGACCTTCGTGCCCGGCAACGAGACGGTGCTGGCCAAGTCTACACGATTCTTGGCAGTGCTGGGTCGACTCCTACTCCTCAACCACGACCACTTGCGGCGCACGCCGAAGACACGGAACTACGATCGGGAAGAGGACACGGACTTTAGCGACTCATGCAGCTCGTTGCAAGGAGAACGCGAGTGGTGGTGGGACTACCTGATCACCATCCGGGAAAATATGCTGGTGGCCATGGCAAACATAGCCGGACATTTGGAGCTGTCACGCTACGATGAGCTTATTGCCCGCCCCCTGATCGATGGCCTGCTCCACTGGGCCGTGTGTCCCAGTGCCCACGGCCAGGATCCGTTCCCGTCATGCGGCCCCAACACGGCGCTCTCGCCGCAGCGCCTCGCTCTTGAGGCACTTTGCAAGCTGTGCGTGACGGATGCCAATGTGGACCTGGTTATTGCCACACCACCGTTCTCCCGCCTGGAGAAGCTGTGTGCTGTGCTGACGCGGCATTTATGCCGCAACGAAGATCAGGTGCTGCGCGAGTTTTCCGTCAATCTGCTTCATTACCTGGCCGCCGCCGATAGTGCCATGGCCCGCACTGTGGCGCTCCAGTCACCGTGCATCTCCTATCTGGTGGCCTTCATCGAGCAGGCCGAGCAGACGGCCTTGGGCGTGGCCAATCAGCATGGCATCAATTATCTGCGCGAGAATCCAGACTCGATGGGCACTAGTCTGGACATGCTGCGGCGGGCGGCCGGCACACTGCTTCATTTGGCAAAGCATCCGGACAACCGGTCGCTGTTTATGCAGCAGGAACAGAGGCTACTCGGCCTGGTCATGTCACACATCCTCGACCAGCAAGTGGCGCTAATCATCTCCCGAGTTCTGTACCAAGTGTCTCGCGGTACTGGCCCCATTCATTCGGTGGAGTTCCGGTTGCTtcagcagcgccagcaacaGCATAACCTGCAACAGCGTCTGCAGCCTGGCGGAGCCGAGAAGTTAGCCGCCACCAACGCCAcggtgGCTCAACCAGCGGCACCGCCACCAACTAATGCAGGAACAACGACCGCCGTTGCGTAG
Protein Sequence
MPPAGRHLSVLAAFALNTNLFSIPLPFQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGVPMQQPPVGAVGGPPPMPPHPGVPGGPPQQQQQSQQQQQASNSASSASNSPQQTPPPGPLPPNQQGINNMATPPPQGAAGGGYPMPPHMHGGYKMGGPGQSPGGQSYPPQQPQQYPPGNYPPRPQYPPGAYATGPPPPPTSQQAGAGGANSMPSGAQAGGYHGRAMPNHSGQYPPYQWVPPSPQQAVPGGGAPGGGAMVGNHVQGKGTPPPPSVVGGQPPPPQGSGSPRPLTYLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMHPGMPMGPPHHMGPPHGPTSMGPPTTTPPQAQILQGGQPPGQGQGAGPESGGGPEHISQDNGISSSGPTGGAAGMHAVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYGQSHLAPPSTSPHPVVMHPGGGGGPGEEYDMSSPPNWPRPTGSPQVFNHVPQVPQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRSFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPSPGSSNSQDSFPAPPGSAPNPAIDGYPGYPGGSPYPGASGPQPDYATSGQMQRPPSQNNPQQTPHPGAAAAVAAGDNISVSNPFEDTVAGGGQPGSVTGPGSGPGPGAGTAAAVVGGPQLIPPPPPHSPHTASQQQQQQHPHPQHLAPPPPQQQQQPQGQQPPPAPQQHGPGPVPPPSPQQQQQHVRPTAGGAPYPPGGSGYPTPVVSRTPGSPYPSQPGAYGQYGSSDQYNATGPPGQPFGQGPGQYPPPQNRSMYPPYGPEGEAPPTGANQYGPYGNRPYSQPPPGAPQPPAQAVAGGPPTSGAPGAPPSSAYPTGRPGQQDYYQPPPDQSPQPRRHPDFIKDSPQPYPGYNARPQIYGAWQGGNQQYRPQYPTSPAPPQAWGSAPPRGAAPPPGAPHGPPLQPPAGPQAPPQWAQMNAGQAPQPGIAPPGSPLRPPSGPGQPQQRMPGMPPQQQQPQQQQQQPPVGGAQQPPPPQQATHGGVPSPGMPQVGPGGMVKQPYAMPPPPSQVGPPGSGAAQLVKKELIFPHDSVESTTPVLYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISNLPGLLTLLLEHFQKNLAEMFDERDCDELPSSSQLAEEAAADDDADSGTVLCDKQRRTSGQRQSRCVRSISSYNRRRHYENMDRSGKGSESEEDADEGIDLGQVRVQPNPEERSLLLSFTPNYTMVTRKGVPVRIQTADHDIFVDERQKAWDIDTNRLYEQLEPVGSDAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYIRSEKKSSAKSSAKKTEIKQEPISTEEQRQTQSTFNKKRRLVSGDNSNSSSCGATAESKKSKLSAEEEFAQPPSAEVKKEPGNDSDCRAIDMEIETPQHQQQQTQRLTNGVASSSTSSSSTSTPGVGFDPRKTVKDAAQVLQRRRDSSYEDECYTRDEASLHLVNESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLRRTPKTRNYDREEDTDFSDSCSSLQGEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNTALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPIHSVEFRLLQQRQQQHNLQQRLQPGGAEKLAATNATVAQPAAPPPTNAGTTTAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-