Basic Information

Gene Symbol
onecut
Assembly
GCA_009664405.1
Location
CM019045.1:504601-507872[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-37 7.6e-34 115.3 0.4 2 78 739 815 738 816 0.97

Sequence Information

Coding Sequence
ATGGAATCCATTAACGATATCATTGATTCCCAGACATTTAGCCAGGAACTGGTGGACGAGGCCAATGAGTTCATTACCGTTGGACACCAGAGCCAGCACCAAGACGCCGACTCCGAGTCCGAGTCACACAGTCTACATGGTGTCAGCGGTGAGTCCCTTGCCATGACCATGCAATCAATGATGTCCTCGGCGGACGGGGCTGGCGAGGAGGATCCTAGTTCTGTTGTGATGGTCATTGATGAAATCGGGAACAGCAATGTGCAGACAGCGTATCAGATTGTGCCTCAACAGCTGCAGATTCAGGGTAGGAACTTGCCACTTCCATTATCGTTGCTCCACCACCAGCATCAGCTTCAGCACCATGGGGATCACCAGGCCCAGCATCAGCAACGTCAGGAGCGAATGATCGCCAGTAGCCCAGTGGACTTTGTTGGCTCAGAAATTAGCTTGGATGGACTGACAGTGAATACGGTGCTCTCCCAAGGGGTATCTGTCAAGCAGGAGCACAAACTTCTTATAGTTCGTCGAGATCACAATTTCAGCCAAGTTAGGAATGCGCCTCAAGCCAGTAAACGCCATAATATGGATGTAGACGTTTCGAATGTCGGTGTTGGAATAATGGATGAACTTTCCTCAGACGGCTTAGTCTGCGAGGAGGAAGAAGTCACACTGAACCAACATCACCAACATCAACAGCTGCTagaacagcagcatcagtacGGCCATTTAACGCACCATCAAACTCATGGCCAAGTACATCAAAATCTGCACCATCGATCAGCCCAGCTGGGACTAGGACACAATGGAAGCGTTCACAGTGAGGTTTTATCCGTCATTGTACAGTCGCACGAAGACGATAAGGATGTGGATGGGGATGCGGatgaagacgacgacgacgatagAGACTCCGGTGGACGTAGTCAATTACTCAGTCCTGTATTGGAGCGCAGCTCATATCAGACTTTAACATCGGTCAATGATCGCATATCACCGCCCGGTTTTAGTCCAACCTCGTACGCTACGCTGACACCCATCCAACCACTTCCGCCCATATCGACGATGTCAGAAAAGTTCGCTTACTCTGGCCACATCtccggaggaggaggaggaggtggaggaggaggcgttGTCGGAAGTGGAGCAGAAGGCACAAACAACTCATCCTGCAGCGCTGCAGAGACAGGTACTGTCAGTAGTGGTAATGTCAGCTCGTCTGGTTGTAGCAACAACGATTGCAGCTCATACTCTAGCCTCCCCATGCCCATGGGAAGTGGTCACCTTGGTCTGAGTGGATTATCTGGAGTACAGTCACCGTATTCCTCCTACGATAAGTTGCCCTCGATGATTTCTCCGCCTCCAAACAACTACTCCGGCAGTCCATCCCACGGGCTCACGGGCATGGTAGTGTCGTGCGACCTGCATACGCACAGTTCCTCAGTGTCAGTACCTTCCCCAGTAGCTGGTGGATGCGTGACTCTTTCCCCGCATTCGGATTCCTCTCAGTTGCAGATAGGAGTCAACGTCAACGGCCAAAAGAGAGATGCAGTGACTACCCACGGACATagccatggacatggacacggtCACGGACTCCAGCTGGTACCCGTAACTCTGCAGAAACAGGTGATATGCCTCTCACCGACCGGTGTTATAGGGGACAGTGTGGTTGTGAGTGATTATGAGTCATCCTATAGTGGGCATAACCATGATCATGAGCTGATTATGGCCACGTCTTCGTCGACAAGTTCCACGGCCGGTCTTCATCATAGTCCAACACTCAGTCCCCACTCAGTTTCCGCCGGCTCAGTTGTTTCCATGTCCCTAAACTCGCCCACATCGGTCGTCACCTTGCCCAACATAAATGGATCTATACAAAGTCTCACAGCAGACATGCCAGTTGTTGTCTCTCTAACTCCTACCCCTCCACCTGTGACGGATGACGGGGTTGCAGGCATGAGAATGAGCGACGACCAAAGTCAAAGACATCAACATTTCCTACAGAAAAGCCAAGATACTAGTGGCGATCAGTGCAGTCCCCATAGCAACCCCCATTCACATGCCAACACAAGCCATCAACAGACACAGTCTCATCAAAATGGTTACCAGaacgtgcagcagcagcagcagcagcaacagcaaatgtCAAAATCGCATTCCCCAAAATCCAACCCAGGGACAAGTGGAGGCGGAAGCCGAAACAGCAGTGCAAGTGATATGGAAGAGATCAACACAAAAGAGCTGGCTCAACGTATCTCGGCCGAACTGAAGAGATACAGTATTCCACAGGCAATCTTCGCACAGCGCGTCCTTTGCCGCTCCCAGGGCACACTATCTGATCTGTTGCGCAACCCAAAGCCATGGTCAAAGTTAAAGTCTGGACGAGAAACGTTCCGCAGGATGTTCAAATGGCTTCAGGAGCCAGAGTTTCAACGTATGTCCGCTTTGCGGATGGCTGCTGCCCAAATCCCACAACGTACACCGCTTTCAGTGGGCACGGCATCGGGATCGGGATCGGCAGGGGCGGTCTCTTCGACCATAACGGCTACAGACTCGTCACCGACTATAGCTATGCCAACAATGACGGCAAACGCTTTGCTCAGTGGATCTTCGTCTGCCTCTTCTTCGAGCGGTGCCGTTGCCAGTATTGCCAATTGTCGCCGCAAGGAGGAACCCCAAATCGAGCAAATGCCGCAGCCAAAGAAGCCTCGTCTGGTTTTTACAGACCTTCAGCGACGTACTCTTCAAGCAATTTTTAAAGAAACCAAGAGGCCTTCAAAGGAAATGCAAGTAACAATTGCTCGGCAGCTGGGACTGGAGCCCACCACCGTGGGTAATTTCTTTATGAACGCTCGTCGCCGATCGATGGACAAGTGGCGCGATGACGATGCAAAGAATGCAATGCATTCGATGCAGAACCGTCAGCAACAACAGGATCACAACCAAAATCCAAGCAATAATTTATCACATGCAAACTACGCAAACATCCATACGACAGCGTTGTCGCCCATTGGGACCTTTGATGACGAGGCTGATATGGAATTGGAGCTGGAAAGTCACGACTTTGACTTAGTTGACGAACATGATAACGAACATGATAACAGTGACGAGCAGAGTGACATGTTGTGA
Protein Sequence
MESINDIIDSQTFSQELVDEANEFITVGHQSQHQDADSESESHSLHGVSGESLAMTMQSMMSSADGAGEEDPSSVVMVIDEIGNSNVQTAYQIVPQQLQIQGRNLPLPLSLLHHQHQLQHHGDHQAQHQQRQERMIASSPVDFVGSEISLDGLTVNTVLSQGVSVKQEHKLLIVRRDHNFSQVRNAPQASKRHNMDVDVSNVGVGIMDELSSDGLVCEEEEVTLNQHHQHQQLLEQQHQYGHLTHHQTHGQVHQNLHHRSAQLGLGHNGSVHSEVLSVIVQSHEDDKDVDGDADEDDDDDRDSGGRSQLLSPVLERSSYQTLTSVNDRISPPGFSPTSYATLTPIQPLPPISTMSEKFAYSGHISGGGGGGGGGGVVGSGAEGTNNSSCSAAETGTVSSGNVSSSGCSNNDCSSYSSLPMPMGSGHLGLSGLSGVQSPYSSYDKLPSMISPPPNNYSGSPSHGLTGMVVSCDLHTHSSSVSVPSPVAGGCVTLSPHSDSSQLQIGVNVNGQKRDAVTTHGHSHGHGHGHGLQLVPVTLQKQVICLSPTGVIGDSVVVSDYESSYSGHNHDHELIMATSSSTSSTAGLHHSPTLSPHSVSAGSVVSMSLNSPTSVVTLPNINGSIQSLTADMPVVVSLTPTPPPVTDDGVAGMRMSDDQSQRHQHFLQKSQDTSGDQCSPHSNPHSHANTSHQQTQSHQNGYQNVQQQQQQQQQMSKSHSPKSNPGTSGGGSRNSSASDMEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMFKWLQEPEFQRMSALRMAAAQIPQRTPLSVGTASGSGSAGAVSSTITATDSSPTIAMPTMTANALLSGSSSASSSSGAVASIANCRRKEEPQIEQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDAKNAMHSMQNRQQQQDHNQNPSNNLSHANYANIHTTALSPIGTFDDEADMELELESHDFDLVDEHDNEHDNSDEQSDML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00563685;
90% Identity
iTF_00487205;
80% Identity
iTF_00487205;