Basic Information

Insect: Drosophila bakoue
Gene Symbol: -
Assembly: GCA_008044335.1
Location: VNJL01012602.1:12944-14788[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.6 2e+02 3.4 2.1 3 23 263 282 261 282 0.79

2 7 0.0035 0.42 11.8 1.4 1 23 290 312 290 312 0.97

3 7 0.00068 0.082 14.0 1.3 1 23 318 341 318 341 0.96

4 7 2.2e-06 0.00026 21.9 1.3 1 23 346 369 346 369 0.91

5 7 2.8e-05 0.0034 18.4 1.9 1 23 375 398 375 398 0.97

6 7 0.018 2.2 9.5 3.4 2 23 406 428 405 428 0.94

7 7 0.013 1.6 10.0 0.7 1 21 434 454 434 455 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.6	2e+02	3.4	2.1	3	23	263	282	261	282	0.79
2	7	0.0035	0.42	11.8	1.4	1	23	290	312	290	312	0.97
3	7	0.00068	0.082	14.0	1.3	1	23	318	341	318	341	0.96
4	7	2.2e-06	0.00026	21.9	1.3	1	23	346	369	346	369	0.91
5	7	2.8e-05	0.0034	18.4	1.9	1	23	375	398	375	398	0.97
6	7	0.018	2.2	9.5	3.4	2	23	406	428	405	428	0.94
7	7	0.013	1.6	10.0	0.7	1	21	434	454	434	455	0.94

Sequence Information

Coding Sequence: ATGAACGTGGACATGTCCGAGATAATTGAGTTCGACATGGGCGTCAAGGGCGAGTATtcggacgacgacgaggacagCCACGGCGGCGTAGGATCCGCTGACGGTGGAGGCAACGCCATGGTGGACGTTGTGAGCGGCGACGACTCCACCTACGTGGTGCTGGAAGGCCTGGGCAATGAGTACGACGAGGAGTTCCTTATTGTCAACGAGGACGCCACCACCGAGGGCGAGCTAATGCTGGGCGATtgccagctgcagcagcatgtGGACAATGGCGTGCTCATTGCGTCGCGTGTAAAGTCGCTGCCGGTGGACGAGGAGGGCGACCACTATGTGATCACCGAGCTCCGTCTGTCCGAGATGGGCGagctggtggaggaggaggaggaggatcaaAAGCAGAAGTTCGATGCCGGCGAATATGCCTACATATTTCCGCCCAAACAAGAACAGTCCGATGATCTGGATATGAAACCGGTGATGTCACCGTCCCTGCCACCATCTCcatcgccaccgccgccggctcCGCCGCAGACACCCAGCGTAAAGATGAAGGCCACCTCCGCGCCACAGTTCGTCGTGCGGAGCTATAGCAACCAGAACGATGACGGTGAAATCGTGGACGTGAAGCCCACTGATAAGATGCTGGAGGAGTTCAAGGGACCGCGCCGCTACATGCTCTTCGACGATCTGATAGCCACCATTGTGGACTTCGACGATGACAACACGCCAATCGTGGAGTTCTCCATGGTCAACAGCCAGATAGATGAGAAGCTGCCGGTGGAGTGCGGCATCTGTCCCGATGTTATGCACAAGTCGAAGCTGTCCAGACACCATAAGACGCATCTGGTGCCTGGAACGAACCGGTACGCGTGTGTTTACTGCTCGGAGACGTATCGCGACTGCAAGTACCTGGCCGGGCACGCACGCCGTCACATGGGCATCCGTCCCTACGTGTGCGAACTGTGTACGCTGTACTTCTCCACCAAGCAGGATCTGCGCGTGCACAACCAGCGTCGTCATCTTGAGAAGGAGCACATCTGCGAGATGTGCGGCAAGACGTTTGCCCAGAACACACAGCTGAAGCGCCACCGGGAGGCGACGCACGAAAAGAAGCGGCGCTTCCAGTGCCAGTACTGCCAGAAGGCCTACTACAAGAACTTCTCGCTGCAGGAGCACATCCGGAACGTGCACATGGGCAAGCGGCGCATGCTCAAGTGCCCCTTCTGCGGTATGCAGTGCCGCGACGCCCACAAGATGGCTCGCCACCGCAAGGATATGCATCTCAGCCAGGGCCTGTACGAGTGCCACCTGTGTCAGGAGGAGTTCACCGACATCAATTATTTTGATGCGCACAAGCGCTCCATTCAGTGCCGCAGCAACACACGCCGCTATGTCGGCAGCTCCGGCAATGATCAGCCGGATGGCAGCGGCTCGACCTCGGGTTCCATTTCCGGCGGCCTGTTTGATGGCGGCGACGATGACGAGGGTATGGGCATTCTGGAGGAGGAGTATGACGAGGACGCCGGCCTGCTGGTAGAGGAGGGCGATGCGGAGGCCGTTGTTGCCAATGGGGGGCACTACCTGAACGTGTCCGAGGAGGacgagcagcaacagcagtacGTCCAGATATCGAACTTAAATGGCCAGCAACTGCTGGTCGAgcaggatgaggacgaggaggagaacgAAGATGTCGATCCGACTGCGGCGGACGTTGGGGAGCAGTATTTTAACACTGACCCCCACCAGTaccagccacagcagcagatCTTTCACCATGTCGGCGATGAATTTAACGACGAGCTGATATATGAAATCACCTTGAAGACTGAGGATAATTGA
Protein Sequence: MNVDMSEIIEFDMGVKGEYSDDDEDSHGGVGSADGGGNAMVDVVSGDDSTYVVLEGLGNEYDEEFLIVNEDATTEGELMLGDCQLQQHVDNGVLIASRVKSLPVDEEGDHYVITELRLSEMGELVEEEEEDQKQKFDAGEYAYIFPPKQEQSDDLDMKPVMSPSLPPSPSPPPPAPPQTPSVKMKATSAPQFVVRSYSNQNDDGEIVDVKPTDKMLEEFKGPRRYMLFDDLIATIVDFDDDNTPIVEFSMVNSQIDEKLPVECGICPDVMHKSKLSRHHKTHLVPGTNRYACVYCSETYRDCKYLAGHARRHMGIRPYVCELCTLYFSTKQDLRVHNQRRHLEKEHICEMCGKTFAQNTQLKRHREATHEKKRRFQCQYCQKAYYKNFSLQEHIRNVHMGKRRMLKCPFCGMQCRDAHKMARHRKDMHLSQGLYECHLCQEEFTDINYFDAHKRSIQCRSNTRRYVGSSGNDQPDGSGSTSGSISGGLFDGGDDDEGMGILEEEYDEDAGLLVEEGDAEAVVANGGHYLNVSEEDEQQQQYVQISNLNGQQLLVEQDEDEEENEDVDPTAADVGEQYFNTDPHQYQPQQQIFHHVGDEFNDELIYEITLKTEDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00594093;
90% Identity: iTF_00524666;
80% Identity: -