Dbif011797.1
Basic Information
- Insect
- Drosophila bifasciata
- Gene Symbol
- bab1
- Assembly
- GCA_009664405.1
- Location
- CM019043.1:48005353-48007032[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.3e-18 1.2e-14 53.5 0.0 1 43 56 99 56 101 0.95 2 3 2.5 4.7e+03 -2.9 0.3 6 13 219 226 213 228 0.76 3 3 3.8 7e+03 -3.4 0.1 4 11 234 241 234 241 0.84
Sequence Information
- Coding Sequence
- ATGATGGAGAATTCGCATGCCTGGATGGGGGCCACCGCTGGCTCCACGCTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAATGCTGGAACACCAATCAGAATCTGATGCATCACATGCGCTTCCGGGAGCGAGGACCCCTCAAGTCGTGGCGACCCGAAACGATGGCCGAGGCCATTTTCAGTGTCCTCAAGGAGGGGCTCTCCCTGTCGCAGGCGGCCCGCAAGTACGACATTCCCTATCCGACATTCGTGCTATATGCGAATCGGGTGCACAATATGCTGGGACCCTCGATCGATGGCGGACCCGATTTGCGGCCCAAGGGCCGGGGCAGGCCGCAGCGCATCCTGTTGGGCATTTGGCCGGATGAGCACATCAAGGGGGTGATCAAGACGGTGGTTTTTCGCGATGCCAAGGACATGAAAGACGACAGCCTAGGCGGCCACATGCCGCCCTACGGTCGTCACTCGGAGATGACGCTCAGCTATCCAGGCGCTAGTGGCGGCATTCCAGGGCCAGGAGCCGCTAGCCTCAGCGCTCTGGCCTGTCCCAATGGCATGGGCAGCGGTGGAGGCGGAGTACCGGTAGGACCCGGCGGAGTGGGCGTCCCAGGCGTCGAGCAGCACATGTCGCAGGAAACAGCAGCCGCCGTTGCCGCCGTGGCGCATAACATACGACAGCAGATGCAGATGGCCGCCGCCGTGCAGCATCAGCACGGGGAGGCGGGGCCGCCGGTGGTGCCACCGCCCGGGCTGTTTAACCTGCCGCCACATCTGGCCAGTGGGCCACCcggcagcaggggcagcattTCCCCGGCGCTAAGCAGCGGCTCAGGGCCGCGACACGCTCCCTCGCCGTGCGGCCCCGCCGcattcgcattcgctttcgcatccgcatcccattcccattcgcaTCAGGGGGAGAAGCTGCTGCCACAGAAGAAGGCAGCgagtcctcatcgcagtgaaACGCCGCGCCTGCACTCGCCTCTGGGCGATTTGGGCCTTGAGATGTCCAGCTACAAGCGGGAGTTCTCGCCCAGCCGCCTCTTTGCCGAAGATCTGGCGGAGTTGGTGGGCGCCGCCAGCGTGTCCTCCTCATCGTCGGTGAcgcagggagcagcagcaggaggaggcagtCATGCCGCAGCCATGGGAGAGGCAACCAGCTCCAGTTCAAGTGGAGGCATCAAAGTGGAACCCATTACCACTACTAGCGAGTAG
- Protein Sequence
- MMENSHAWMGATAGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDMKDDSLGGHMPPYGRHSEMTLSYPGASGGIPGPGAASLSALACPNGMGSGGGGVPVGPGGVGVPGVEQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPVVPPPGLFNLPPHLASGPPGSRGSISPALSSGSGPRHAPSPCGPAAFAFAFASASHSHSHQGEKLLPQKKAASPHRSETPRLHSPLGDLGLEMSSYKREFSPSRLFAEDLAELVGAASVSSSSSVTQGAAAGGGSHAAAMGEATSSSSSGGIKVEPITTTSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -