Dbia007494.1
Basic Information
- Insect
- Drosophila biarmipes
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018148935.1
- Location
- JAECYG010000101.1:10929157-10947530[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-09 5.2e-06 25.8 0.0 1 36 104 140 104 147 0.89 2 2 5.8e-19 1.1e-15 56.8 0.0 1 43 546 589 546 591 0.95
Sequence Information
- Coding Sequence
- ATGACATCGATGGACTCGATGGCCGCCCAGCTGGCGCAATTCTCACTGCTGGCCGACTTCAATCTGATCAACTCGCTGGCCAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAGTCCCGCACTCAAAGATACGCCCAGTCCCAGTGCCGATGCACCGCTCGATCTTAGCAGCAAGCCATCGCCGAACTCATCGATTAGCGGCGATGTGAAGTCCGTCAGAGCCTGTGTCACGCCCACGCCTTCGGGAAGAAGGGCGTACAGCGAGGAGGATCTGAACCGGGCGCTCCAGGACGTGGTGGCCAACAAGCTGGGCACCCGCAAGGCGGCCAGCCAGCACCATGTGCCGCGCTCCATTCTGGTCAACCGGCTGTTCAAGATGCAGCACGACCTGGACCAGGATGTGCAGGACGGCGACGAGCCGGAGGACTCCAACGACGATGGGGAGGCGGAGGTGGACAGCAATGCCTCGACCCCGGCGCCCTCTTATCCAGCGGACTTTGCCAGGTCGCAGCTGCGCAAGCTGAGCCACCTGTCCGAGCACAATGGCAGCGAACTGGGCGAGGATCTCGAGCGGGGATCGCCAAAGATGGGACGACATGCGGGTGGCAGCAGTGCCAGTGCTACTCCCGGGGCTCTGCCCTCCATCCCGCTGGATGCCAATGTCCTGCTGCACACACTCATGCTGGCCGCCGGCATTGGGGCCATGCCCAAGTTGGATGAAACGCAGACGGTGGGCGACCTGATCAAGGGTCTGCTGGTGGCCAACAGCGGCGGGATAATGAACGAGGGACTGCTCAATCTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTACCGACATCGCCTGCCCAAGTCGGAGACTCCGGAGACGAACTCCTCGCTGGATGCCAACGACGCCAGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCCCACTCCGCATCGCCCATGCTGGCCGCCGCCGTGGCCCAAGGCGGTGGCTATGCCGGCGGCAATAGTCTGCTGGCCTCCTCCTCGTCCAGCATTCAGAAGATGATGGCCAGCAACATCCAGCGGCAGATCAACGAGCAGAGTGGCCAGGATGGCCTGCGGAATGGCAATGCCAGCGACTGCAGCAGCAACAATGGCGGTGGCTCCTCCTCCTCGCTGGGCTACAAGAAGCCGAGCATTTCGGTGGCCAAGATCATTGGCGGCACGGACACCTCGCGCTTCGGCGCCTCGCCCAATCTCCTGTCCCAGGGCCACCATCAGGGTCACCACCTGAGCCACCACCAGCAGCAGCAGCAGCAGCAGCTGAGTGCCCAGGAGGCAGCTGCTCTAGCGGCGGGCAAGGGAACGCGGCCCAAGCGGGGCAAGTACCGGAACTACGATCGCGATAGCCTGGTGGAGGCGGTCAAGGCGGTGCAGCGGGGTGAGATGTCGGTCCACCGAGCGGGCAGCTACTACGGCGTACCCCACTCCACGCTGGAGTACAAGGTCAAGGAGCGTCACCTGATGCGACCCCGCAAAAGGGAGCCCAAGCCCCAGCCCGATCTGGTGGGTCTCACGGGACCCGCTAACAAACTGCAGCTAGACAAGCTCAAGGCGGGACCCCACGGGGGCTCCAAGCTGAGCAATGCCCTCAAGAACCAAAACAACCAGGCGGCAGCAGCGGCGGCGGCGGCAGCAGCAGCGGCGGCCGCTGCCACGCCCAACGGCCTCAAGTTGCCCCTCTTCGAGGCCGGTCCCCAGCAGCTGTCCTTCCAGCCGAACATGTTCTGGCCCCAGCCGAATGCCCCCAACGCCTACCGCCTGGACTTCAACCGCATCACGGAGGCGATGCGGAATCCCCAGGGCTCCGGTCAGCACGGCCTGATGAACAGTGCCCAGGAGATGGAGAACATGTACGACGGCATCATCCGGAAGACGCTGCAGTCCAGCGAGGGCAACGGCAGTGCGGCGGGCAATGGCAGCAGCAATGGCAATGGCCATGGACATGGTCATGGCCACGGTCATGCCCTGCTCGATCAGCTGCTGGTGAAGAAGACCCCTCTGCCGTTCACCAACCATCGGAACAATGACTACGTGGCCACCTGCTCGAGTGCCAGCGGCGAGAGTGTGAAGCGGTCGGGCAGTCCCATGGGCAACTATGCGGACATCAAGCGGGAACGGCTGAGCGCCGACAGCGGCGGGAGCAGCGATGAGGAGCACTCGCCCAGCCACAGCCACATCCTGCACGGCAGCAGCAGCAACAACAACAACAGCGATCTGGCGCACAACAAGAACAAGAGCGGAGGCGGTGGCGGTGGCGGTGGTCAGGCCAATGGGAATGGCAGGAGCAGCCGGATGACGTCGCGGGATGACTCGGAGACGGATGCCAGCAGCCTGAAGAGCGGCGAGAGTGGCGGCGGCCATCACAACCACAAAATCATGGATCTCAATGGGAGCAGCAGCAGTCACATCAAGTGCGAGGCGGAGGCGGTAAGCGGCGGGGGCCACCACAGTCCACAGTCCTCGCCCACCGCCGCCGCCAGAGCCTCCATCCTCCACGAGAAGCTGGCCCAGATCAAGGCCGAGCAGTTGGACGGGAACCAGGCGGAGCAGTTATAG
- Protein Sequence
- MTSMDSMAAQLAQFSLLADFNLINSLASXXXXXXXXXXXXXXXXXXXXXXXXXISPALKDTPSPSADAPLDLSSKPSPNSSISGDVKSVRACVTPTPSGRRAYSEEDLNRALQDVVANKLGTRKAASQHHVPRSILVNRLFKMQHDLDQDVQDGDEPEDSNDDGEAEVDSNASTPAPSYPADFARSQLRKLSHLSEHNGSELGEDLERGSPKMGRHAGGSSASATPGALPSIPLDANVLLHTLMLAAGIGAMPKLDETQTVGDLIKGLLVANSGGIMNEGLLNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRHRLPKSETPETNSSLDANDASEDPILKIPSFKVSGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHSASPMLAAAVAQGGGYAGGNSLLASSSSSIQKMMASNIQRQINEQSGQDGLRNGNASDCSSNNGGGSSSSLGYKKPSISVAKIIGGTDTSRFGASPNLLSQGHHQGHHLSHHQQQQQQQLSAQEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGPANKLQLDKLKAGPHGGSKLSNALKNQNNQAAAAAAAAAAAAAAATPNGLKLPLFEAGPQQLSFQPNMFWPQPNAPNAYRLDFNRITEAMRNPQGSGQHGLMNSAQEMENMYDGIIRKTLQSSEGNGSAAGNGSSNGNGHGHGHGHGHALLDQLLVKKTPLPFTNHRNNDYVATCSSASGESVKRSGSPMGNYADIKRERLSADSGGSSDEEHSPSHSHILHGSSSNNNNSDLAHNKNKSGGGGGGGGQANGNGRSSRMTSRDDSETDASSLKSGESGGGHHNHKIMDLNGSSSSHIKCEAEAVSGGGHHSPQSSPTAAARASILHEKLAQIKAEQLDGNQAEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00504608;
- 90% Identity
- -
- 80% Identity
- -