Basic Information

Gene Symbol
-
Assembly
GCA_009664405.1
Location
CM019043.1:14054739-14055169[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2 2.5e+03 -1.3 0.0 43 55 21 33 4 57 0.56
2 2 1.6e-08 3.5e-05 23.9 0.0 2 33 78 109 77 110 0.94

Sequence Information

Coding Sequence
ATGACCTCAAGCATCGATAGTGTGCGCGTGCTGCTGCAGTCGCTGCCTGCAGCGTCCGCCTTgggcggcagcaacaacaacgccCAGCAAATCGAACAGCAGTCACCGGCAAAGGGGCTTGGAatgcaagcaacaacaacgccTTTGCGCGCCAGAAATCCATaccaacagcagccgcagacTCCGGCGCCTTTTACGCCAGATAAAAGTGCAGGAAACCCTGCGTCGGCGCCCGAGGAGTTCTGGCGTGATCTGCAACAGTTCCACGAGCGACGCGGcacTCCATTGACCCATGCGGCCAAGATCAGTGGCAAGCATGTGGACTTTGTATAA
Protein Sequence
MTSSIDSVRVLLQSLPAASALGGSNNNAQQIEQQSPAKGLGMQATTTPLRARNPYQQQPQTPAPFTPDKSAGNPASAPEEFWRDLQQFHERRGTPLTHAAKISGKHVDFV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-