Dbak013320.1
Basic Information
- Insect
- Drosophila bakoue
- Gene Symbol
- -
- Assembly
- GCA_008044335.1
- Location
- VNJL01010444.1:9770-16500[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0018 0.21 12.7 0.9 1 23 1237 1260 1237 1260 0.97 2 13 6.6 8e+02 1.5 0.2 1 23 1412 1434 1412 1434 0.91 3 13 0.00015 0.018 16.1 2.7 2 23 1437 1458 1437 1458 0.97 4 13 5.7e-05 0.0069 17.4 0.2 3 23 1466 1486 1464 1486 0.98 5 13 4.8e-07 5.7e-05 24.0 4.1 2 23 1493 1514 1492 1514 0.97 6 13 4.5 5.4e+02 2.0 0.4 5 23 1527 1545 1525 1545 0.96 7 13 1.1 1.3e+02 3.9 5.4 3 23 1552 1573 1550 1573 0.93 8 13 0.12 14 7.0 0.2 2 23 1584 1604 1583 1604 0.96 9 13 4.6e-05 0.0055 17.7 0.4 1 19 1610 1628 1610 1632 0.95 10 13 2.9e-05 0.0035 18.3 0.4 1 23 1640 1662 1640 1662 0.98 11 13 8.5e-05 0.01 16.9 7.6 1 23 1668 1690 1668 1691 0.96 12 13 0.00018 0.022 15.8 6.5 1 23 1696 1718 1696 1718 0.98 13 13 0.0022 0.26 12.4 6.1 1 23 1724 1746 1724 1747 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAACAGCGTTCAGTGCCCCGTGTGCACCCTGTACCTGCATGCGGGAATGAATCTTTCCGATCACCTGGAGACTCATCCCAAGGAGCAGGTGATCAAGGCGCTGGTCCAGATGACGATTGTCGGAAGCGGTGGCATGGGCAGTGCCCTGGCGGCCGCTATGATGTCGGGAGGCTCTGGAGCTGGAGGCGGAGGTGCGTCTGATGGCGGAGAAGCCAGCATGGCAGATAATAAGACCGCGTTCACATTGTCGTCTCCATGTGGCGATGTCAAACCAGTTGTGGCCAGCACCCCGCCAGCGATGTCCAAAACCATATCAGCTGCAATGCCCGCAGTGCCGCCAGCtccgccgttgccgccgctTTCATCCGCCAACGCCACACCCCCTTGCACATCCCCCTCtgcaagcagcagcaccagcagcagcagcagcaacagcaatctGAGCAATCCACCGATGAAAGCACTGAAATGCGCACCGCCCACGACTGAGGCGCGAGCCAACACATCCGCACATCCCACCACAAGCAGCGTGTCCACACTGTACCAGTCGTCGCTGGTCGCTCCGGATTATCGCTTcaatcaccagcagcagcagcagtcgggcTTTGGGCGTGGTGTTGCTGGCACCAACGCAGCCACGCTGGTAATACCGCAGGTTGCGCAGCAGCACTTCCTCACCagccatcagcagcaggcccaCTTCacccatcagcagcagcaacagcaacagcagcagcagtcgtcCCTCAAGTTTACCTACACCACCGctttgccgccgccaccgccgctgcaGACACAGGCAGCGACGATCCACAGCTTGgggcagcatcagcagaatCATCAGAGTCACCCACAGCCCCATGCCCATCCGCATTCGCAACAGCagacccaccaccaccaccaccagcagttGGGTCCGTCTCCCGCCTCAagattgcagcagcagcagcagcagtcgctgAGCTTGCAGACCTACGGGCCGGGtgtgagcagcagctgcagttccAGCTCCGCTTCCAGCTCGAGTTGTGCCGCTGGCAGTCGGGGCACTCGGCAAACCAACTCACCCTTTGGGGCACTGCTCAacgcggcggcggctgtggcCTGCAACACGCCAGCCTCGACCAGCGCCTGCTCGTCGGTCCTGCGCTTTGCGGAATCACCGGTGGCCCACTATCTGGAGCGGGATAATGGCGACTTCATTGTCCAGGAGACGCCCAAGCACATTGTGGAGTGTGTGGAGAAGGAGGACGGTGAGTTCTCTGTGATCGAGCGCATTTACCAATCCCCGCCGAGTGTCTTGCACATACACGACGACGATGAAGACGACGAAGAGgacgaggaagaggaggaagaggacgaCAACGACCACGAAGCCCagcccgaggaggaggtggacggGGACGATGAGCGGGAGGAGAAcagccgcagtcgcagtcgcagccgcagccggaATATGAACAAGACAACGAAGAAATCGCGGAAGGCCAAGCCCAAGCGAAGCTCCAAGCGCGTCTtggacgaggatgaggaaTTCATGAGCATCAGCAGTGGCTGCGAGAGTGAGTCGGAAGCAGAGCGCAAGCCCGAGTCGACGTCAAGCGTTCCACCTCCGCTCTGCACGGGTCCCTCCACGAgctctgcagctgctgcagccgccgccgcagccggaACTTCCAGCAATCTGGCGGACACTCATTCCAATTCGGCCTCCAACTCCGCCTCGAACTCCACCTCCACCACGACCAAATCCAAGAAGAATCGGATCACGGTGCTCAGCGATGTGCCGCTCAATATGAACGAGTACCTCGATCTAATGGGCAACATCGTGGCCTCCAGTCGCATTGGGGCGGGACGCCCCTTTGCCGCTGTGGTTCCCATTCCCCTCGTCAaggtggagaaggaggagcccATGGACGAGTACGACGACAGCGAGGCAGCGCAGCAGTTGGAGCAGAAGCCCAGCTTGGAGCACCACGGCACCACAAGCGTCATTCGCATGGCCAGCACAGTGGCGGCCACGACAACGACGCCGGTGACTGAGGAGGCGTCCGCCGAGGATCTCAACGAGCCGCCGCTCATGAAGGTCGAGGTGGAACCCAACACGATGTTGCTGCCGCAGCGCTTCTCCACTCCCGCCCAGAGTCGCGGGCCCAAGAAATTAGTCATCAAACcaaaggcaacagcaacggcatcAGCGACGgcatcagcaccagcaacGGCGACGACAACAAAAAAGACTGACACCTCTCCATCTTCCAgctccagcaacaacaacaacaacaacaacaacacatcCATATCAAAAGATTTGGGACAGGTGCAGGTAAAGAGCGAGACTCTGGAGGCTCCGGcggcaaacagcagcagcagcattctGGAGAAGCACCTGACCACCAACCGCAGCCAGATGCAGCCACACCATTCGGCAGTCAACGATGATGATGCCCGGGTGCTGCTGGAGTTTGCCAACTCCAAGCAACCGCCACCGCTGGCCGCGTCCAGTACCACGTTCGTGGTGAATGCCAGCACGGGATTCCCATCGGCAGGGTCCGTtttcgccagcagcagcagcagctctaaGCCGGCCTCGAAGCCCGGCGAGGAATACATTCTGCCGGACAACACCAACCTGGAGGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACGCCTCCTCGGCGGCCCAGGTGCAGGCAGCTCTGCAGCCGCCGGACTTCAACTTCCTTTACCACCAGACCACCACCAGCACGGCCACCGCGGCTACCTATCCCTTCAACGCCTTCTCgaggcagcaccagcacctgcaccagcagcagctgcagcagcagcaacacggAGTAAGCGACGCCACCAATGCGGCCACtttggcctcctcctccagcaaTTCCATGGACCACGACTCGATGAACGCCTCCTTCCGCGTGGCCAAGACACAGTCGCTGCAGTGgtaccagcagcaggagcaggagaacgATCCACAGATCCAGGCAGAGGGGGCGGGGGCCTCGGGGGTGTCCTCCAACCATAGCCACACGGATGTGGTGGTCAGCCACCAGCCCACCAACTTCAATGCCGCCCTGGCGGCCGTCGATTGCTGCAGCGCTGCAGCAACGCTGGACGAGGAGGCCAAGTATCTGGACCTGGACACGTGCAAGCGGGAACagctgagcagcagcagcaacctgcCCTCGGTGTCCGCCTCCACGTCCACCACCTCGTCCTCGTTCGCCGGTGCTGGCACGGAGAGCAGCTTGGTTGGCGGCCTGAACATTCGCACGGACGAGAAGATGCCCGCCAAGGGAGAGATCTCCGAGCAGGAGAGCAACTGTGACATCGAGAACTCGTGGAGTGAGTCGGTTTACGGGGACATTTCGCAGCGGTACTTCAGGAACCAGTTCTCTGGCGGCTACAACCCTGACTGGCGACAGGACTACTACCCGGCTCAGGATCTCAGCGGCGCACAGCAGAGGGAGCATAAGCGCTTCGACTTTAATGCGATCGATGATGAGGCCTCGTCCAGCTCGAGAAAGAGCCAGCTAACGGATATCGTCCCAAATGTGGCCACCTCCTCCACTTCCACGTCATCGGCTTTGCTGGCGGGTCCACCAATAGCTTCGACGTCAAGGGCTGCCGCTGAGGCGgcagcggaggcggcggctgctctcgcccagcgaaaaccacaccGCCGCAAGCTGTACAAGTGCCCCCATTGCGAAACCATCTTCGAGAAGCTGAAGGAGCGGAATGCCCACATGATCAGCGACCACAACTATGTGCGTCAAAACCGGAGACTCATCTGCACCCAGCAGGTCGGTGAGCCGATGCTGCCCCAGCAGCACGcccagttgctgctgcagacgGACGAGGCTGTGCATGAGGACTCCAAGGATGGCATTGTGAAGATCAAGCAGGAGCAGTGTCCGGATAAGCCGGAAGTCGAGCAATTGCACCACGCCAATTCCGCGGAGCTGCTGTCGGATGTCAAGGACTCGGAGCTGCTGGGCATCGGCGGCGAGGGCGATGCGGACCTGGACGGCGATATTAAGCCGCCTAGCCAGCTATTTGAGAAGTCGtcgccactgccgccgctggccATGACAACGCCGGCAGCAAAGCTGGCGGCGCTTTATCGCATGCTCATCGCCTACAACGAATCGAAGCTGGGCCAGGAGCGCAACAACCTCAGCGAACTGGAGCAGAAGGCCATGGAGAAGTCCATCTTTCTGTGCTACGTCTGCCGCACCGACTTTCCCTCCGTCAAGCTTTACGACGCCCATCTTACCGAGCACCCAGCCGAATGTTTCACCTGCGGGAAGAAGTTCTACCGCTGGAAGAACTTCTCCCTGCACCTGAAGCGGCATCTGGGCTGGAAGGAGTTCGGCTGTTATGTGTGCGACAAGAAGTTCGTGGTGCGGAGCGCCCTCGTCGAGCACATGCGGATGCACACGGGCCAGACGCCGCTCAAGTGCAAGATATGCGGGAAAAAGTTCAAGCGCTACTCGAATCTGACGCAGCATCGCAAGCGCCACACCAAGGTGATGGTGCGAAAGAAGGAGTACGTGTGCCACTGCGGCGAGGTGCTGCCCTCAAAGGCGCGCTTCCTCTGGCACAAGGAGACGCACGACTTGAAGCCGAAGTGCTGCCCGTATTGCTGTGACCGATTCGTGCACGCCAACTCGCTGCGCCGCCACATACGGCTGGCGCACTCGGACAAGTTCGACTACGCCGAGCCGATGGAGTGCCCCATGTGCAAGCAGATCTTCGCCAAGACCTCGATCAAGGCCCACATGGCGACGCACTCGACGGAGCCGCAGTACGACTGCGCCATCTGCAACAAGAGCTTCTCCACCAAATGGAATCTCAAGATCCACTCGTGGGTCCACGCCAACCGGACGGCCAAGCCCTTCAAGTGCGAGTACTGCCCGAAGGCGTTTGTGCGCGAGCTGGACTTCAAGAACCACATCAATGCGCACAAGCAGATCAAGCCGTACACGTGCGAGTACTGCGGCTGCAAGTTCATCCGCAAGTACAACTACATGCGGCACCGACGCGAGCACCACGGCACCAAGAAGTTCACCTGCGACCAGTGCGACAAGTCCTTCCACCGGCACTACTATCTGATCGAGCACCGGCGCATGCACACCGGCGAGCGACCCTTCACCTGCACCATTTGCGGCAAGAGCTCCACCACCAAGACGAACCACAACAAGCATCTGAAGATCCATCACTCGCGCGACCCCTTCACCGTGGAGGTCTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSGGMGSALAAAMMSGGSGAGGGGASDGGEASMADNKTAFTLSSPCGDVKPVVASTPPAMSKTISAAMPAVPPAPPLPPLSSANATPPCTSPSASSSTSSSSSNSNLSNPPMKALKCAPPTTEARANTSAHPTTSSVSTLYQSSLVAPDYRFNHQQQQQSGFGRGVAGTNAATLVIPQVAQQHFLTSHQQQAHFTHQQQQQQQQQQSSLKFTYTTALPPPPPLQTQAATIHSLGQHQQNHQSHPQPHAHPHSQQQTHHHHHQQLGPSPASRLQQQQQQSLSLQTYGPGVSSSCSSSSASSSSCAAGSRGTRQTNSPFGALLNAAAAVACNTPASTSACSSVLRFAESPVAHYLERDNGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDDEEDEEEEEEDDNDHEAQPEEEVDGDDEREENSRSRSRSRSRNMNKTTKKSRKAKPKRSSKRVLDEDEEFMSISSGCESESEAERKPESTSSVPPPLCTGPSTSSAAAAAAAAAGTSSNLADTHSNSASNSASNSTSTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAGRPFAAVVPIPLVKVEKEEPMDEYDDSEAAQQLEQKPSLEHHGTTSVIRMASTVAATTTTPVTEEASAEDLNEPPLMKVEVEPNTMLLPQRFSTPAQSRGPKKLVIKPKATATASATASAPATATTTKKTDTSPSSSSSNNNNNNNNTSISKDLGQVQVKSETLEAPAANSSSSILEKHLTTNRSQMQPHHSAVNDDDARVLLEFANSKQPPPLAASSTTFVVNASTGFPSAGSVFASSSSSSKPASKPGEEYILPDNTNLEVDEIVISSSSSYASSAAQVQAALQPPDFNFLYHQTTTSTATAATYPFNAFSRQHQHLHQQQLQQQQHGVSDATNAATLASSSSNSMDHDSMNASFRVAKTQSLQWYQQQEQENDPQIQAEGAGASGVSSNHSHTDVVVSHQPTNFNAALAAVDCCSAAATLDEEAKYLDLDTCKREQLSSSSNLPSVSASTSTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRYFRNQFSGGYNPDWRQDYYPAQDLSGAQQREHKRFDFNAIDDEASSSSRKSQLTDIVPNVATSSTSTSSALLAGPPIASTSRAAAEAAAEAAAALAQRKPHRRKLYKCPHCETIFEKLKERNAHMISDHNYVRQNRRLICTQQVGEPMLPQQHAQLLLQTDEAVHEDSKDGIVKIKQEQCPDKPEVEQLHHANSAELLSDVKDSELLGIGGEGDADLDGDIKPPSQLFEKSSPLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKVMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00617887;
- 90% Identity
- -
- 80% Identity
- -