Basic Information

Insect: Drosophila basisetae
Gene Symbol: -
Assembly: GCA_035041595.1
Location: JAWNLB010000162.1:3221360-3224963[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1.8e-05 0.0011 19.1 0.9 1 23 276 299 276 299 0.97

2 8 1.9e-05 0.0012 19.0 4.4 2 23 311 332 310 332 0.95

3 8 0.0024 0.15 12.5 0.8 1 23 341 364 341 364 0.94

4 8 0.12 7.3 7.1 0.1 3 23 374 394 372 394 0.96

5 8 0.00016 0.0098 16.2 6.9 1 23 400 422 400 422 0.98

6 8 0.00022 0.013 15.7 0.1 1 23 427 449 427 449 0.98

7 8 2e-06 0.00012 22.2 1.7 1 23 455 477 455 477 0.97

8 8 0.022 1.4 9.4 4.7 1 23 483 506 483 506 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1.8e-05	0.0011	19.1	0.9	1	23	276	299	276	299	0.97
2	8	1.9e-05	0.0012	19.0	4.4	2	23	311	332	310	332	0.95
3	8	0.0024	0.15	12.5	0.8	1	23	341	364	341	364	0.94
4	8	0.12	7.3	7.1	0.1	3	23	374	394	372	394	0.96
5	8	0.00016	0.0098	16.2	6.9	1	23	400	422	400	422	0.98
6	8	0.00022	0.013	15.7	0.1	1	23	427	449	427	449	0.98
7	8	2e-06	0.00012	22.2	1.7	1	23	455	477	455	477	0.97
8	8	0.022	1.4	9.4	4.7	1	23	483	506	483	506	0.97

Sequence Information

Coding Sequence: atgctgCCGCACTCACATAATTTGCCACAAACTGCAATGGCTGCGCCAATTGAGAATGAGAACGAGGATGAATGCGCCAGCGATTGGCATCTTTGGTGTCGCCTCTGCGCCAAGGATGATCTTCAGGGCAACATCAATGTGTTCTTGAAAAACGAACACTCAACGCCAGGCGGCGAGCGGGATGGCGATGCCCAGGAAGTTGTAGCAAGTGCACCAATTGCCGACATGGCTCTGGCCACAGCCATTGGCAAATATTTCTGGGTGAATATAACACGCGGCGAGGAGCTGCCCGAGATGATATGCAGCGAATGCCTAACTCTCGTCACCTCGCTGGTTAACTTCTCGGAGCGAATAACGCGGGTGCAGAAACTCTATTGCATATTGCAAAGCACACCCAAGCAGGATGCGATTAGCGTGCAGGAGTTGCGCGGCAGATTTGGGCTGATCgaagaggagcagcagctgccggtGCAGCCAGAGCCCGAGACGCTTACCGAGGTACATTATGTGGAGGAGAAGCCCAAGCTGAATGAATTGGACGAGACGGTGTTGGAGCTGGAAAATCCGCTCACGCCGGCTGGCAAAATCGAAGAGAAGCCTACAACTGAAACGGTGACAGCTGAAGCAGAAGTTGAGGAGCAACAAGAGctggaggatgaggaggaggaggaggcacaagaagaagcagcagatgAGCAGCTGGAATACGAAGATGCGGGcactgagctgctgctgaatcTATGCGATGCATACAGCAACGCTGACAGCGATGAGGACAGCAACTCCTCCAGCCCGAAGCCCAAATCCAAGGAGCGCCGCAAAGCGCATCAGTGCAACGAGTGTCCGCGTGCCTATGCTTTGCCCCAGACGCTGCAGCGGCACATGCGTCAGTACCATGACAAGAAGAGCACAGCGGACATTAAGCTGCTGTGCTGCGAGCAGTGCGAGAAACAGTTTCGCTCCCGCTACCAGCTGCAGCGGCACATGCAACAGCATCTGCCCATGCCCAAGCGGAAGATGTATCCCTGCACCAGTTGCAGCAAGAAGTTCACAACGAATGCCTCAGCGCAGTCGCATGCCCAGTATATGCACCAGGAGGAGCGACCGCGTCCGGTCATCTGTGAGCAGTGCGGCGTCGGGGTGCATTCGCTGAATGCGCTCAAGGAGCACCTGTTGAGCCACACGGATTATGCGCCGTACGAGTGCGATGTGTGCAAGAAGTGCTTCAAGAGCTTGAGCCGTCTCAAGCATCACAAGGAGACGCACGATCCGCACAAGTACATCTGTCCCGAGTGCGGCATGCAACTGAACTCGCGACCCACTCTAAATCGCCATCGGCTGGTGCACACGGATCAGATGCAGCACAAGTGCGACTATTGCGGCAGGGAATTCAAGCGGGCGAAAGCCCTCAAGAACCATCTCATCCTGCACACCGGACTGAAGCCGTACTCCTGCGACTTTTGTGATCGCACCTTTGCCAACGGCTCCAATTGTCGCACGCACAAAAAGAAATCGCATCCCGAGGAGCTAGCCGCCCAGGAAGCAGCCGGTGGCGCCAAAACCTACAATCGCAATATACCCAAACTGGAGGCGCTAAAAGCATTCACAAAGAACAAGGACAACTTGTCGCCGGTGGCCACCAAGCAGAGTGGCTGCTTCGCCTTTGGCAAGAAGCCCAAAGCGCCAATCAAATCCGATGCCAGCAGCTCGTTGCAATCGTCGTCGGTGcccagcgcagcagcagcagttggcatTATTCCCACTATCGACAATATCTACAATCACATTATGAAGCCGCCGTtggcagcacagcagcagctgcttgccaCCGATGGCAGTGCAACAATGCTCGCAACCCGACAGCCGGAGGAGCAGGCGGAAACTGCGATTGCTCCACAGATCTTTTCGTACTAA
Protein Sequence: MLPHSHNLPQTAMAAPIENENEDECASDWHLWCRLCAKDDLQGNINVFLKNEHSTPGGERDGDAQEVVASAPIADMALATAIGKYFWVNITRGEELPEMICSECLTLVTSLVNFSERITRVQKLYCILQSTPKQDAISVQELRGRFGLIEEEQQLPVQPEPETLTEVHYVEEKPKLNELDETVLELENPLTPAGKIEEKPTTETVTAEAEVEEQQELEDEEEEEAQEEAADEQLEYEDAGTELLLNLCDAYSNADSDEDSNSSSPKPKSKERRKAHQCNECPRAYALPQTLQRHMRQYHDKKSTADIKLLCCEQCEKQFRSRYQLQRHMQQHLPMPKRKMYPCTSCSKKFTTNASAQSHAQYMHQEERPRPVICEQCGVGVHSLNALKEHLLSHTDYAPYECDVCKKCFKSLSRLKHHKETHDPHKYICPECGMQLNSRPTLNRHRLVHTDQMQHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGGAKTYNRNIPKLEALKAFTKNKDNLSPVATKQSGCFAFGKKPKAPIKSDASSSLQSSSVPSAAAAVGIIPTIDNIYNHIMKPPLAAQQQLLATDGSATMLATRQPEEQAETAIAPQIFSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01322847;
90% Identity: iTF_00542636;
80% Identity: -