Dbak014419.1
Basic Information
- Insect
- Drosophila bakoue
- Gene Symbol
- -
- Assembly
- GCA_008044335.1
- Location
- VNJL01004504.1:19300-24731[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-11 2.5e-08 34.1 0.0 1 40 664 704 664 707 0.90 2 3 5.8e-14 1.4e-10 41.4 0.1 2 39 719 756 718 759 0.94 3 3 5e-11 1.2e-07 32.0 0.0 1 30 773 802 773 803 0.97
Sequence Information
- Coding Sequence
- ATGGAGGATGATGAGGGTGAGGGTGAGGGtgagggcgagggcgagggccATGGCCTCTTGCGCACCGCCGAACAGCTAAAGATCAAGGGCCTCTGCGAGACCGCCGAGAATGCAGATGACTTGAACGACGCGGCCACAGCAACGATCACAGTATCGGAGAACATTCAGCAGGCGGTTGTGGGAAACATTGTGAATGCAACCATAGTTCCTGGAGCTCCTTCGCCCTCCttggaacagcagcagcagcaacaccaccaGTCGCAGGCacaggaccagcagcagcaggttcatgcccagcaacagcagcagcagcaaatcaACGCCGGCTTGCTGACGCAACACGGAGTAGTGCCCAGTGGCAGCAGTGGTGGTGTTCCCCTATCCGGACAGCTGTTGAGCTCAGCGGGGAGCGGCACTAGCGGCGGCAGCGGTACCTCCGGTTCCTCCGGCGGACAGCAGACTTCACTGACGCCATCCGGCCTGCAGGCGACGCCACGCAAGTCCCGGCTAAAGCGATCCAAGTCACCGGATTTGCCGACAGTTTCTGGAAGCTCGGGTGGCTCAAGCAACTCACagtcacagcagcagccgcagcctgCGCACCACCATCCCCACCAGACCATTCTCATCCAGGGCCAGAATCCCACCTCGATTGTTAGCCTGCAGCAGACGGCCGACGGCAACTATATACCGGTGGGAGCCGGAACTGGCGACGAGTCGGACACCGAGAACGATcacgagcacgagcacgaACACGAGCATATCCACGGACACGGGCACGGACACGGACATCcccacggacacggacacggccacagtcacagtcacgaTCACGACCACGATCACGACCACGACGATCACGAGCTCGAGAGTAAACCGAGTAAGATCTGCAAAACTGAACATTCGGTGGCATCGCCGGCGTCCAATTCATCGAGCGCGAACTCAAACAATGCAGCGGGCGTGAGCGGCGGCGTGTCCACCACCGGCAACCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCCCAGCAAATACATCGGCTCGATCAGTCCCCCATGCACTCGATATCCCATCACCACACCGGCGACGAGAGCAACTCGCAACTGGTGCAGCACATCAAGAGCGAGGTGATCGAGGCCAAGCAcctggcagctgctgcccagCAGCATGCTctcaatcagcagcagcagcagcaacagcagcagcatgcccATCACcaagcccagcagcagcaccagcaacagcagcaacagcagcaccagcagcagcagcaacagcaacagcagcatctccATGCCCAGCAGTTGCAGGcccagttgcagcagcaacagcagcagcaacaccaccagcagcaacagcaacagcaggcagcagcggccgcagcagcagctgctgcaggtgtGCATGGCCAACATGGGGGACACGTGACGCACGCCGATATTGGCGGGGCCACAGTCATGGAGATCGATCCGAGCCAAATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGACATATGGACATGTACAATTCGGACACGAGCGAGGATTCAATGATGATCGCCAACGGCTCGCCACACGATCAGAAGGAGCCGCACTATACGAATTTGGACCAGCAGCACGGtctgggcggcggcagcgtTTGTGGCCCGGGGCcaggtggtgctggtggtggtgggggcaTGAGTGGTGgggctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGCTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCGTCGACGCTCTACAAGATTGCCCGACGGGAGGGCATCCGCCTTGCGGCACCGTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGACCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAAGCAAGTGCCGAGTTTGGCATACCAACAGCAAAGAAATGA
- Protein Sequence
- MEDDEGEGEGEGEGEGHGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLEQQQQQHHQSQAQDQQQQVHAQQQQQQQINAGLLTQHGVVPSGSSGGVPLSGQLLSSAGSGTSGGSGTSGSSGGQQTSLTPSGLQATPRKSRLKRSKSPDLPTVSGSSGGSSNSQSQQQPQPAHHHPHQTILIQGQNPTSIVSLQQTADGNYIPVGAGTGDESDTENDHEHEHEHEHIHGHGHGHGHPHGHGHGHSHSHDHDHDHDHDDHELESKPSKICKTEHSVASPASNSSSANSNNAAGVSGGVSTTGNQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSQLVQHIKSEVIEAKHLAAAAQQHALNQQQQQQQQQHAHHQAQQQHQQQQQQQHQQQQQQQQQHLHAQQLQAQLQQQQQQQHHQQQQQQQAAAAAAAAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTAKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -