Basic Information

Gene Symbol
-
Assembly
GCA_008044335.1
Location
VNJL01012720.1:130604-135694[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00083 1.5 9.6 0.1 21 45 779 801 768 802 0.85
2 2 3.6e-05 0.068 13.9 0.1 23 44 1057 1080 1047 1082 0.86

Sequence Information

Coding Sequence
atgAGTACTCCGGGAGGCAGCGATGTGGCGCTGGTGAAGGCGACAACACCGTCGCCCTCGCCGCTGGCAAAACTTGATGTTGACTATTTGGGTTCCAGGTTCGAGATGCATACATCGCTGTCGGAGGAGGAGCGTCGATTTTATTTCAAGATGTATCCCAACGTCGACATCGTAAACCAGCGAACAGTTCACTGCACAGTGTGCCGGCAGCATCTGGGCACCGCCCTCTCGGCTGAGAACAACATCAAGATGCATCCAATACTACGCGTGACGCACTGCGTCAAGTGCCACGACTTCTACAACAGCGGCGAGTTCTCGAAGGGTGAGGATGGCTCGGAGCTGTACTGCCGCTGGTGCGGTCAAGGAGGCGAGGTCTACTGCTGCTCCACCTGCCCGTACGTGTTCTGCAAGTCGTGCATCGTGAAGAACCTGTCCAAGGGCGTCATCTTGGACATTGAACAGAACGAGCACTGGAACTGCTTCAACTGCACCTCGAAGATCCTCTGGCCCCTGCGGGCTCAGCACTGGGCGCTTGTCAATTACATTCAGGCGACGAAGAAAGCTCTACAATCCATGCAGCTGCCTGAGCTGGAAGCCCGCCGCCATATGCTCAAGGACAACACTAGCTGCTGTCGGCTGGCCAAGTCGAAGGCCACCAGCCTCTCGGACTCTATGGAGAGCCTGCAGTCCAATACCTCAAAGCGCAGCCAGGGCAGCTCGGCGAAATCGGCCAAGAGAACACTCGGGTCGTCCAAGTCGAGTCCAGGGCCGTCAAACAAACGCCTCAAGTCCTCCAACGACGAGGTGGTCTGCACACCCGATCTGCTCAGCATGCTGGAGCCGGACTGCCAGCTCTCCATGCTTCCCAAGCCGCCGGGCCGTCAGCCGGCGCCCAATATCGCCACCACCCCGAGGATTGTCACCGTCCAACAGAATTACACGGGACCGAGTCCCAGCACTAGCAGCACCAGCAATGGGAGTAGCCCCTCCACCTCGATGGGAGTGCCGCGCGCCAGCCTGCCGCCACCGTTGGTGCTCAGTGGCTCGGGGATTCGGTATCGTCAGAGTCCTCCTGCCAGTGTAACGAGCGTGCGCCGCACTGTGGTGCCCAACGTGGTGCGCAACAGCGGCCCCGTCTTCCACACCATCAATGGGTACCGTGTGGATCTGAACAGCGCTGCCCAGCAAGACTCGTACCGCCTTCCCAACGGACGGTTGATCCAAGTCAAGCGCCAGATGCCGTTGGCCAACCCACCGGCCGGTGCGCCAACGACGCCAACGCCCATAGTCATCCCTCCGTTAAACTCGGGTGTGGTCATTCGTCCGCGAGGCCCAGCTCCAGTTGGCAGGGCACCGGGGCAGGGCAACGCCTTTGGAAACAACATGGGCATTTACAATCCGCAAaccaaccagcagcagcgggcgcCGCCGGTTGTGCGAGTTAACCAAAACCAGACGGCTGCTCCAGCGCCAGCACAAGTCCCAGCCCCGAATTCCAACGGCAGTGGAGGCGGTGGACAGACTCTGATGATTACTCCAGTGCCGGGTCCGCACAAGCCTCCAAGTTTGGTGCGGCACAACTTTCCAAACACGACGCTAGGGCAGGCACGTTCCCAGCTTCAGGAGCAGATCTTCAGCGCAATGGAAATTTGCACGCACCTCACCGGCAAGGTGGTGTCCCTCACCCACTCGAATGCGTACAACCAGGTGCGCAATCACCTCGATCTGAAGGAGCTGTACATTCACATGTCCTACCTGATGACCTACGCCATCGGTCGGTTCAAGCACCTGCAGGAGAAGTGCCTGGTGGACATGCGGGAGATGGGCTTCAAGAACGATGCCAATAGTCTGGAGAACGGACAACTGGCTGCTGCCGTCGACTATGTCTGCTATGGCCAGCTGGACGACGTGGATCTCTTTAACACGGGCTGCAACAGTTTCCACAACCAGGTATATGAGTATCGCAAAAGCCTGCATGCCAACTTGAAGGAGGGCGAGGACTGCgagccactgccgccgctgctgccgctcggAGTTCGAGCCGAAGGCGATCCGATCGATGAGGAGGAGCCCCCCGAGTTGCAGCCAGGACAGAAGCAGgatgcggaggaggaggcaaaTGATTTCGATTACGACGAGACGGAGGATTTGGATGATGATTTGGACGACGACGATCTGGATAACGAGGAGTGCGGCGAACTGGGTACCGAGGAGAGCATGAATCGAAACGAACAAGCTCACGCCTACGACCGGAAGCTGACCCGCCTGCTCCGCGAATATCCCTCGCTCTGGTGCACCCGACACCCGGACTACGGCAAGAAAGAAGTCACCCTCAAGCAGTGGCGGGTGATCGCCACCCACTTCCCGCGTGGCGACGATATCAAGCTGCGCTGGAAGAACGTGCGAAAGCGATACGTGCGGATCGAGCGTCGGTTGAAGCAGGGAAAGCGCTTCAAGGGCTACTTCGACAAGGCCACCAACTATCTGGCCAATAGAGATCGCCCCAGAAGCGAGTGGCTGGCGGTGGACTGTGGCGAGGACGATGGCGACGGTTTTGAACGGAAGCAACTAGACGTCATTGAGAACACAATGGAACATGGAGAGCAGAAGCCGGCTCATCCGCCACCGCCAGCAAGCAAACCTAAGCCACGTTTTCCTATGCGACCCCTCGAGGTGCGTGCCATCGATCAGCGCATCATCACCTTCGCCAAGAGCCATCCCGTGCTCTGGCGCAAGTCGACCGATCCCGAGTTTAATAGTATTGACGAGCAGACCAGGAAGTCTTTGTGGCAAAACTTCTGGAAGACTGCGCCCAATTACGCCTGCGAGTACCTCGTCGAGCGCTGGCAGCAGATGTACGAGATGTACAAGTCCTTCCGCCTAAAGAGCATCAAGGACAAGGGCATTTTCGCGAATCTCGAGCTAAAGTATTCCAAGTACTTGGCAAGCCTGTATTTCCTATACAAAATCGATGAGCAGGACCTGCGCGACGAGTTCGAGCCCCTGCAGGATTGCGTGCCAAATGGCAGCGACATGGCCGGCAGGCTAAAGGACATGCCGGACGACAAGCAGTTTGCCCAGCAACTAGTGCTGGCCATACGGGCCTATCCCACTCTGTGGAATCCGCGGCATGTGGACTACAACGATGTGGGCGCCAGGGAGCGCCTGTGGCCGGAGGTGGCCCGGAGGTTGCCACGCTTCAAGCGGGATGCCAAGGCCTGCAAGCTGCGCTGGCAGATGGCCAAGTTCGCGTACGAATGCTATTGCCGCGAGATGGAGCGACAACCACCAACGCGGGCCAGcgagcagaagctgcagaagaTGCGAGCCAATTTCCCTCTCGAAGAGATGCGTTTCCTCAACACTTAG
Protein Sequence
MSTPGGSDVALVKATTPSPSPLAKLDVDYLGSRFEMHTSLSEEERRFYFKMYPNVDIVNQRTVHCTVCRQHLGTALSAENNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVILDIEQNEHWNCFNCTSKILWPLRAQHWALVNYIQATKKALQSMQLPELEARRHMLKDNTSCCRLAKSKATSLSDSMESLQSNTSKRSQGSSAKSAKRTLGSSKSSPGPSNKRLKSSNDEVVCTPDLLSMLEPDCQLSMLPKPPGRQPAPNIATTPRIVTVQQNYTGPSPSTSSTSNGSSPSTSMGVPRASLPPPLVLSGSGIRYRQSPPASVTSVRRTVVPNVVRNSGPVFHTINGYRVDLNSAAQQDSYRLPNGRLIQVKRQMPLANPPAGAPTTPTPIVIPPLNSGVVIRPRGPAPVGRAPGQGNAFGNNMGIYNPQTNQQQRAPPVVRVNQNQTAAPAPAQVPAPNSNGSGGGGQTLMITPVPGPHKPPSLVRHNFPNTTLGQARSQLQEQIFSAMEICTHLTGKVVSLTHSNAYNQVRNHLDLKELYIHMSYLMTYAIGRFKHLQEKCLVDMREMGFKNDANSLENGQLAAAVDYVCYGQLDDVDLFNTGCNSFHNQVYEYRKSLHANLKEGEDCEPLPPLLPLGVRAEGDPIDEEEPPELQPGQKQDAEEEANDFDYDETEDLDDDLDDDDLDNEECGELGTEESMNRNEQAHAYDRKLTRLLREYPSLWCTRHPDYGKKEVTLKQWRVIATHFPRGDDIKLRWKNVRKRYVRIERRLKQGKRFKGYFDKATNYLANRDRPRSEWLAVDCGEDDGDGFERKQLDVIENTMEHGEQKPAHPPPPASKPKPRFPMRPLEVRAIDQRIITFAKSHPVLWRKSTDPEFNSIDEQTRKSLWQNFWKTAPNYACEYLVERWQQMYEMYKSFRLKSIKDKGIFANLELKYSKYLASLYFLYKIDEQDLRDEFEPLQDCVPNGSDMAGRLKDMPDDKQFAQQLVLAIRAYPTLWNPRHVDYNDVGARERLWPEVARRLPRFKRDAKACKLRWQMAKFAYECYCREMERQPPTRASEQKLQKMRANFPLEEMRFLNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480108;
90% Identity
iTF_00594485;
80% Identity
-