Basic Information

Insect: Drosophila biarmipes
Gene Symbol: bab2
Assembly: GCA_018148935.1
Location: JAECYG010000079.1:23317891-23346227[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.4e-17 6.4e-14 51.1 0.0 1 43 652 695 652 697 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.4e-17	6.4e-14	51.1	0.0	1	43	652	695	652	697	0.95

Sequence Information

Coding Sequence: ATGGACATGACCAAACAGATTGTGGACTTTGAGCTTAAGTCGGAGCTCATCGAGATGGATCAGTTCGAGGCCAGTGACTACACGATGGCGCCCTTGGAGGAGCCCAAGATGGTGGTGGAGCCCCAGTCGGAGGAGCCAGAGGACACAGACAGGAAATACTCCCCCGAGAGGGTGGTGGAGACCTCTTTGGAGGATCAAAGGCAGGATGCAAGCCAGACAGAAAAGGAAACAGATGTAAAATCACCCGAAAAAGATACAGCCTCAGTGCTGGTCAAACCGAAGGCCAGCCTGATGAACGATCCTCCGCTGACCCCGCCCCCACGACCGCTGACCTGCAGCGAAGTGGTGGGCCTGCGGGATCCCGATGACCCCGAGCTGCGCCTGCGCCTGGAGGCCAAGAAGTCGCGCTCCCTGCCAGTCTCCCCACAGCCCCAGCAGAGCCTCAAGCTAGCCGGCTCCGCACTCTTCGAATTTGGCCAGCGATCCTCGCCAGTGGAGGCCAAGATCAAGGCGAATCCCGAGGTAAAGGCCCCCAGGAGGAAGATGGTTCCCCCCAGCGGCGGTGGCGACAATCAGCAGTTCTGCCTGCGGTGGAACAACTACCAGTCCAACCTAACCAACGTCTTTGATGAGCTCCTGCAGAGCGAATCCTTCGTGGACGTGACCCTCTCCTGCGAGGGTCAGTCGATCAAGGCCCACAAGATGGTCCTCTCCGCCTGCTCACCCTACTTCCAGGCCCTGTTCTACGACAATCCCTGCCAGCACCCCATCATCATCATGCGGGATGTCAACTGGTCGGACCTGAAGGCCCTCGTGGAGTTCATGTACAAGGGGGAGATCAACGTGTGCCAGGACCAGATAAATCCGCTGCTCAAGGTGGCCGAGACCCTGAAGATCAGGGGTCTGGCGGAGGTGAGTGCGGGCAGGGGCGACGGTGGCGCCTCCGCAGACCCCATGTCCGTCTACGACGACGAGGATGAGGAGGAGGAAATGGCCTCGGCCACAGCGATTCTGCGGCAGGACGATCACCCTGATCCGGAGGAGGAGATGAAGGCCAAGAGGCCCAGGCTGCTGGCCGAGGGAGCCCTGGATCTGAACCAGAGGCAGAGGAAGCGATCCCGGGACGGCAGCTATGCCACTCCGAGTCCCTCGCTGCAGGGCGTGGAGTCCGAGATCTCCGAGAGGGGCTCCACCTCCACCCCTGCACAAAATCAGAGCCAACCGCTGGCCATGACCACCTCGACCATAGTGAGGAATCCCTTCGCCTCACCCAACCCCCAGACCTTGGAGGGCAGGAACTCGAGTGTGGGCGGCAACCAGAGGAACTCGCCACCACCGCAAGGTCACAGCAACGGAAACGGAGGCGCCACCATGCACTCCCCGCCCGGCGGAGTGGCCGCCCAGTCCGCCCTGCCACCCCACATGGCCGCCGCCGTGGCAGCCGCCGCCCACCACGCCGCCGTCGTGCCCCCTCCCCCGCCAGCCATGCACCACCATGCCGCCGCCGCTGCCGCCCAGCAGCTGGCCGCCCAGCACCAGTTGGCCCACTCGCATGCCATGGCCAGCGCCTTGGCCGCCGCAGCCGCCGGAGCGGGCGCAGCAGGAGGAGCGGGTGCCGCGGGATCCGGCAGTGGATCCGGAGCCAGTGCTCCAGCCGGCGGAGCAGGAGCAGCGGGAAGCGCCTCTGCCTCGTCCGTGGGCTCCCATCACGACGACATGGAAATCAAGCCAGAAATCGCCGAGATGATTCGCGAGGAAGAGAGGGCCAAGATGATCGAGAGCGGAGGACACGGCGGCTGGATGGGAGCTGCAGCCGCTGCCACCGGAGCAGCTTCAGTGGCGGATAGCTACCAGTACCAGCTGCAGTCCATGTGGCAGAAGTGCTGGAACACCAACCAGCAGAACCTGGTGCAGCAGCTGAGGTTCCGCGAGCGGGGACCCCTGAAGTCCTGGCGCCCGGAGGCCATGGCCGAGGCCATCTTCAGTGTCCTGAAGGAGGGTCTCTCCCTGTCCCAGGCAGCCCGCAAGTTCGACATCCCCTACCCCACCTTCGTCCTCTATGCCAACCGGGTGCACAACATGCTGGGTCCCTCCCTGGATGGCGGGGCCGATCCTCGACCCAAGGCCAGGGGTCGACCCCAGCGCATCCTGCTGGGCATGTGGCCCGAGGAGCTCATCCGGAGCGTCATCAAGGCGGTGGTCTTCCGGGACTATCGCGAGATCAAGGAGGAAATGGGCGCCCACCAGTACGCCAACGGACAGGCCCATGGTCAGACCTATATAGGCGGAGGCACCACCTCGAATGGCTATCACAGTGCTGCGGCGGCCAAGATGGCGGCCCAGAACGCCTCGCTGGCTCCTCCGGGCGCGGGAAGTCCGCTGAGCTCCATGACGGAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCAGTCCATGAACATGTACAAGTCGCCGGCCTATCTGCAGCGATCCGAGATCGAGGATCAGGTGTCCGCAGCGGCGGCCGTGGCAGCGGCGGCGGCCAAGAACCAGCAGAGGGGGTCGGAGAACCTGCCCGACCTGAGTGCCCTGGGGCTGATGGGCCTGCCCGGCCTGAATGTGATGCCCCCCCGGGGATCGGGCGGAGGCAGTGGCGGCGCGCCGCCCAACAGTGCCGCCTCCTATGCCCGCGAGCTGTCCCGCGAGAGGGAGCGCGATCGGGAGCGGGAGCGGGAGAGGGAGCTGTCCCGCCAGTACGGCAGCCAGTCCCGGGGGTCGAGTTCAGGGTCCGGCAGCGCCAAGTCCCTGACCGCCAGCCAAAGACCGGGAGCCGCCTCGCCCTACTCCGCCGCCCACTATGCGAAGCACCAGGCGAGTGCCTACAACAAGAGGTTTCTCGAGAGCCTGCCCGCCGGCATCGACTTCGAGGCCATTGCCAACGGACTGCTCCAGAAGTCGGTGAACAAGAGCCCCCGCTTCGAGGACTTCTTCCCGGGACCAGGCCAGGACATGAGTGAGCTCTTCGCCAATCCTGATGCGGCTGCCGCTGCTGCGGCCTCTGCCTATGCGCCTCCTGGAGGAGCAGGCGGTGGAGGAGCCATCCGGGAGCCGCCCCTCATGAAGATCAAGCTGGAGCAGCAGCACGCCACCGAACTGCAGCACGAGGATTGA
Protein Sequence: MDMTKQIVDFELKSELIEMDQFEASDYTMAPLEEPKMVVEPQSEEPEDTDRKYSPERVVETSLEDQRQDASQTEKETDVKSPEKDTASVLVKPKASLMNDPPLTPPPRPLTCSEVVGLRDPDDPELRLRLEAKKSRSLPVSPQPQQSLKLAGSALFEFGQRSSPVEAKIKANPEVKAPRRKMVPPSGGGDNQQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVNWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGDGGASADPMSVYDDEDEEEEMASATAILRQDDHPDPEEEMKAKRPRLLAEGALDLNQRQRKRSRDGSYATPSPSLQGVESEISERGSTSTPAQNQSQPLAMTTSTIVRNPFASPNPQTLEGRNSSVGGNQRNSPPPQGHSNGNGGATMHSPPGGVAAQSALPPHMAAAVAAAAHHAAVVPPPPPAMHHHAAAAAAQQLAAQHQLAHSHAMASALAAAAAGAGAAGGAGAAGSGSGSGASAPAGGAGAAGSASASSVGSHHDDMEIKPEIAEMIREEERAKMIESGGHGGWMGAAAAATGAASVADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKFDIPYPTFVLYANRVHNMLGPSLDGGADPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEEMGAHQYANGQAHGQTYIGGGTTSNGYHSAAAAKMAAQNASLAPPGAGSPLSSMTETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAAKNQQRGSENLPDLSALGLMGLPGLNVMPPRGSGGGSGGAPPNSAASYARELSRERERDRERERERELSRQYGSQSRGSSSGSGSAKSLTASQRPGAASPYSAAHYAKHQASAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGPGQDMSELFANPDAAAAAAASAYAPPGGAGGGGAIREPPLMKIKLEQQHATELQHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00591760;
90% Identity: iTF_00602508;
80% Identity: iTF_00486629;