Dbia008501.1
Basic Information
- Insect
- Drosophila biarmipes
- Gene Symbol
- srp
- Assembly
- GCA_018148935.1
- Location
- JAECYG010000101.1:18862273-18872223[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3 9.2e+03 -3.9 0.4 1 4 242 245 242 249 0.82 2 2 3.4e-20 1e-16 60.0 4.4 1 35 330 363 330 364 0.97
Sequence Information
- Coding Sequence
- ATGACGAAAACGACTAAGCCCAAGGAGAAGGCGGCGGGGGGCCTGTACGAGCACTACGCCAGCACTACGGATCCCATCATGCGGAACAACTTTGCGCTGTACAGCGTCTACGGCGGCGGCGGCGTGGGCGTGGGCATGGCCAGCCACGAGCACTTGGTCGCGGCAGCAGCAGCTGCAGCGGCCCAGGGCACAACGCCCAACATTGACGAGGTCATCCAGGACACGCTGAAGGACGAGTGCTTCGAGGACGGGCACAGCAGCAACTACCATGTGCTGACCTCCAGATTCACCCAGCTGACCAGCGCCAGCCAGCGGGACAGCCTCTCGCCGGAGAACGAGGCGTACTTTGTGGCCACCCAGCCAGCCAGCAGCTTGCAGAACAGCTCTGTCTATGCTGGCTCCTTGCTCACCCAGACGGCCAATGGCATTCCCTACGGCATGCATGGCGCCGAACGCTACGCTCCAATGAGCAATTACCGCTGTCAGAACGAACCCTGGTTCGATCAGGTGGGGGGCTACTCCTCGGGGGGCCAGGCGCAACTGGGCGTCGGAGTCGGACCCGGAGTGGTGACCAATGTGATACGGAACGGCAGGGCCATCTCGGCGGCCAATGCAGCAGCCGCCGCGGCTGTGGATGGCAGCACTCCCGGAGCCTTCCTCTCCGCCTCGGCATCCTTGTCAGCAACATTATTCGATGCCGATTATTTCACTGAGGGGCGAGAATGTGTCAATTGTGTGGCCGCTGAATCAGGCGGGGATTTCTATAAGGCCAACTCATTTAATGTGGGCGGCGGTGGCCGTAGTAAGGCCAACCCGAGTGGTGCCCCCACCGCGCAGGCCTACTCCTCCTGTCCAGGCTCGAGTGCGACCTCGGCGACTTCGGCGGTGGCGTCGGGAACGGGAGCCACTGCAGCCACGACGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCCAAGAGGGCCGGACTATCGTGCTCCAATTGCCACACCACGCACACGTCCTTGTGGCGCCGCAATCCCGCCGGAGAGCCCGTCTGCAACGCCTGCGGACTGTACTTCAAGCTCCACAATGTCAACCGACCGCTGACCATGAAAAAGGACACCATTCAGAAACGCAAGCGCAAACCAAAGGGTTCCAAGAGCGAAAAGTCCAAGTCCAAGTTGAAGAACGCCCTGAACGCCACCATGGAGAGCGGCTCCCTGGCGGCCAGCTGCCACAATGTGGGCCTCGGCCTGGACAGCAGCCAGATGGACGTGAACGATGACATGAAGCCACAGCTCGACATGAAACCATACAACTCATACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCAAGACGGAGGCGACGGCGGCGCGGGAAACCGTGGTGAAGATGGAGTAG
- Protein Sequence
- MTKTTKPKEKAAGGLYEHYASTTDPIMRNNFALYSVYGGGGVGVGMASHEHLVAAAAAAAAQGTTPNIDEVIQDTLKDECFEDGHSSNYHVLTSRFTQLTSASQRDSLSPENEAYFVATQPASSLQNSSVYAGSLLTQTANGIPYGMHGAERYAPMSNYRCQNEPWFDQVGGYSSGGQAQLGVGVGPGVVTNVIRNGRAISAANAAAAAAVDGSTPGAFLSASASLSATLFDADYFTEGRECVNCVAAESGGDFYKANSFNVGGGGRSKANPSGAPTAQAYSSCPGSSATSATSAVASGTGATAATTLDEHVSRANSRRLSASKRAGLSCSNCHTTHTSLWRRNPAGEPVCNACGLYFKLHNVNRPLTMKKDTIQKRKRKPKGSKSEKSKSKLKNALNATMESGSLAASCHNVGLGLDSSQMDVNDDMKPQLDMKPYNSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTEATAARETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -