Basic Information

Gene Symbol
osa
Assembly
GCA_009664405.1
Location
CM019044.1:42545632-42569108[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-24 3.3e-21 75.2 0.0 3 89 1017 1103 1015 1103 0.91

Sequence Information

Coding Sequence
AtgaatgaaaaaataaaatcgcCGTCAACCCAGGGAGGTGCTGGGGCCGGAGCCCCCGCTGCTGCTCCGCCCGCGGCATCTGGTGGGAGTGcggccgctgcagcagcagccgccagcaGTGGTGCAGGTGCCggcggagtcggagtcggtgCCAATTCTGCATCCACGCCACCCACATCCGGCCCACCCACgcccaacaaaaacggcaGCGATCCGATCATACAGCAAAATGTCGGAGTGCCGCACCCCTACGGcgccccaccaccacctgGCTCGGCACCAGGTGCACCACCGGACCCGGTGGCGGTCATGCACTACCACCATctgcatcagcagcaacagcaacaacaacagcagcagcagcagcagcatccgccCCACATGCAGCATCACGGCGGGCCGGCGCCGCCGCCAGGAGCACCTGAGCATGCGCCCGGCGGCGTGAAGGACGAGTACGGTGCGGCGGTGGCTCACCTGCCACCGCCCCACGCTCATCCTGCCTACGCGCGCTACCACACGGGCGACCCCAACATGGATCCCTACCGCTACGGTCAGCCATCGCCCGGCGGCAAGCACCCGCAGCAgccccatcagcagcagcagcaaccacaacagcagcagcagccacccgGTGCGGGAGGCTCTCCCAATCGGccgccacaacagcagcagcagcaacgttaCATCCCTGGCCAGCCGCCGCAGGGGCCCACGCCCACGCTGAACTCCTTGCTGCAGTCCTCGAatccgccgccaccaccgcagCACCGCTATGCGAATAGCTACGATCCCCAGCAAGCGGCctcggcagcggcggcagcagcagcagcccaacagcaacaacaacagcaggcgGGAGGACCACCGCCTCCACCTCCAGGACATGgaccgccaccgccacagcATCAGCCATCGCCGTACGGAGCGCAACAGGGCGGCTGGGCACCGCCTCCACGACCCTACAGTCCACAGTTGGGGCCGTCGCAGCAGTATAGGACGCCACCACCGACAAACACTTCCAGGGGTCAGTCGCCCTATCCGCCAGCTCACGGTCAAAATTCAGGTTCCTATCCTAGttcgccgcagcagcagcaggcacaggcacaacagcagcagcagcaggcgggtCAGCAGCCTGGTGGCGCGGGACCGGGAGGACCTCCGCCGGGCGCCGCacagcaacagccgcagcagaaCACACCGCCAACATCTCAATATTCGCCGTACCCGCAAAGATACCCCACTCCGCCTGGACTGCCGGCCGCGGGACCCAATCATCGAACTGCCTATTCGACGCACCAGTATCCTGAACCGAATCGGCCCTGGCCTGGTGGCTCTTCGCCCAGTCCTGGTCCCGGACATCCATTGCCGCCCGCCTCCCCGCACCATGTGTCGCAgccactgcaacagcaacagccccCTCCGCCGCATGCCGCCGCCGGAGGACCCCCACCCAGCAGTCCAGGCCATGCGCCCAGTCCCTCGCCACAGCCCTCGCAGGCATCCCCCTCGCCGCATCAGGAGCTGATTGGTCAGAACAGCAACGACAGCTCTAGCGGCGGGGCGCACAGTGGCATGGGCTCCGGTCCTCCCGGCACACCCAATCCCCAGCAAGTGATGCGGCCCACCCCCTCACCAACTGGCTCATCCGGTTCGCGTTCCATGTCCCCGGCAGTGGCACAAAATCATCCAATCTCGCGTCCGGCGAGCAACCAGTCGAGCAGCGGAGGTCCCATGCAGCAGCCACCGGTGGGAGCCGGGCCACCGCCAATGCCCCCACATCCGGGTCTACCCGGCGGACCGCCTCAGCAGCAATCTCAGCAGGCCTCTAACTCGACTCCGCCGCCGGGACCGCCGCCCAGTCAAGGAATGAACAACATGGGCACGCCGCCACCTCCACCACAAGGTGCGTCCGCCGGGGGCTACCCGATGCCGCCGCACATGCACGGAGGTTACAAGATGGGCGGACCGGGACAGGGTCCAGGAGCGCAAGGTTATCCGCCGCAACAGCCGCAGCAATATCCACCAGGCAACTACCCGCCACGTCCGCAGTATCCACCTGGGGCCTACGCAACCGGACCCCCGCCGCCACCAACAAGCCAAGGCGCCGGCGGAGCCAACAGCATGCCATCTGGAGCCCAGGGCGGCGGTTATCCGGGACGGGCAATGCCCAATCACAGCGGCGGAAGTCCACACGGGCAGTATCCACCCTACCAGTGGGTGGCGCCGTCGCCTCAGCAGCAAGCCGGTGCTCCGCCTGGCGGCACGATGGTTGGCAACCACGTACAGGGCAAGGGCACACCGCCGCCTCCGGTGGTGGGACCACCGCCTCCTCAGGGCAGTGGCTCGCCCCGCCCACTCAACTATCTGAAGCAGCATTTACAGCACAAAGGTGGCTACGGAGGCAGTCCAACGCCACCGCAGGGACCGCAAGGCTACGGCAACGGGCCGACCGGAATGCATCCCGGCATGCCAATGGGTCCGCCTCACCACATGGGACCGCCGCACGGGCCCACCAACATGGGTCCGCCCACGAGTACCCCGCCCCAGTCGATGCTCGGGGGCCAGGGACAGCCGCCTGGCGGTCCGGAGACCGGTGGCCCCGAGCACATATCGCAGGACAACGGGATAAGCTCATCGGGCCCGACAGGCGCCACCGGTCTGCACCCGGTCACGGCGGTAGTCACCACTGGTCCTGATGGGACGCCCATGGATGAAGTCAGTCAACAGAGCACGCTCTCGAATGCATCAGCTGCCTCCGGCGAAGATCCGCAATGCACCACACCAAAGTCGCGCAAGAATGATCCCTATAGCCAAAGTCATTTAGCCCCTCCGAGCACGTCGCCCCATCCCGTTGTGATGCACCCGGGAAGCGGTGGCCCCGGCGAGGAGTTCGACATGAGTTCGCCACCCAATTGGCCGCGTCCGGCTGGCAGTCCGCAGGTGTTCAACAGCCATGTTCCCGTGCAGCAGGAGCCCTTTCGCAGCACGACAAAGAAGTCGGATTCCCTGTGCAAGCTGTACGAAATGGACGACAATCCAGATAGGCGAGGATGGCTGGACAAGCTGCGGTCATTCATGGAGGAGCGGCGGACGCCGATCACCGCCTGCCCAACCATCTCAAAACAGCCACTCGATTTATATAggttatatatttatgtaaaagAACGTGGCGGATTCGTCGAGGTATGCAAGGTGACCAAGAGCAAGACCTGGAAGGACATTGCCGGATTGCTGGGCATTGgggccagcagcagtgcaGCGTACACGCTGCGGAAGCACTACACCAAGAATCTGTTGACCTTCGAGTGCCACTTTGACCGCGGCGATATCGATCCCCTGCCCATCATACAGCAGGTGGAGGCGGGCAGCAAAAAGAAGACGGCCAAGGCCGCCTCCGTTCCTTCGCCAGGCTCGTCGAACTCGCAGGACTCATTCCCGGCACCGCCAGGCGCCGCCCCGAACGCTGCGATCGATGGTGGCTATGCTGGCTATCCGGGCGGCGGCAGTCCGTACCCTGGCGCCGCAGGTGGGCCGCAGCCGGACTATGCGGCGGCTGGCCAGATGCAGCGCCCGCCCTCGCAGAGTAACCCGCAGACACCTCATCCCGGCGCCGCCGTAGCTGTTGCCGCCGTCGGTGATAATATAAGTGTGAGCAATCCCTTTGAGGATACCATTGCTGGcgctggtcctggtcctggtgtTGGCCCTGGTCAAGGTCCAGGTACCGGTGGTCCTCCTGgtggtgttgttgctgctgttgtaggCGGTGccctgccaccgccacctccCCATTCACCGCACGCCGCACAGCagtcgcagccgcagcagcatccCCAGCATCCGGGACTGGCCGGGCCaccgccacagcagcagcagcagcagcagcagcaagcaccaCAACCACCGGGTGCTCCACCGGCGGGTGCACCACAGCAACATGGGACTGGGCCACCGGTGGTGCCACCGTCgccgcagcaccagcaacagcagcagcagcagcatgtgcGCCCAGCCGCCGGAGCCCCTTACCCGCAGGGTGGCTCCGCTTATCCCACGCCTGTGTCTAGAACGCCAGGCTCACCCTATCCAACACAACCCGGAGCTTATGGCCAGTATGGTGCGAGCGATCAGTACAATGCCACGGGGCCGCCTGGCCAGCCGTTTGGACAGGGACAAGGACAGTATCCGCCACAGAATCGCAATATGTACCCTCCCTATGGGCCGGAAGGGGAAGCTCCACCGGCTGGTGCCAATCAATATGGACCCTATGGCAGCCGGCCGTACAGTCAGCCCCCGACAGGGGGACCCCAGCCGCCGGCTCAGGCAGTTGCAGGCGGGCCACCGACAAGTGGATCACCTGTGGCGCCACCCACTGGCGGCTATGCACCGGGAACACCCACGCAGCAGGACTACTATCGGCCACCACCCGATCAGAGTCCGCAGCCGCGCAGGCATCCCGACTTCATCAAGGACCCACAGCCTTATCCAGGCTACAATGCAAGGCCACAGATTTACGGTGCATGGCAAGGCGGTGCGCAGCAGTATCGACCCCAGTATCCGACATCGCCCGCACCTCAGTCCTGGGGAAGTGCACCACCCCGTGGGGCAGCACCTCCACCTGGTGCCCCGCACGGTCCGCCGATACAACAGCCCGCAGGAGTGGCTCAGTGGGAGCAGCATAGGTATCCGCCGCAACAGgccccgccgccgcctccgcaacagcagcagcagcagcaacaacagccaccaTACCAGCAGGTCGCACCGCccggccaacagcagcagcaggcgcctCCCCAGTGGGCCCAGATGAACGCTGGCCAGCCCACGCAGCCCGGCATAGCGCCTCCAGGATCCCCGCTAAGACCACCGTCTGGACCGGCgagtcagcagcagcggatGCCCGGCatgccgccgcagcagcagcctccggGAAGCCAACAGCCACCGCAGCAACCGCCACACGGCGGCGTCCCCTCGCCAGGCATGCCCCAGGTGCCCGGAGGGATGGTGAAGCCACCGTATGCCATGCCACCGCCGCCATCTCAGACGGTGGGGGGCCAGCCTATCGGCCAGCCGGCTCCAGGTGGAATGATTCCGCAAAAGCAGCCACCCATCGTCGGTCCGGGAATGCCACAGCAGCCTCCCCACCAGCAGCATCCACATTCGCACCCACAGCATCCACAGCACCCACAGCATccccagcatcagcatcaactGCCGCCcaatcaacagcaacagcccgGCGGTGGCTATGCTCCGCAGGTGCCCGGAGGCGGGCCCGGGGCTCAGTTGGTGAAGAAGGAGCTGATCTTCCCGCACGACAGCGTTGAGTCGACGACACCGGTACTCTACAGGAGGAAGCGCCTGACCAAGTCGGATGTGTGCCCCGTGGACCCGTGGCGGATATTCATGGCCATGCGATCCGGACTGCTGACGGAGTGCACGTGGGCCCTGGATGTGCTCAATGTGCTGCTCTTCGACGACTCCACGGTGCAGTTCTTCGGCATCTCGAATCTGCCGGGCCTGCTCACACTGCTGCTGGAGCACTTCCAGAAGAATCTCGCCGAGATGTTCGACGAACGTTGCGAAGAGCCCCTGGACGAGGCGGAAGACGACGCGGACAGTGGCACGGTCATGGGAACGGGTGGCATCGAGCAAAGGGTGCGGGGCGGACGACAGAATCGGTGTGTACGGAGTATCTGCAGCTATAACCGGAAGCGTCACTACGAGAATATGGACCGGAAGAACGGTGGGAGCGATTCCGAGGACGCCGACGAAGGCATCGATCTGGGGCAGGTGAGAGTACAGCCAAACCCCGAGGAGCGATCGCTACTGCTCTCATTCACGCCCAACTACACGATGGTCACAAGAAAGGGTGTGCCTGTGCGCATTCAGGCGGCGGAGCAGGACATCTTCGTGGACGAGCGCCAGAAGGCGTGGGACATTGACACCAACAGGCTGTACGAGCAGCTGGAGCCGGTGGGCAGCAATGCATGGACCTATGGCTTCACCGAACCGGATCCTCTCGACGGCATCATTGACGTATTCAAGTCTGAGATCGTAAACATTCCATTCGCACGTTATGTCCGCTCCGAGAAGGTGAAAACGCGGCAGGACACTGGCCCAAGTGCTGCCACCAGTCCTAAGCCTCACATCAAGCAAGAGGAGAACATGACGAATAGCACCGAGGATGGCAGCGGCACTAATCTGCTCCAGGAGTCATTCAATAAGAAGCGGCGTCTGGTCAGCGGCGACAGTAACAGCGGTGAAGTCGGCGAAGGTTCTGGCGATATAAAAAAATCGAAGTTGGGTGACGAGATCGCCGCCCCGCCAAGCGTCGAAGTGAAGAAGGAACCAGGAACCTCCGGCACGACGGACACCAGTGACAGCGATTGTCGAGCCGTTGACATGGAGATCGAGTCGCCCAGCCTGCAGCAACAGCGTCTAACCAATGGAATAGCTTCCTCCTCTCCGCCCTTGGCAAGCGCATTCGATCCCAAAGCGACGGTGCGTGATGCGGCGCAAGTGCTGCAGCGGAAACGCGACTCCAGCTACGAGGACGAGTGCTACACGCGGGACGAGGCCTCGCTCTACTTGGTTAACGAGAGCCAGGACTCGCTAGCACGTCGCTGCATCGCCCTCTCGAACATTTTTCGCAATCTGACCTTTGTGCCCGGCAACGAGACGGTGCTGGCCAAGTCCACACGGTTCCTAGCCGTTCTGgggcgcctgctgctgctaaacCACGAGCACCTGCGGCGCACCCCCAAGACGCGCAACTACGACCGGGAGGAGGACACGGACTTCAGTGACTCGTGCAGCTCGCTGCAGGGGGAGCGCGAGTGGTGGTGGGACTACCTGATCACCATTCGGGAGAACATGCTAGTGGCCATGGCCAATATAGCCGGACACCTGGAGCTCTCCCGGTACGACGAGCTGATCGCCCGTCCACTAATCGACGGACTGCTTCACTGGGCCGTTTGTCCCAGCGCCCACGGCCAGGATCCGTTCCCCTCGTGCGGCCCCAATTCTGCGCTCTCACCCCAGCGCCTAGCACTGGAGGCGCTCTGCAAGCTGTGTGTGACGGATGCGAACGTGGACTTGGTCATTGCGACGCCACCGTTCTCCCGCCTCGAGAAGCTGTGCGCCGTGCTGACGCGCCACCTATGCCGCAACGAGGACCAGGTGCTCCGCGAGTTCTCTGTGAATCTGCTGCACTACCTGGCCGCGGCGGACAGTGCCATGGCGCGGACGGTGGCTCTGCAGTCGCCGTGCATTTCGTATCTGGTGGCCTTCATCGAGCAGGCCGAGCAGACGGCCCTGGGCGTGGCCAACCAGCACGGACTCAACTTTCTGCGAGAGAACCCCGATTCGATGGGCACCAGCCTGGACATGCTACGGCGGGCAGCCGGCACACTGCTGCACCTGGCCAAGCATCCGGACAACCAGTCGCTCTTcatgcagcaggagcaacggCTCCTGGGACTGGTCATGTCACACATTCTCGACCAGCAGGTGGCCCTGGTCATCTCGCGGGTGCTGTACCGCGTGTCGCGCGGAGCCAGCCGGATGCACTCCGTGGAGTTTAGACTGTtacaacagcggcagcagcagcaacagcttcaACAGCTGCGTCCTGCGGAGAATCAAGCTCTGGCTGCAAGtgcggaggcagcagcagtggcagcggcagccagcagcagcggagtgAAATTGGAATCTGGGAGTGGAGCTGAGCCGAATGCTGAGCCAAGTGGCGCCGAAGTCAAGCCCTCGCCAGCAGCCATATCCACATGCACGTcttcatccacatccacatcgggCAGCGGAATGATCTCCACAGCGGCGATCAACGAtgagaacagcaacagcagccagcaactgCCGCCGGCAGCCACCTTCAACGACgtgagcaacagcagcaccaacagcaacagctgcgggacagccagcagcaaccagaCGAACAACAGtaccaccaacagcagcagtaacagcagccTGGGCAGCCAGTCCAACTCCACCATGAACAATGCCGCCCCAACTGCGACCACGCCAGCAGCCCACGCAACTCCACCATCGGtcgccgagcagcagcagcagcagcagcagcaggtgagcaaagccgccgccgcagccgcACTGGTGTCGTCGAACCTTAGCGGGAGCCTGAGCAATGCCAATTCAGCCGCATCTCCTGTTCTGGCGCCgcctccctcctcctcctcatcgagTGCGGCCTCCGCCACAGCCGTGTCGCAGCCGgcggcaccaccaccaacgaATGCGGGAACGACGACAGCCGTTGCGTAG
Protein Sequence
MNEKIKSPSTQGGAGAGAPAAAPPAASGGSAAAAAAAASSGAGAGGVGVGANSASTPPTSGPPTPNKNGSDPIIQQNVGVPHPYGAPPPPGSAPGAPPDPVAVMHYHHLHQQQQQQQQQQQQQHPPHMQHHGGPAPPPGAPEHAPGGVKDEYGAAVAHLPPPHAHPAYARYHTGDPNMDPYRYGQPSPGGKHPQQPHQQQQQPQQQQQPPGAGGSPNRPPQQQQQQRYIPGQPPQGPTPTLNSLLQSSNPPPPPQHRYANSYDPQQAASAAAAAAAAQQQQQQQAGGPPPPPPGHGPPPPQHQPSPYGAQQGGWAPPPRPYSPQLGPSQQYRTPPPTNTSRGQSPYPPAHGQNSGSYPSSPQQQQAQAQQQQQQAGQQPGGAGPGGPPPGAAQQQPQQNTPPTSQYSPYPQRYPTPPGLPAAGPNHRTAYSTHQYPEPNRPWPGGSSPSPGPGHPLPPASPHHVSQPLQQQQPPPPHAAAGGPPPSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPPVGAGPPPMPPHPGLPGGPPQQQSQQASNSTPPPGPPPSQGMNNMGTPPPPPQGASAGGYPMPPHMHGGYKMGGPGQGPGAQGYPPQQPQQYPPGNYPPRPQYPPGAYATGPPPPPTSQGAGGANSMPSGAQGGGYPGRAMPNHSGGSPHGQYPPYQWVAPSPQQQAGAPPGGTMVGNHVQGKGTPPPPVVGPPPPQGSGSPRPLNYLKQHLQHKGGYGGSPTPPQGPQGYGNGPTGMHPGMPMGPPHHMGPPHGPTNMGPPTSTPPQSMLGGQGQPPGGPETGGPEHISQDNGISSSGPTGATGLHPVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYSQSHLAPPSTSPHPVVMHPGSGGPGEEFDMSSPPNWPRPAGSPQVFNSHVPVQQEPFRSTTKKSDSLCKLYEMDDNPDRRGWLDKLRSFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLTFECHFDRGDIDPLPIIQQVEAGSKKKTAKAASVPSPGSSNSQDSFPAPPGAAPNAAIDGGYAGYPGGGSPYPGAAGGPQPDYAAAGQMQRPPSQSNPQTPHPGAAVAVAAVGDNISVSNPFEDTIAGAGPGPGVGPGQGPGTGGPPGGVVAAVVGGALPPPPPHSPHAAQQSQPQQHPQHPGLAGPPPQQQQQQQQQAPQPPGAPPAGAPQQHGTGPPVVPPSPQHQQQQQQQHVRPAAGAPYPQGGSAYPTPVSRTPGSPYPTQPGAYGQYGASDQYNATGPPGQPFGQGQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGSRPYSQPPTGGPQPPAQAVAGGPPTSGSPVAPPTGGYAPGTPTQQDYYRPPPDQSPQPRRHPDFIKDPQPYPGYNARPQIYGAWQGGAQQYRPQYPTSPAPQSWGSAPPRGAAPPPGAPHGPPIQQPAGVAQWEQHRYPPQQAPPPPPQQQQQQQQQPPYQQVAPPGQQQQQAPPQWAQMNAGQPTQPGIAPPGSPLRPPSGPASQQQRMPGMPPQQQPPGSQQPPQQPPHGGVPSPGMPQVPGGMVKPPYAMPPPPSQTVGGQPIGQPAPGGMIPQKQPPIVGPGMPQQPPHQQHPHSHPQHPQHPQHPQHQHQLPPNQQQQPGGGYAPQVPGGGPGAQLVKKELIFPHDSVESTTPVLYRRKRLTKSDVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISNLPGLLTLLLEHFQKNLAEMFDERCEEPLDEAEDDADSGTVMGTGGIEQRVRGGRQNRCVRSICSYNRKRHYENMDRKNGGSDSEDADEGIDLGQVRVQPNPEERSLLLSFTPNYTMVTRKGVPVRIQAAEQDIFVDERQKAWDIDTNRLYEQLEPVGSNAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYVRSEKVKTRQDTGPSAATSPKPHIKQEENMTNSTEDGSGTNLLQESFNKKRRLVSGDSNSGEVGEGSGDIKKSKLGDEIAAPPSVEVKKEPGTSGTTDTSDSDCRAVDMEIESPSLQQQRLTNGIASSSPPLASAFDPKATVRDAAQVLQRKRDSSYEDECYTRDEASLYLVNESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHEHLRRTPKTRNYDREEDTDFSDSCSSLQGEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNSALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGLNFLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNQSLFMQQEQRLLGLVMSHILDQQVALVISRVLYRVSRGASRMHSVEFRLLQQRQQQQQLQQLRPAENQALAASAEAAAVAAAASSSGVKLESGSGAEPNAEPSGAEVKPSPAAISTCTSSSTSTSGSGMISTAAINDENSNSSQQLPPAATFNDVSNSSTNSNSCGTASSNQTNNSTTNSSSNSSLGSQSNSTMNNAAPTATTPAAHATPPSVAEQQQQQQQQVSKAAAAAALVSSNLSGSLSNANSAASPVLAPPPSSSSSSAASATAVSQPAAPPPTNAGTTTAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00484232;
90% Identity
iTF_00563681;
80% Identity
-