Basic Information

Insect: Drosophila bipectinata
Gene Symbol: Ouib
Assembly: GCA_018153845.1
Location: JAECYF010000041.1:9893389-9896431[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.5e-05 0.0034 17.6 0.8 1 23 61 83 61 83 0.98

2 9 0.00014 0.01 16.1 0.1 1 23 89 111 89 111 0.97

3 9 0.6 45 4.6 0.9 3 23 119 139 117 139 0.96

4 9 1.1e-05 0.00082 19.6 0.1 1 23 145 167 145 167 0.95

5 9 0.00032 0.024 14.9 1.7 1 23 402 424 402 424 0.97

6 9 0.0086 0.65 10.4 0.0 1 23 430 452 430 452 0.97

7 9 0.00016 0.012 15.9 1.3 1 23 458 480 458 480 0.98

8 9 3.4e-06 0.00025 21.2 2.1 1 23 486 508 486 508 0.97

9 9 1.1e-05 0.0008 19.6 3.0 1 23 514 538 514 538 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.5e-05	0.0034	17.6	0.8	1	23	61	83	61	83	0.98
2	9	0.00014	0.01	16.1	0.1	1	23	89	111	89	111	0.97
3	9	0.6	45	4.6	0.9	3	23	119	139	117	139	0.96
4	9	1.1e-05	0.00082	19.6	0.1	1	23	145	167	145	167	0.95
5	9	0.00032	0.024	14.9	1.7	1	23	402	424	402	424	0.97
6	9	0.0086	0.65	10.4	0.0	1	23	430	452	430	452	0.97
7	9	0.00016	0.012	15.9	1.3	1	23	458	480	458	480	0.98
8	9	3.4e-06	0.00025	21.2	2.1	1	23	486	508	486	508	0.97
9	9	1.1e-05	0.0008	19.6	3.0	1	23	514	538	514	538	0.92

Sequence Information

Coding Sequence: ATGCTTGTGAATAGATGTAGAACTTGCGGGATAAGTCCTATATGTGCCAGGAGTTTAAATCTTTTTGCCTTGGAAAACAAGAAGCTCCTGTTAAACTTAAACCTGGTGACAGGATTGCAGAAGAAAATACCCCGAAAGGTTCAAAAGCCGAACCTTAAGAGCAAGTCGATCAACCAGATCTACATCTGCGAGTTGTGCGGCACTCATGCCACATCGAAAAGCAATTTGGATCGACACATTCTGAAGCACACAGGGGAGCGGCCATTTGCATGCGAGGAATGCGGTGCTAGGTTTCGAAGCGCTGCAGAGCAACGTGATCATCGTCGGGTTCACACAAAGGATCGTCCATTTGGCTGCCGCTTCTGCGACCGGAAATATGTAAGCTATATGGGGAGACTAAAGCACGAGAGGATTCATACCAATGATCGACCATTTGTCTGCATTGAGTGCGGGAAGACCTTCTCTGACGCTTATGTACTCAAGAACCACATGCTCATCCACTCGGTGTTGATTACGTTTCGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATCTCTGTCGCTTGTGTGCCACCAACACGAGCACGACCAATGCCATAAAGTTGTTCTTGAATGACACTAGGATAATACTGCATGATATTAAGTTACTCACCGGTGTCCTGCTGCAATGCGAGCCCGACTTGCCCGACTGGATGTGCGAGACATGTCAGCAGGATCTGAAGAGCGCCATCGACTTTCGGGAGCGATGCCTGAAGAGTCAGAAAGTTTTCGAGGAATCAGAAGCCGAAATTTCCTCTGGCTCCTCGAAAGCCACCTCCCACTCCTTATCCACCCGCCTGGGATGTGTGCGCCGAAGTACTCGTTGTCGTTCTAGAAATAACAAAAGTGCCGAGCCCGTGCTGCCACCCACTCCCATGGAAGTAATGATTAAGCTGGAGAGCCTGAGCAACAGCGATGGAGACGACGACGGCGTCGATCATTTGGACTCGAGCCACGAGGCCGACCTGGAGCGGGCCATCAAGGAGATGTCTATATCAGAGGAGGAGGAAGACAAGCCACTCATAACGAACAGGGGCAAGCGTCGAGGTCGTCCCAAGAGTGCAGTGAAGCTCAAAAAGCGGCCCAAAGCTTCGCTCACGGTGTTCTTTTGTGACCAGTGCGGTAAAAACATTACAGGCAAGTCCTCCTTCGATCGCCATCTGCGTAAACACAGCGGCATACGGCCCTTCCAGTGCCAAATTTGCCCAGCCCGCTTCCTCTCCGCCGGAGAGCTCAAGGGCCACCAGGTGATGCACACTGGAGACAGGAACTTTCCGTGCCGCTACTGCGACCGATCCTATGTCAACTACAGTGGTCGCATGCGGCACGAACGCACCCACACCAACGATCGCCCCTTCGCCTGCCACCAGTGTGGAAAAACCTTCACCAATTCTTACATTCTCAAGAACCATATGCTCATTCACACGGGCGAGCGTTTATTCAGATGCGAGCTGTGTCAGAGGTCGTTCGCACGCCCCACGCACCTCAACACGCACTACCGCTCGAACACACACAAGCATAACGTGGAGAAGGCGAAGGTTGGCTCGGAATCCAGTCAATCGCAATCCCAACCAAACGAGCACAGCAAGCTCTCATCGATAGCAGAGACGCAACCGGAGGAAATAACTTATATGATAGAAGTGCCTTTGCCGTTGGATCAGAAGCAGGAGGAAGATACTTCTCTGGAACTGGCAACTCTGGGTACATCAACTTTAGTCTACAGTACAAATTAA
Protein Sequence: MLVNRCRTCGISPICARSLNLFALENKKLLLNLNLVTGLQKKIPRKVQKPNLKSKSINQIYICELCGTHATSKSNLDRHILKHTGERPFACEECGARFRSAAEQRDHRRVHTKDRPFGCRFCDRKYVSYMGRLKHERIHTNDRPFVCIECGKTFSDAYVLKNHMLIHSVLITFRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLCRLCATNTSTTNAIKLFLNDTRIILHDIKLLTGVLLQCEPDLPDWMCETCQQDLKSAIDFRERCLKSQKVFEESEAEISSGSSKATSHSLSTRLGCVRRSTRCRSRNNKSAEPVLPPTPMEVMIKLESLSNSDGDDDGVDHLDSSHEADLERAIKEMSISEEEEDKPLITNRGKRRGRPKSAVKLKKRPKASLTVFFCDQCGKNITGKSSFDRHLRKHSGIRPFQCQICPARFLSAGELKGHQVMHTGDRNFPCRYCDRSYVNYSGRMRHERTHTNDRPFACHQCGKTFTNSYILKNHMLIHTGERLFRCELCQRSFARPTHLNTHYRSNTHKHNVEKAKVGSESSQSQSQPNEHSKLSSIAETQPEEITYMIEVPLPLDQKQEEDTSLELATLGTSTLVYSTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00566267;
90% Identity: iTF_00566267;
80% Identity: -