Basic Information

Insect: Drosophila biarmipes
Gene Symbol: -
Assembly: GCA_018148935.1
Location: JAECYG010000274.1:8524588-8526393[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.19 11 6.4 0.1 1 23 381 403 381 403 0.97

2 7 4e-06 0.00024 21.1 0.2 1 23 409 431 409 431 0.98

3 7 6.1e-07 3.6e-05 23.7 0.3 2 23 438 459 437 459 0.97

4 7 0.0015 0.087 13.1 7.4 1 23 465 487 465 487 0.98

5 7 0.0005 0.03 14.6 1.2 2 23 494 515 494 515 0.97

6 7 2.9e-05 0.0017 18.4 2.7 2 23 522 543 521 543 0.96

7 7 1.2e-05 0.0007 19.7 0.1 1 23 549 571 549 571 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.19	11	6.4	0.1	1	23	381	403	381	403	0.97
2	7	4e-06	0.00024	21.1	0.2	1	23	409	431	409	431	0.98
3	7	6.1e-07	3.6e-05	23.7	0.3	2	23	438	459	437	459	0.97
4	7	0.0015	0.087	13.1	7.4	1	23	465	487	465	487	0.98
5	7	0.0005	0.03	14.6	1.2	2	23	494	515	494	515	0.97
6	7	2.9e-05	0.0017	18.4	2.7	2	23	522	543	521	543	0.96
7	7	1.2e-05	0.0007	19.7	0.1	1	23	549	571	549	571	0.98

Sequence Information

Coding Sequence: ATGCCGCCGTACCAGCGCTGCGGCGACATCGTGTGGGTGACCAAGAGGCAGACGCGCTCCTTCGCCTTCCAGTGCATCTACTGCCAGGACAACAGGACGAGCACCTTCAAGGACTTCAAGTTGCACCTGGAGTCGCAGCACTCCGAGCTGTTCCAGGATGAAGGAAGGAAGGACGTAAAGCTCGTTTCCTTGGCACCCGAGAAACGGGCACTGCGCAGCGGAGCTGGCCGAGATCAGGAGGCAGTGCTCCCACCCAAGGAAGAGGATCCCTTGGCCACGCAGGACACAGATGGGTTGGGTAAGGAGGAATTCCTGCCTGAAGAGAGTCCCGAGGGAAATGAGACTGAGTTTCCGGTGGAACAGGAGGAGGACACCCTGCTGGACTGGCCGGAAAGCGATAGCCAGAGCATAGCATCCCTGCAGTCCAGCCAGGAGGAGCAAACCTCCGTGGACACCTCGCACTTCTGGCTGCTGGAGCACCCCATCATGCTGGCCTTCATCGACCAGCTGGAGCAGCAGCCGCAGCTCTGGGACCTGGGCATGGTGACCTACCGGAACTACAGGCACCGCAGCCTGGCCTGCGAGAAGATCGCCGCTGGCCTCAGTGACCAGTTTGGACTGAAAATGTCCCGCCAGGAGATTGCCACCCACGTCAAGCAGCTGAAGGATGTCTATATCAAGGAAAAGCTGCGCCTGGAGCTCACTACAGATCCACCAGCCAGTCCCGAGTGGTATTACGAGCGGCTGCACTTCCTGGTGAGGAGCCTGCGGCGTCCGAAGCATCCCAACATGCTGGGCAACGGCGCTGAGCTGCTGGCTGTGCCCCACCTGAATCATGCCCAGAACTTGAAGCTCATCGAGCTGTACCGCCAGTGCAGCGAAAGCTGGGACATGCAGGACCTCGCCTGCCGGATGGGCAATGTGCGGGGGGAGGCCAAGGATCGCCTGCTGGAGCTGTGCCGCACTGAACTGCAGATCCCACTCGATCCCTCGCAGCTGCAGCGTTTCGTTCGCCGCCTGAGGAGCACTTACCACCAGGAGAAGGTGCGCCGACTGCGCAGCGAGCGGGAGGGCAAGGTGTTCCGCTCCCGTTCTCGCTACTACGAGAAGTTGCGCTTCCTGGAGGACCACATGGCGCCCTTTCAGTGCGACGTGTGCCAGGAGCTGGTGAACAGCGTGGACGGCTACAAGGTGCATCGGGCCAAGCACGACGGCAGCCTGCCCTTCGTGTGTCCCACCTGCGGCAAGGGCTTCACCAAGGTGGGCAATGTCACCATTCACTTGCGCCGCCACACGCAAGACTACCACTTGAGCTGCGAGGAGTGCGGCAAGCGGTTCGCCACCAGCACCGATCTCATCGTCCACCGGCGTTCGCACACCGGCGAGCGACCCTACTGCTGTCACATCTGCGGCGGGCGCTTCAGCACCGTCTCCTTCTTCAAGCGGCACAAGCGGCGGCACGAGCAGCGCCCGGTGGCCAAGTGCCACATCTGCGGCAAGGGCTTCTTCGAGCGAACCGTCCTAAGGGACCACATCAAGGGGCACCTGAACGTGCGCGACAAGGAGTGCGATGTGTGCCACAAGCGCTTCACCAGCGCCAAGTACCTCAATCGCCACAAGGAGATCCACGCCGAGCACAAGAAGTACGTGTGCAAGCTCTGCGGCAAGGGCTTCGCCCAGTATGCAGGCCTCAAGGGACACCTGAAGTCGCACGACCGAAAGAAAATCAAAGCCGGCGAGGAGGTGCCCAAGTGA
Protein Sequence: MPPYQRCGDIVWVTKRQTRSFAFQCIYCQDNRTSTFKDFKLHLESQHSELFQDEGRKDVKLVSLAPEKRALRSGAGRDQEAVLPPKEEDPLATQDTDGLGKEEFLPEESPEGNETEFPVEQEEDTLLDWPESDSQSIASLQSSQEEQTSVDTSHFWLLEHPIMLAFIDQLEQQPQLWDLGMVTYRNYRHRSLACEKIAAGLSDQFGLKMSRQEIATHVKQLKDVYIKEKLRLELTTDPPASPEWYYERLHFLVRSLRRPKHPNMLGNGAELLAVPHLNHAQNLKLIELYRQCSESWDMQDLACRMGNVRGEAKDRLLELCRTELQIPLDPSQLQRFVRRLRSTYHQEKVRRLRSEREGKVFRSRSRYYEKLRFLEDHMAPFQCDVCQELVNSVDGYKVHRAKHDGSLPFVCPTCGKGFTKVGNVTIHLRRHTQDYHLSCEECGKRFATSTDLIVHRRSHTGERPYCCHICGGRFSTVSFFKRHKRRHEQRPVAKCHICGKGFFERTVLRDHIKGHLNVRDKECDVCHKRFTSAKYLNRHKEIHAEHKKYVCKLCGKGFAQYAGLKGHLKSHDRKKIKAGEEVPK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00605052;
90% Identity: iTF_00605052;
80% Identity: -