Basic Information

Gene Symbol
TFCP2
Assembly
GCA_008044335.1
Location
VNJL01010747.1:1-7550[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-31 1.2e-27 97.3 0.0 80 187 1 107 1 114 0.92
2 2 1.6e-13 8.9e-10 38.8 1.5 186 222 162 198 158 199 0.92

Sequence Information

Coding Sequence
AGCGTGATCAAGATCTGCTTCCACGAGCGCCGCCTCCAGTTCATGGAGCGCGAACAGATGCAGCTATGGCAGCAATCCCGCCCAGGCGAGCGCATCATTGAGGTGGACGTGCCGCTATCGTACGGCCTGTGCCACGTGTCGCAGCCGCTCAGCTCCAACTCGCTGAACACCGTCGAGATCTTCTGGGACCCCCTGAAGGAGGTCGGCGTCTACATCAAGGTCAACTGCATTTCAACCGAATTTACCCCAAAGAAGCACGGCGGCGAGAAGGGAGTGCCCTTCCGACTGCAGATTGAAACCTATATAGAAAACACAAACAGCACCAATACCGGCTCGGGTGCCGGTTCCGGCCTAGGATCTgccggcggcagcaacaacagcgccAGCAACGGTGGCGGcagtggcaacagcagcaacggcagtgGCACAGCCAGCGGCAACACAGCTCCAGCATCGCCGGAACGTTCGCCCAATGGCGGAGGACAGGCCAAGCAGGCCGTCCATGCCGCTGCATGCCAGATCAAGgtCTTTAAGCTAAAGGGCGCTGATCGCAAGCATAAGCAGGATCGGGAGAAGATCCAGAAGCGTCCGCAATCTGAGCAGGATAAGTTCCAGCCCAGCTACGAGTGCACCATCATGAATGACATATCCCTGGATCTGGTGATGCCCGCCACTACCACTGGCTGCTACAGTCCCGAGTATATGAAACTCTGGCCCAATTCGCCCGTACATATACCCAAGTACGATGGGATACTTCCGTTTGCCCCGAGTGCAGCATCGCcggccaccagcagcaacagtccCATTGCCATCAACTCGGTGACGTCGACCAACTCACCGACTCTGAAGCTAATGGACGCCACAAATATGGTATCGCCGCAGCATGTGCCCGCCGACATGGACGACTATaaccagaacatcaTGCCGGAATCGACGCCCGCGCAAGTGACGCAGTGGCTGACCAATCACCGCCTCACGGCCTATCTCTCAACGTTCGCACACTTCTCGGGAGCGGATATTATGcgCATGTCCAAGGAGGATTTGATACAAATCTGCGGCCTGGCCGATGGCATTCGCATGTTCAACATTTTGCGCGCCAAGACCATTGCGCCTAGGCTTACGTTGTACGCCAGCTTGGATGGTTGCAGCTACAATGCCATCTACTTGCTGTCCAACACGGCCAAGGAGCTACAGCAGAAGCTGTTCAAGATGCCCGGTTTCTACGAGTTTATGGCCAAGGCCAGTGCCCAGGAGAatggcggaggcggaggcagtgccgctgctgcagctgcagctgcagctgcgctgTACAACAACTGGAGCATGCACTCGAAGTACTCGGGCAGCGGCTCGAACATCTTCAACGATGCCAACAAGAGCTGCGTGTACATCTCGGGGCCGTCGGGCATTTTGGTCAGCGTCACCGACGAGGTGCTCAACAACGAGATCAAGGACGGCAGCCTGTACGCCATGGAGGTGCAGGCCGGCAAGGTGATCCTCAAGCTGATCAACAAGCAGGACAACATTTGA
Protein Sequence
SVIKICFHERRLQFMEREQMQLWQQSRPGERIIEVDVPLSYGLCHVSQPLSSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNSTNTGSGAGSGLGSAGGSNNSASNGGGSGNSSNGSGTASGNTAPASPERSPNGGGQAKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLVMPATTTGCYSPEYMKLWPNSPVHIPKYDGILPFAPSAASPATSSNSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDDYNQNIMPESTPAQVTQWLTNHRLTAYLSTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASLDGCSYNAIYLLSNTAKELQQKLFKMPGFYEFMAKASAQENGGGGGSAAAAAAAAAALYNNWSMHSKYSGSGSNIFNDANKSCVYISGPSGILVSVTDEVLNNEIKDGSLYAMEVQAGKVILKLINKQDNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00606081;
90% Identity
iTF_00606081;
80% Identity
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