Basic Information

Gene Symbol
grh
Assembly
GCA_009664405.1
Location
CM019043.1:5840048-5864124[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.093 6.8e+02 -0.9 0.5 77 110 317 350 309 364 0.64
2 2 1.8e-63 1.4e-59 200.8 0.4 24 221 479 671 465 673 0.94

Sequence Information

Coding Sequence
ATGGACTCGTTGCATTCGGCTCCGGGGCAAAGCGAActccaggagcagcagcccatCCATTCGCACTACCAGGATCATGGCTTAAGTTtgtccctgccactgccactgcctcagcATCAGCAGCCTGTCCTTGCCACCGCAGACCACCTACTGCTaaacgaggagcagcagcaccatcctGCCCCACAATCCATGGCCAGTCCAGCTCCAGGGCACTATCCCATCTACAGCTACTATCGCCAGCAGAGCCACGAGGCCGCCAAGGAaaccaataacaacaacaacaacaccgaTCCCCATGGGACAGAAATGCTGTGGAGGGAGCCGGAGGATCTGCGCAAGGATCCGAAGAACGGTAACATTGCCGGAGCGGCGGCAGCGAACGGCGGAGCGGGTTCGGTTATAACGCAAAAGATCTTGCATGTGGATGCGTCGCCACCAGCCGACGAAGCTGAGATTAGCGAGATtagccacagacacagacccaGCACACCCTGCACCACCAGAACCAGCAGTAGTAGTCCTGCCACCGAACTAGAGATGTATGCTACCACGGGCGGCACACAGATTTACCTACAGACCTCACATCCCAGCACGGCCAGCGGCgcgggaggaggaggcggcggcggcagcggtggTGGCGGATCTGGAGGAGCCGGCGCCCTGCAGGCACAGAGCCCCAGTCCGGGCCCGTACATAACCGCCAACGACTATGGGATGTATACGGCCAGCCGACTGCCGCCCGGACCACCGCCCACCACCGCCACAACCTTCATAACGGAGCCCTACTACCGGGAGTACTTTGCGCCGGACGGACAGGGCGGCTATGTGCCCGCCTCCACGCGCACTCTCTACGGCGATGTGGACGTTTCGGTGTCGCAGCCAGGCGGAGTGGTCACCTACGAGGGCCGATTCACAGGCAACGCCCCCccgcccaccaccaccacactgCTCACGAGCAGCGTCAGCgtgcaccaccagcagcagcagcagcaacagcagcagcaacaacagcaacagccccaacaccagcagcacctccaccaacagcagcagcagcaacaccaccaccCGCAGGACGGCAAGGGCGGCGGCACGCCACTCTATGCCAAGGCCATCACGGCGGCGGGACTCACCGTCGATCTGCCCAGTCCCGATTCGGGCATCGGCACAGATGCCATTACGCCGCGGGATCAGACCAACATACAGCAGTCCTTCGATTACACGGAACTATGCCAGCCGGGCACCCTCATCGATGCCAATGGCAGCATACCCGTGTCCGTGAACAGCATCCAGCAGCGGACAGTGGTCCATGGCAGCCAGAACAGTCCCACCACCTCCCTGGTGGACACGAGCACAAACGGTTCGACGCGTTCACGGCCCTGGCACGACTTTGGCCGCCAGAACGATGCcgataaaatacaaataccaAAAATATTCACAAATGTTGGCTTCCGCTATCACCTGGAGAGCCCCATCAGCTCGTCACAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGCCAGTTCTATGGTATAACGCTGGAGTATGTGCATGATGCGGATAAGCCCATTAAGAATACGACGGTTAAGAGTGTGATCATGCTGATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGCCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGCCTGGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTTTACTGGAATCCACTGGAGAGCTCCGCCAAGatcAACATTGCGGTGCAGTGCCTGAGCACGGATTTCAGCAGTCAAAAAGGAGTCAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGGCCGTCTTCCACCGGGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGCAAGACGCGCGATGAGGAGCGACGGGCCGCCAAGCGAAAGATGACGGCCACCGGCAGAAAGAAGCTGGATGAGCTCTACCATCCGGTGACAGATCGGTCCGAGTTCTATGGCATGCAGGACTTTGCCAAGCCGCCGGTGCTCTTCTCGCCCGCCGAGGACATGGAGAAGGTAGGTCAGCCGGGCCTGACTGGCTTGACATTCATCCacacgaatacgaatacgcacacgaatacgaatacgaactcgaactcgaactGCAACTCCAACTCGAATTCGCCCTTGCAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGTGCCTCGCCGTTCCTGCTCCACGGCCAGAAGGTGGCCACGCCGACGCTCAAATTCCACAATCACTTTCCGCCCGACATGCAGACCGATAAAAAGGATCACATACTGGATCAGAATATTATGACCAGCACACCCATGACCGACTTCGGTCCGCCCATGAAGCGGGGACGCATGACGCCGCCAACCTCGGAGCGTGTGATGCTGTATGTGCGGCAGGAGAACGAGGAGGTCTACACGCCGCTCCATGTGAttgaaaacaaatacaaaatctCAACAACGAGCATAAATAACATTTATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGATATGATATCGTTCTACTGCAATGAGGATATCTTCTTGCTGGAGGTGCAACAGATCGAGGACGATCTGTACGATGTGACACTGACGGAGCTGCCCAATCAGTAG
Protein Sequence
MDSLHSAPGQSELQEQQPIHSHYQDHGLSLSLPLPLPQHQQPVLATADHLLLNEEQQHHPAPQSMASPAPGHYPIYSYYRQQSHEAAKETNNNNNNTDPHGTEMLWREPEDLRKDPKNGNIAGAAAANGGAGSVITQKILHVDASPPADEAEISEISHRHRPSTPCTTRTSSSSPATELEMYATTGGTQIYLQTSHPSTASGAGGGGGGGSGGGGSGGAGALQAQSPSPGPYITANDYGMYTASRLPPGPPPTTATTFITEPYYREYFAPDGQGGYVPASTRTLYGDVDVSVSQPGGVVTYEGRFTGNAPPPTTTTLLTSSVSVHHQQQQQQQQQQQQQQPQHQQHLHQQQQQQHHHPQDGKGGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKVGQPGLTGLTFIHTNTNTHTNTNTNSNSNCNSNSNSPLQSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNIMTSTPMTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00593616; iTF_00535825;
90% Identity
-
80% Identity
-