Dbak027122.1
Basic Information
- Insect
- Drosophila bakoue
- Gene Symbol
- -
- Assembly
- GCA_008044335.1
- Location
- VNJL01003019.1:1-3337[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00085 3 8.6 2.8 17 38 15 37 8 40 0.84 2 12 0.00056 2 9.2 3.0 6 32 33 59 32 65 0.76 3 12 0.004 14 6.4 3.0 6 33 57 88 55 94 0.72 4 12 0.00032 1.1 9.9 5.1 5 38 88 121 84 122 0.80 5 12 0.0039 14 6.4 4.3 9 38 120 149 116 156 0.78 6 12 0.0021 7.3 7.3 6.4 11 38 150 177 144 178 0.79 7 12 0.0033 12 6.7 5.8 16 33 182 200 172 206 0.72 8 12 0.0015 5.3 7.8 5.0 17 38 211 233 200 237 0.77 9 12 0.028 97 3.7 9.7 14 43 236 262 228 263 0.81 10 12 0.9 3.2e+03 -1.1 0.0 18 26 269 277 268 283 0.83 11 12 0.47 1.6e+03 -0.2 1.9 19 38 302 322 297 323 0.89 12 12 0.0024 8.3 7.1 3.6 18 44 329 352 315 352 0.84
Sequence Information
- Coding Sequence
- atgcttGCGCTGCTAATGCGAATGCGATTTTGTCAAACGCCGCACCAGTGTGATGTCTGCGGCAAGAAATATACGCGCAAGGAGCACCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAGATCTGCGGCAAGAGTTTTAGCCGAAAGGAGCACTTCACCAATCATATACTCTGGCACACAGGCGAGACGCCGCACCGGTGCGACTTCTGCTCCAAGACGTTTACTCGCAAGGAACATTTGCTTAACCACGTGCGCCAGCACACGGGAGAGTCGCCACACCGCTGCTCCTACTGCATGAAGACATTCACGCGCAAGGAGCATCTGGTCAACCACATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAGTCGCCGCACAAGTGCACATACTGCACAAAGACGTTTACGCGGAAGGAGCACCTGACGAACCATGTGCGCCAGCACACGGGCGACTCCCCGCACCGCTGCTCCTACTGCAAGAAGACGTTCACGCGGAAGGAGCACCTGACGAACCATGTACGCCTCCACACGGGCGACTCGCCGCACAAGTGCGAGTACTGCCAGAAGACGTTTACGCGGAAGGAGCATCTCAACAACCATATGCGCCAGCATTCGAGCGACAATCCGCACTGCTGCAATGTCTGCAATAAGCCGTTCACGCGCAAGGAGCACCTGATCAATCATATGTCGCGCTGCCACACCGGCGATCGGCCCTTCACCTGCGAGACATGCGGCAAATCGTTCCCGCTCAAGGGCAACCTGCTTTTCCATCAGCGCAGCCACACCAAGGGCCAGGAGATGGAGCGGCCCTTTGCCTGCGAAAAGTGTCCCAAGAATTTCATCTGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACTCTGTGCAGCAAGGCGTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCgtgcatccgcatccgcaaaTACCGGCTGGTGTGCTGACGCAAGTCAAGCAGGAAGTGAAACCGATCATAAGTGAGTCGGCAAACACGACTGCGCTAGCGCAAGCGCGTCTTCTCCCCGTGCCCAAGTCGTTCAACTTACCCGGCCCTCCTACCGTTTCAGTTCCCCACCA
- Protein Sequence
- MLALLMRMRFCQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQEMERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIISESANTTALAQARLLPVPKSFNLPGPPTVSVPH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00485272;
- 90% Identity
- iTF_00485272;
- 80% Identity
- iTF_00485272;