Dbia005948.1
Basic Information
- Insect
- Drosophila biarmipes
- Gene Symbol
- retn
- Assembly
- GCA_018148935.1
- Location
- JAECYG010000260.1:2187038-2198014[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8 1.2e+04 -3.5 0.0 44 64 122 141 113 151 0.61 2 2 1.1e-26 2.7e-23 81.9 0.0 2 89 314 399 313 399 0.96
Sequence Information
- Coding Sequence
- ATGCGTGGCGGACTTCTTGGCAAAGAGTCACGGCTGGCAGAGGTGGCTCTGGATGGGCCAGGAGCGGAGCTGGGGGATCCCCCCTTGGAGAACCCTCCAAGGCGGCCTGGAGGGCCCACGACTGATTGCCGTTTTTCACATGGTGATCGAACGGACGACGAGATGCGCGACTGCGACTCCGTGGATGGGGAGCACCATCAGCTGAGCGCCAAGGCGGCGATTGCAGCCCGCTTAAGTCACACAGTTTCCGGCGGAGGAGGGAACTTCGCCAGTCCCGAGCCCCAGACCGAGTTGCCCCTGAGCCATCACCATCAACTGCCGCCAAATCATCCGCTCAACGCTCTGGGCAGCTTCATGGGCATCGGCGGCCTCCACAGCATTCCAAATCTGCAGCACAGCGACGTGCTCGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTGGGACTGATGGAACAGGACTACGCGGCTGCAGCTCATGCGGCGGCTTTCGGGGCCAACATGCTGCCCACGACCATCAGCTCGGGATTCCCGCTGCCCCACAACTCGGTGGCTGCGGCGGCGGCGGCTGCCTCCTTTGGCCACGTGACCTCGGCGCCTAGTGGCGGCAGCGGGAACGGGGGCAGCTACAACGGGGGCACCACCACCACGCCCAGCTCCAATCCGGCGGCCACCAATGGAGGCGGCAGCAGTGGACCAGGCGGCACCGGAGGATCCGGCGGGGGCGGAGGAGGAGGAGCAGGTGGCCACCAGTTCTCGTTTGCATCCCCCACAGCAGCGCCGAGCGGCAAAGAAGCCCGCCACTTTGCAGCCAATTCCGCATCCAACTCGTCGACGTCCAGCGAGGCCTCCAATTCATCGCAGCAGAATAATGGATGGAGCTTTGAAGAGCAGTTCAAACAAGTCAGACAGCTCTACGAAATCAACGATGACCCCAAACGCAAAGAGTTCCTGGACGATTTGTTCTCGTTTATGCAAAAGCGCGGTACCCCGATCAATCGGCTGCCGATCATGGCCAAATCGGTGCTGGATCTGTACGAGCTGTACAACCTGGTGATTGCCCGCGGCGGCCTGGTGGACGTTATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCCTTCACCCTGCGCACCCAATACATGAAGTATCTGTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACGCCGGCGGAGCTGCAGGCGGCCATCGACGGGAATCGCCGGGAAGGAAGACGCTCCAGCTACGGGCAGTACGAGGCCATGCACAGCCAGATGCCGATGACGCCCATTTCGCGACCCACTCTGCCGGGTGGCATGCAGCAAATGTCGCCCCTGGCCCTGGTCACCCATGCCGCCCCCACCATCGCCTGA
- Protein Sequence
- MRGGLLGKESRLAEVALDGPGAELGDPPLENPPRRPGGPTTDCRFSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVSGGGGNFASPEPQTELPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSGFPLPHNSVAAAAAAASFGHVTSAPSGGSGNGGSYNGGTTTTPSSNPAATNGGGSSGPGGTGGSGGGGGGGAGGHQFSFASPTAAPSGKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHSQMPMTPISRPTLPGGMQQMSPLALVTHAAPTIA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -