Basic Information

Gene Symbol
Arid4b
Assembly
GCA_008044335.1
Location
VNJL01004523.1:12744-14872[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.2e-29 1.5e-25 90.0 0.1 1 88 296 381 296 382 0.96

Sequence Information

Coding Sequence
ATGCAGCAAATGGACGATCCGCCTTCGCTGCCCGTGGGCACGGAGGTGAGTGCGAAGTACAAGGGCGCCTTCTGCGAGGCCAAGGTCAGCAAGGTGGTGCGCAACATCAAGGTAAAGGTGGCCTACAAGCAGGGCCTGGGCTCTGGCATCGTCTCCGACGACGCCATCAAGGCTCCAACTGGCCAGCTGCGCGTGGGCGCCGTCGTGGAGGTCCGTCATCCGGACCGCAAGGAGATCGTGGAGGCAACCATTACCAAGATCCAGGACTGCTCCCAATACACGGTTGTGTTCGACGACGGCGACATTACAACGCTGCGGCGAACGGCTCTGTGCCTGAAGAGCGGGCGGCACTTCAACGAGAGCGAGACGCTGGACCAGCTGCCGCTGACGCATCCGGAGCACTTTGGCAATCCCGTGGTGGGCGGACGCCGGGGACGGCGGCGCGGGCAGCTAAACGAGGACAGTtccgatgacgacgacgaaaGCGATGCCAAGGAGGTGGTCAacgagaaggaggagaatATTGGCAAGGTGGTGTGCGTGGAGACCGAGTCCAAGAAGAAGGACAAGGAGAAATGGTTCCCGGCGCTCGTAGTGGCGCCCACAGCACAGgccACCGTCCGCATCCGCGTGAAGGACGAGTACCTGGTGCGCTCGTTCAAGGACGGCCGCTACTACACGGTGCCGAAGAAGGAGGCCACCGAGTTCACCCGCGAAGTGGCCAGCAAACAGGACGTGCCTGCTGTGCAGGCGGCCCTCGAGTTCCTCGACAGCAGCATCCTGCCGCCGCACTGGGACCGCGACTCGCTCTTCGGCCTCTCGAATCTGTCCAGCGACGACGAGGGCGAGATCGACTCGGACTCGTCCGACGACGAGCCGCACGAGGAGAAGGATCGCTTTGTGGCGCAGCTGTACAAGTACATGGACGACAGGGGCACGCCGCTGAACAAGGTGCCGTCCATTCAAAGCCGCGACGTGGACCTCTATCGGCTCTTTCGGGCGGTGCAGAAGCGCGGCGGCTACAACCGCGTGACCAGCCAGAACCAGTGGAAGCTCATAGCCGTCCGCCTGGGCTTCACGCCCTGCACGGTGAGCGTGATGAACCTGGTGAAGCAGGCGTACAAGAAGTTCCTGCAGCCGTACGGCGACTTCCACCGCAAGCTCGGCTGCTCCATGCTGATGACCTCCAGGAACTCGAACCGCAGCAAGGGCCGCAGCCTGGTGCGCGCCAATTCGGTGGCCTCGCCCAAGCCCACGGAGACCACGAAGACGGAGACGATCAGCAAGTTGGCGCAGCCAAACCAAACGAACGTGGCCGCGGCGTCGTCTTCAACTGCAGCCTCAAGCTCAAGCtcctcggcagcagcagcagtggcatcAGCCACCCCACTCAGAGCCGCGTCCACCGCCTCCCAATCGGCGCTCGAGGTGGAGTCGGAGGACACCAGCGAGTCCAGTGTGGTGGTCGACTTGCCGGCAAAGAAGCAGAGGAAGGGctcggcagccagcagccatcAGCAGGGGAAGGTCAAGACGCTGGTGGAGAAGTACGAGGAGAAATCGACGGCAGCACAGGCTTCGTCGAGCGGAggagcagcggctgcagcaggCCAAGGATCGACTGCAGGCCCAACCGCAGCAGCTACTTCGGGAGTAgcctcctcttcctccgcAACCCATCCAGCGGCTTCATCGTTTGCCCCCGTCGCCGCATCTGGCGGTTCGCTCACCGCATCCACAGCTGCATTCAGCAAGGACACCGAATCGGACATGCCgctggccaagatcaaggcagcggcagcagcagcagcggcggcagcggccgcaAACAGGAACAACAGCATGGAGAAGGAGACGAACCTCAGCTCGGGCAGCAGCGCCTCCGCCTCCAGCAAGGCCAATTCGGCGGAGATGCAGCGCAGTCGCGATGTCTCGCCTTCAGGTGAGTGA
Protein Sequence
MQQMDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAPTGQLRVGAVVEVRHPDRKEIVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNEDSSDDDDESDAKEVVNEKEENIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREVASKQDVPAVQAALEFLDSSILPPHWDRDSLFGLSNLSSDDEGEIDSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTSQNQWKLIAVRLGFTPCTVSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPTETTKTETISKLAQPNQTNVAAASSSTAASSSSSSAAAAVASATPLRAASTASQSALEVESEDTSESSVVVDLPAKKQRKGSAASSHQQGKVKTLVEKYEEKSTAAQASSSGGAAAAAGQGSTAGPTAAATSGVASSSSATHPAASSFAPVAASGGSLTASTAAFSKDTESDMPLAKIKAAAAAAAAAAAANRNNSMEKETNLSSGSSASASSKANSAEMQRSRDVSPSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00550043;
90% Identity
iTF_00617417;
80% Identity
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