Basic Information

Insect: Drosophila bakoue
Gene Symbol: -
Assembly: GCA_008044335.1
Location: VNJL01001698.1:5408-9508[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0046 0.56 11.4 0.7 3 23 249 270 247 270 0.95

2 10 0.012 1.4 10.1 4.6 2 23 393 415 393 415 0.91

3 10 0.0094 1.1 10.4 2.3 3 23 496 517 494 517 0.94

4 10 0.11 13 7.1 3.5 1 19 622 640 622 645 0.94

5 10 0.00019 0.022 15.8 0.2 2 23 757 779 756 779 0.96

6 10 0.0011 0.13 13.4 0.2 2 23 825 847 824 847 0.92

7 10 0.0091 1.1 10.5 3.6 2 23 902 924 901 924 0.96

8 10 0.089 11 7.4 4.2 2 23 938 960 937 960 0.92

9 10 0.0018 0.22 12.7 0.7 2 23 1030 1052 1030 1052 0.95

10 10 0.041 4.9 8.4 0.6 1 23 1150 1172 1150 1172 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0046	0.56	11.4	0.7	3	23	249	270	247	270	0.95
2	10	0.012	1.4	10.1	4.6	2	23	393	415	393	415	0.91
3	10	0.0094	1.1	10.4	2.3	3	23	496	517	494	517	0.94
4	10	0.11	13	7.1	3.5	1	19	622	640	622	645	0.94
5	10	0.00019	0.022	15.8	0.2	2	23	757	779	756	779	0.96
6	10	0.0011	0.13	13.4	0.2	2	23	825	847	824	847	0.92
7	10	0.0091	1.1	10.5	3.6	2	23	902	924	901	924	0.96
8	10	0.089	11	7.4	4.2	2	23	938	960	937	960	0.92
9	10	0.0018	0.22	12.7	0.7	2	23	1030	1052	1030	1052	0.95
10	10	0.041	4.9	8.4	0.6	1	23	1150	1172	1150	1172	0.99

Sequence Information

Coding Sequence: ATGGCTGCATCCATATATGCCACCCCACCGCCAGATCTGAGCAGCGAGGACACTGCTCTCTCCGACGTCTCCAACTCATCGACACTGAACACGAaccgcaacagcaacaacacacaTGAAGCCACAGGAGCAGCATCCCgagaaacaacagcagcagcaggagcagccagagggggaggaggagccggagcagaGGCAGGAGCAAGCGCAGGAGTGGGAGCCATTTCACCCGTCGAGCACTTGGTCAAGCCAatggagctggaactggagccACAGCCAGCGGGAAGCGGCACAACTGAGCcggagccagagccggagGAAGGGCACAAGGATAGGGAGGAAGCAGAGGAAGAAGTGGAGGAGGACGATGCTCACATGGCCACCATGGCGGCAGCcatgcagctgcaactgctggAGGCTCTGAGCGATGCGGCCAAAAAGCGACGTAAACAGCACAACCCCAGTCGCCTGGAGGCGCTCAATCTCAGCGGCGAAGGTGCGGGTCAGAAGCGAGGTGACTCGACCGTGGACTACGAGGATAAGCTGTCCAAGATGTTCCTGCCCAAGTCCATTGAGCAGCTGAAGGAGACCTtcgagctgctgcagcagcacaagCAGGACGAAGAGCAACCCGAACCTGAACCGGAAGCCGAACCCGAACCCCAAGCCGAGCCAGAAGCGGAAGCCAGGGAAGACATATCAGAGCGAGCGGGCAAGGAGCGGGAGAATCCCTACCACACATTCTGCAAGCAGTGCGGCGAGAATTTCGAGACCGAGTTCAAGCTGAGCCTGCACATGCTGCAGGACCATGGCGAGGATCGGGTAGGCGACCAGGACCCCGCCGACTTCCTGGCCTCCATCAAGGTGAAGCTTGAGAGGGCCGAGAGCCCTAGTCCGCAGCAGGAACACCCAATGCACatgcatcagcagcagcacgacCTGACCAACGGTCACAGCAAGGACTTGGAGCGCGAGCAGGAGCACTGGTTTCAGGCCATGcagcaggcccaggcccaTCATCCGCATGCTGCCCAAATGCCGCCGGCGTTTCCCTTTCCCCCGGAGGCCGCACTGGGAGTGGGTCCTGCTGGTTACCTGCCCCTGCTGGGAATGTCCGGGTTTCCGGGAGTCGATGGCCTCAACCGACCGCCATTGCGGATCTTTAACCCCGAGGCCTATTGCGAGCTGTGCAACAAGGAGTTCTGCAACAAGTACTTCCTTAAGACGCACAAGGCCAACAAGCATGGAATCTTTGATCCCGTCGGCGAGCCCAACACCACCAATGCTTCCAgccaccacaacaacaacaacaacaataacaacaccaccagcagtaacaacaacaacagtggtCACACCACCAATCCAGGCATGAGCTCCATGAGTCAGATGTTCCAGCTGCAGCGAGAGGCAGCTCAGGCGGTCAAGCAGGAACAGATATCAGCCAGCGGAGGAGCCTCCGCCCCTCCCGTGGCCACCGTGCACTGTGACGTCTGTTCCAAACGCTTCACCAATGTCTTCGCCATGCGTCGCCACAGGGCCAAGCAGCACGACTCACTGCCCTCCGCTCAGGATTCGCCCAATTCCCAGACCCAGACGCCGACGCAGTCACAGTCGCAATCCCTGCGTGGCAGTCCCAACGAGCCACCGCAGCAGATCATAAAGCAGGAAATGCAGCAGGAGGCGGAGCAGCTCAAGCCATACCAGTTGACCGAGGGCTTCCGCGAGGACTTCACcttggagcaggaggagctgagCTTCGTGCCGCCGCCCCGGAAGCTGCCGTCGCACCTACAACAGCAGGCCAAGGAGGCCAACTTTACTCCGGACAAGCTGCGTCGCTTGGGCGTCCAGTTCCCTGAATTCTACTGCGAACTGTGCCACCGTGAGTACGCCAATAGGTACTTCCTGCGCACCCACAAGTGGAAGCGACACGGCCTGTTCGTGCCACCGGAGGACGTGACACCGCAGCAAGCCGGCAAGGAGGAGGCCCAGATGAGCGCCTGGCCCTTCATGCCGCTCAACCTGATGCTTGCCAAAGCGGCAGCAGCCTCCTTGGATCAGCAGGAGTTGGACCAGGACCTAACGGAGGCGGAAGCCGACGCTGAACAGCCCAGCAAGCGGATCAAGCTGGAACAGCAGGAGTCATCGCCGCCGGAGGTATACGACGAAGAGAAGTTGAATGGGTCGGTGGTGGGACTGCAGAATCTCCAGAAGCTCCAGTCCATGCTGCAGCAGCTAAACGACATCAATGGTAAGCGTCCCCTGCCGTGTCACCTCTGCGGCAGGGAGCTGGAGAACCAGTATGCGCTCAGAGCTCACTTGATGACCGAACACGCGGGCCAGATGCAGCTGCCCatgcccattcccattccgcTGCCCGATCAGCAGGCGTCCCATCCCATGGCGGGCTTGTATCATCCCCAAACTCCGCCGGGTCCAGGGGCTAGGTCCTCCCCCATCGGAGACCTTCGCTGCCAGCAGTGCGATCGGGATTTCGCCACTGCCCAGGAATTCAAGCAACATATCGCCGAGGTGCACATGGGCGGCCGGAGTGGCGGACTCGGTGGTAGTCCCCTGCGTGAAGGCTTCTTTACCCCGGAACGGCCGGGGCCTCCTCCTGCTGGAGGCCCAGGAGGATCTGCCCCAGCTGGAGCTCCACCGGGCAATCGTCCGGCCTACACCATCACCCCGACCAGTAGCTACTGCGAGATCTGCAACAAGGAGCTGTGCAACAAGTACTTCATGAAGACGCACATGCAGCGGATGCACGGCATCGAGATCGAGAACGGAGCCCAGATCGGCGGCGTGGTGTGCAACATATGCAACAAGGAGCTCTGCAGCAAGTACTTCCTGCGGGTGCATAAGCACAACACGCACGGTATTATCGAGGAGGGCTCCCCGCTGCCGCAACCGCGGGGTCAGAACGGCGTCAAGATGGAGGCagccgcagcggcagcggctgctgccgcAACGCAGTCCCAATCGCAGCCAGCGGCAGCTCAGCCGCAGGATCAGGAGATGAATGTTTCGCCGCCCACATTGGAGGGcagttccagctccagttcgTCCGGCACAAGTCACGAGGTGTGTCCGCTGTGCTCGCGACAGTTCCGCAGCTTCAAGTGGCTGCGCTCTCATCTGATGAACGAGCACGGTTCTGCGGGAGTGGAACGCCTCCGGGAGATGGAGCCCACCCAGTCCTCGGGACGCAGCAAGCCCAACAGTCCCACGCTCAAGATACCCAACGGCAGTGGCAACGGCAACCCAACTCCggcgggagcgggagctggaAGTGCCGCTCCCAATCTCGCCCAGGCACTGCAGAACCTCAATGCCCAGCACCTCTTCGGCCagatgcaacagcagcagcaacagcagatgCCCAAGATGCCgcctctgccgctgccagGGATGTTCGGAGAGCAGGCGGCCAGATTCAAGGAGTACCAGTGCTCACTGTGTCCCTTCACCACGCCCTACTACGCCTTCCTCTTCATCCATGAGCGCTCCCATGCTCTGCTCAACAACGGAGGCGACGGCATGGAACTTCCCATGGAGACACCGCCACCGCAGCCGGCAAGGAACCCTGGAAAGTCGCGCAGCAAGTCCAGCAAGACGGCAGCAGTAGTGGCACCGCCAGAGCCCACTGAACTGCCTGTGGAGCCCACCAACCTCAGCACCTCAACTGTTAAGATCTCGCCATCAGCCGGATCCCCGGCCAACTCCTCCCCCAAGGCAATCAGCTCAACAGCTTCTCCCAAGATTCAACGCCGTCGATCCTCCTCGAAGCCGCCGACCACGCCCAACGGCCTGGTCAGTGGCAACAATGGAATCGgagccggaaacggaaatggtgGTCACCGCTCGGCAGCCACCTCGCCCTTCGAGGGCTGCGGGGAACTGGCCAATGGTAGCGGCAAGCCGGCGAGCTACGCACAACCGGATCGGGCCGAGGAAGCATATCAGATGCAGGCCTTCCACCTGCAGCCCGCCGACGCCGACTCGGAGATGCAGTTTGCACCGGCCCTGGTCTACCTGCCGGTGCGTGTGCGGGCCTCAGAGTCGGCCACGCTCAGCTTCAGGCTCACACCGGCCTAA
Protein Sequence: MAASIYATPPPDLSSEDTALSDVSNSSTLNTNRNSNNTHEATGAASRETTAAAGAARGGGGAGAEAGASAGVGAISPVEHLVKPMELELEPQPAGSGTTEPEPEPEEGHKDREEAEEEVEEDDAHMATMAAAMQLQLLEALSDAAKKRRKQHNPSRLEALNLSGEGAGQKRGDSTVDYEDKLSKMFLPKSIEQLKETFELLQQHKQDEEQPEPEPEAEPEPQAEPEAEAREDISERAGKERENPYHTFCKQCGENFETEFKLSLHMLQDHGEDRVGDQDPADFLASIKVKLERAESPSPQQEHPMHMHQQQHDLTNGHSKDLEREQEHWFQAMQQAQAHHPHAAQMPPAFPFPPEAALGVGPAGYLPLLGMSGFPGVDGLNRPPLRIFNPEAYCELCNKEFCNKYFLKTHKANKHGIFDPVGEPNTTNASSHHNNNNNNNNTTSSNNNNSGHTTNPGMSSMSQMFQLQREAAQAVKQEQISASGGASAPPVATVHCDVCSKRFTNVFAMRRHRAKQHDSLPSAQDSPNSQTQTPTQSQSQSLRGSPNEPPQQIIKQEMQQEAEQLKPYQLTEGFREDFTLEQEELSFVPPPRKLPSHLQQQAKEANFTPDKLRRLGVQFPEFYCELCHREYANRYFLRTHKWKRHGLFVPPEDVTPQQAGKEEAQMSAWPFMPLNLMLAKAAAASLDQQELDQDLTEAEADAEQPSKRIKLEQQESSPPEVYDEEKLNGSVVGLQNLQKLQSMLQQLNDINGKRPLPCHLCGRELENQYALRAHLMTEHAGQMQLPMPIPIPLPDQQASHPMAGLYHPQTPPGPGARSSPIGDLRCQQCDRDFATAQEFKQHIAEVHMGGRSGGLGGSPLREGFFTPERPGPPPAGGPGGSAPAGAPPGNRPAYTITPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCNICNKELCSKYFLRVHKHNTHGIIEEGSPLPQPRGQNGVKMEAAAAAAAAAATQSQSQPAAAQPQDQEMNVSPPTLEGSSSSSSSGTSHEVCPLCSRQFRSFKWLRSHLMNEHGSAGVERLREMEPTQSSGRSKPNSPTLKIPNGSGNGNPTPAGAGAGSAAPNLAQALQNLNAQHLFGQMQQQQQQQMPKMPPLPLPGMFGEQAARFKEYQCSLCPFTTPYYAFLFIHERSHALLNNGGDGMELPMETPPPQPARNPGKSRSKSSKTAAVVAPPEPTELPVEPTNLSTSTVKISPSAGSPANSSPKAISSTASPKIQRRRSSSKPPTTPNGLVSGNNGIGAGNGNGGHRSAATSPFEGCGELANGSGKPASYAQPDRAEEAYQMQAFHLQPADADSEMQFAPALVYLPVRVRASESATLSFRLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00594085;
90% Identity: iTF_00533328;
80% Identity: -