Dbif013210.1
Basic Information
- Insect
- Drosophila bifasciata
- Gene Symbol
- hang
- Assembly
- GCA_009664405.1
- Location
- CM019041.1:12302969-12307729[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00041 0.027 14.7 0.2 2 23 4 26 3 26 0.95 2 14 0.0012 0.078 13.2 0.1 1 23 34 57 34 57 0.96 3 14 0.00015 0.01 16.0 0.2 2 23 143 164 142 164 0.97 4 14 0.00017 0.011 15.9 2.9 2 23 275 297 274 297 0.97 5 14 0.013 0.88 9.9 0.2 2 23 306 328 305 328 0.95 6 14 0.0012 0.078 13.2 0.2 1 23 341 364 341 364 0.97 7 14 7.3e-05 0.0049 17.0 1.1 1 23 449 471 449 471 0.99 8 14 0.0011 0.075 13.3 0.9 1 23 479 502 479 502 0.96 9 14 0.84 56 4.2 0.4 2 19 510 527 509 528 0.92 10 14 7.2e-06 0.00048 20.2 1.5 3 23 621 641 620 641 0.98 11 14 0.0004 0.027 14.7 0.2 1 23 676 698 676 698 0.97 12 14 3.6e-05 0.0024 18.0 0.6 2 23 788 810 787 810 0.93 13 14 0.0026 0.17 12.1 0.5 3 23 866 886 866 886 0.98 14 14 5.9e-05 0.004 17.3 2.1 1 23 1203 1225 1203 1225 0.98
Sequence Information
- Coding Sequence
- ATGCCACAGGTATGCCCCATCTGTGGCCAACAgtacaacaactacaacaacgtGCTGCGTCACATGGAATCGAAGCATCCCAACAAGCTGCCCGAGACATACAAATGCGTGCGCTGCGGCCTGGGCTATCCAAGAATCTCGTATCTGCGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGTCATTCCGGTGGCTTTGAGTACATTGTGAATGCGGATGCCGTCAAGCTGGCCGATGGCAGTACCCCGAATGTGTCCACGGGTCGTTACGACTATGTGATGAAGGATCTGATGTCAATAACAAATGGTGGGACACTCGatgacgatgaggaggagacCGGCAGCATGGCCAAGAAGATACGCCTGGACgatagcagcaacaacagcagtctGGTGGGTGGCGTGGTCAGCCAGCAAAAGGAATGCCCCATCTGCAATGCACTGTTCAGCAACAATATTGGCCTGTCCAATCACATGCGCTCGCATTACACGGCCTCGAATTCCGTGAATGCCGCTCTGGTGGCGGCCAATCGCATGACACCCAAATCCCTGACCATAACCGCCGCCCCAGCCACCGAGACGGTCACATCATCGGCAGCCTCAATCGATGTGGAAGATGATGAGGCCATTCTGGCGATCGAAACAGGAAAGATTATGGCCAGCGTCAGTGGGGTTAGGGGTGCTGCTTCTGTGTCCGCCTCTGGCTCTgcatctgctgttgctgtgcccCCTGCCATGGTTAATCAGACGCCCCAAGAGCAGGCCGTATTTCGCCGGAGCCTTGACCAGGCGGCAGATCGTCGCTTTCGCCGGATGCGCTGCCGCATCTGTCAGCGGCGTTTCAGCTCAAAGAAATCATACCGCTATCACATGCTCACCGACCACCAGGTGCAGAATGTGCAGTTCATCAAATGCAAGCTCTGCAATGCGGAGTTTGCCTACGAGAAGGGTCTAAAGGTGCATCTGTTCAAGGTGCACGGACGTGCGATCAAGGATGAGATGATTGTGAAGCAGTTTGAGTGCGATGTCTGTTCGATTGTCTACAGCtcggagctggagctgaagcagCACAAGAGAAGTGTCCATAAGCTAACATCCGTGTCGGTGTCTGCATCCGCCtcggcttcggcttcggcatcggcttctgcctctgcatcCACATCCTCGAAAATCGATGATGATTCACTGATGATGGAGGAGATTGGTGGCAATAGAAGCCgtcaccatcaccatcatcagcagcacaGCAAGACATCTGGCGACTTGGCCTTGGCCGACCAGTCCATCATTTccgctgtggctgccacagccactgccacaacgACGCCTTTGTACTGGTACCAATGCAAATACTGTCCCTCCAActttaacacaaacaaaaagctGGCCATACACATCAATTCGCACGATGAGTTCGACTCGAATGATTATTCGTGCAAGGACTGCGGCAATGTCTATAGCGGCCGCAAGAGTCTATGGGTTCATCGCTACAAAAAGCATCCCCAGGTGCCCGACCCAATCGAGTGCATGCTGTGCCGCAAGGTATTCTTTGACCATCAGATGCTGGACAATCATACGCCAACCTGCAACCGCAAACCGATTACCGCCACGGGCGCGCATCAGCAGGAGCTGCTGACGCAGACAAATCAGTCACAGGGTCGGGCCGTATTCAGGCACAAGACTGGCGACGATGATGACGAGGAAGACatgcaccagcagcacccacacccacaccagcagcagcgtaaCCATCAGGAGGATGCTGGTGATGGGGGAGCAGCCGTGTCAACAgttacagcaacagcagccacaacgAGTGGCAGTACGAAAAAGATACGCATACCGGATGTGGCCTGTACAATTTGTGGTGCCCGTTTCACCGATCAGGAGCACTTTACCAAGCACATACAGAAGCATGAGCAGGATCTATATGTGGACAATCCGTTGGCAGCGATGTTCGATGATGGGCCAGCAGATGCGGCCCAATTCAAGGTGGAGGGCCAGAACGAGAATGGGGAATATGCGTGCGATATGTGTACAAAGACATTCCCCCAGGTGATTGCACTCAAAGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCACATCGACAGCGAAACGACGAAtatcatcaacaacaacaacaacaacaattcgGTGAACAACTCCACATCGATGCTACGGGAGCTGCATGCAGTGGGTCTGACGCccaaccaacaacagcagcagcagcagagccaacAACAGAACTCCACGTCCACgccgaacaacaacagcagcagcaacaacaacaacaacagcagcagcagcagcaggagcaaatCAATGAAACGTAAACGTGAATTGAAATGCGAATACTGCCCCTCGACCttcatcagcaacaacaacctgCGACGCCACATGTATGAGCTGCATAAGCATGAAGTGAGTAGCCTGCCAGCACCGCCAGTGATTGTGGTAGATGAGCCACTGACCTGTCGACGCTGTGGCAATGTGAAATTCGAGACAAAAGAACTGTGGATCGAGCACAAGCTGGCCGATGCGAAGGTGGTGCGACCGTTTTGCCCCTTCCAATGGGGCTGTGACATGTGCGGCGAGTACTTGTCGCGCAAGGAGAAGCTCATGAATCACATCAACAATCATTTGAAGGAGGACGTCATTGTACCAGTGGCCACACAAGCGGCCATTGACAGAGAACATGCATCgacagcatcatcatcatcatcagcagcatccgGCGCAACAACATCCAAAGCCTCATTATCCGTATTGGTTGAGCCTTCGAGCGCAGCATTGAAAAAGAAAGCGGATGAAAATGGTGGACTGGATGCAGCGGATACGGTAGCGGCGGTGAAGCCAGGGGAAGATGATAGCGAAATGGAGGATGACGACAGTTCAGACGCTGATGAAGAAAGCTCTGGCACAGGGGatgaggacgacgacgacgatgatgaagaCGATGAGCTGCAGGATGAGGACGATGATGAAGATGAGGGCGAAGATGAAGAGGGAGTGCCCCCACCAACATCGGCCACACAATTATTGCAACTCAAACAGCACAAGGCCAATAATATTGACAACGATGATGATCTTGTCGAGGAAGTAAACAGCTCTGATGATGAGGAGCCAGAGGATGGAGGCGAAGTCGGTAGCGATAGTCAATCTCAAAGCGATgaggacgatgacgatgaagaagacgacgacgacgacgatgatgaagacgacgaggaggaggatgatgaAGAGCCGCAGGGCTCGTCACAGCCCATGATGAATGGCAAGTCTAAAAAACATCACACATCGTCCCAACAGCAAAGGGAGCAGATATTGCCCAGctccgacgacgacgatgacaacGAAGAGGGGGAGGGCAATGTAGATGGCCATGCTTTGGCCATTGAAGACATTATTGAAGAAGAATTTGATGAAGACGATGATGTGGAGGAGGTGTATGATGAGCAGAATGTCGATGGGGGGGCCACATCGTCGGCCTCTTCATCAGAGAGCGAATCAACATCCACGACCACATCCAATTCGCATTCAACTGGTGAGCGGCGCAAGAAGGCTGGCGACCAGTCGTCAAATCCCAGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTTCTCCAGTCTCACATCAAAAGCCATTTTCTCAATGGTCCAAAAATCTCTGCCTCTCAAGCAACAAgcaatgcaacagcaacaccaacggCAACGGTAACGACGACGGctacggcaacggcaacggtgACGACTGTTCCCAGCAGTCTTAACACCAATGCCTCGACCAAATCCTCGAAGCtctctccagcagcagcagcagcagctgcagtcaCCACCAATACCAATGCCAACAACAACCGGCAAAGAAGTGCCGCCACAGAAATGGGGGCcagcggtggcagcagcaagagcaatTGA
- Protein Sequence
- MPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVSTGRYDYVMKDLMSITNGGTLDDDEEETGSMAKKIRLDDSSNNSSLVGGVVSQQKECPICNALFSNNIGLSNHMRSHYTASNSVNAALVAANRMTPKSLTITAAPATETVTSSAASIDVEDDEAILAIETGKIMASVSGVRGAASVSASGSASAVAVPPAMVNQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELKQHKRSVHKLTSVSVSASASASASASASASASTSSKIDDDSLMMEEIGGNRSRHHHHHQQHSKTSGDLALADQSIISAVAATATATTTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPIECMLCRKVFFDHQMLDNHTPTCNRKPITATGAHQQELLTQTNQSQGRAVFRHKTGDDDDEEDMHQQHPHPHQQQRNHQEDAGDGGAAVSTVTATAATTSGSTKKIRIPDVACTICGARFTDQEHFTKHIQKHEQDLYVDNPLAAMFDDGPADAAQFKVEGQNENGEYACDMCTKTFPQVIALKVHRKWHFRGDSKQNHIDSETTNIINNNNNNNSVNNSTSMLRELHAVGLTPNQQQQQQQSQQQNSTSTPNNNSSSNNNNNSSSSSRSKSMKRKRELKCEYCPSTFISNNNLRRHMYELHKHEVSSLPAPPVIVVDEPLTCRRCGNVKFETKELWIEHKLADAKVVRPFCPFQWGCDMCGEYLSRKEKLMNHINNHLKEDVIVPVATQAAIDREHASTASSSSSAASGATTSKASLSVLVEPSSAALKKKADENGGLDAADTVAAVKPGEDDSEMEDDDSSDADEESSGTGDEDDDDDDEDDELQDEDDDEDEGEDEEGVPPPTSATQLLQLKQHKANNIDNDDDLVEEVNSSDDEEPEDGGEVGSDSQSQSDEDDDDEEDDDDDDDEDDEEEDDEEPQGSSQPMMNGKSKKHHTSSQQQREQILPSSDDDDDNEEGEGNVDGHALAIEDIIEEEFDEDDDVEEVYDEQNVDGGATSSASSSESESTSTTTSNSHSTGERRKKAGDQSSNPSFTCDLCQLCFDSQELLQSHIKSHFLNGPKISASQATSNATATPTATVTTTATATATVTTVPSSLNTNASTKSSKLSPAAAAAAAVTTNTNANNNRQRSAATEMGASGGSSKSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -