Basic Information

Insect: Drosophila azteca
Gene Symbol: -
Assembly: GCA_005876895.1
Location: VCKU01000088.1:3523035-3524911[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.6e-06 0.00021 21.4 1.4 1 23 252 275 252 275 0.97

2 8 1.7e-05 0.0014 18.9 0.9 3 23 286 306 284 306 0.93

3 8 0.0041 0.34 11.4 0.1 1 23 315 338 315 338 0.92

4 8 0.00039 0.032 14.6 0.0 3 23 348 368 346 368 0.97

5 8 6e-05 0.0049 17.2 6.4 1 23 374 396 374 396 0.98

6 8 6.9e-05 0.0057 17.0 0.2 1 23 401 423 401 423 0.98

7 8 1.4e-06 0.00011 22.3 1.7 1 23 429 451 429 451 0.97

8 8 0.016 1.3 9.5 4.7 1 23 457 480 457 480 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.6e-06	0.00021	21.4	1.4	1	23	252	275	252	275	0.97
2	8	1.7e-05	0.0014	18.9	0.9	3	23	286	306	284	306	0.93
3	8	0.0041	0.34	11.4	0.1	1	23	315	338	315	338	0.92
4	8	0.00039	0.032	14.6	0.0	3	23	348	368	346	368	0.97
5	8	6e-05	0.0049	17.2	6.4	1	23	374	396	374	396	0.98
6	8	6.9e-05	0.0057	17.0	0.2	1	23	401	423	401	423	0.98
7	8	1.4e-06	0.00011	22.3	1.7	1	23	429	451	429	451	0.97
8	8	0.016	1.3	9.5	4.7	1	23	457	480	457	480	0.97

Sequence Information

Coding Sequence: ATGGCCGCCGTCCCTTTGACTGGCCATGAGGGCAGAGCCACCGACTGGCATCTGTGGTGCCGCCTCTGTGCCAAGGACGACGTGCACGGGAACATCAACGTGTTCCTTAAGCACGAGCATACGGGAGGTCCAGGAGATGGCTCTGGCAGCGATCTGGCCCTGGCCACAGCTATTGGCAAGTACTTTTGGGTGGATATAACGCGGGGCGAGGAGCTGCCAGAAATGATCTGCACCGACTGCCTCACACTGGTCACAACTTTAGTCAACTTCTCGGAGCGCATAACCCGCGTGCAGAAGCTCTACTGCATTCTACAGACCACTGCCAAGCAGGAGCATGTAAATCTGCAGGAGCTTCGATCCAAGTTTGGGCTGCTGGAGGAGGAACCAGAGACCCTTACAGAAGTCCACTATGTGGAGGAGAAACCCAAGCTGGGGGCCCAAGGCGACCTACTCATAGAAGAGTCTACATTTGATATGAAAAACCCGCTAATTGAGACGGCAGATGATCAGGAAGAGGAGCCTGAGGAAGCAACAAGTAGAAGTGAGGAGAATGAACCCGAATCGGATCAGGAAGAGgaggagccggagccggatCAGGAGGAGGAGTACGAGGAAGCGGATGAAGATGCTGTGCTGCTGAAGCTATGCGATGCCTATGGAATAACAGAGGACAACTCCTCACAGGACAGCCACAAGTGCTCCCGAAGCACCCCTCCTAAACAGAGCAAATCGAAAGAAGACCCCGACAAGGCCCATCAGTGCACCATATGCACTCGAGCCTATGCCAGAGCCAGCACCTTGAATCGCCATCTGCGGCAGGATCACGACGGGATGTTTGAGTCCAATCTGCTGGCGTGCCGAGAGTGTCCGAAGAAGTTTCGCACTCGCTATCAGCTGGAGCGGCACAGCCAGGGCCATCTGCCGATGCCCAAGCGCAAGGTGTATCCTTGCGCTAGCTGCGACAAGATGTTTACCAGCAATGCCTCCGCCGTGCAGCATGCCCAGTACCAGCATTTGGATGAGCGACCGCGTCCCGTGATCTGTGAGCAGTGCGGTGTGCGTGTCACTTCCATCAGCAACCTCAAGGTGCACGTGCTGACGCACACGGACGATGCCCCCTTCGAATGTGATGTGTGCAAGAAGTGCTTCAAGAGCGCCAGTCGACTGAAGCACCACAAGGAGACCCACGATCCGCACAAGTACATCTGTCCCGAGTGTGGCATGCAGTTGAATTCGCGCACCACCCTCAATCGCCATCGACTGGTGCACACGGACAAGATGCAGCACAAATGCGATTACTGTGGCAGGGAGTTTAAGCGTGCCAAGGCCCTCAAGAATCATCTCATCCTACACACAGGTCTGAAGCCGTACTCCTGTGATTTTTGCGATCGCACATTTGCCAATGGCTCAAATTGTCGCACGCACAAAAAGAAGTCACATCCCGAGGAGCTGGCCGCCCAGGAGGCGGCTGGCGGTGGCAAGGCATGCAATCGGAATATACCCAAACTAGAGGCGCTCAAAGCTTTCACAAAAAACAAGGATAATTTATCGCCTGTGGCCACCAAGCAGAGCGGTTGCTTTGCCTTCGGCAAGAAGCCCAAGCCGCAGATCAAAGAGGATATTAGTCCGCCTCCAGCAGAGCCGGTCGTCGAAGCCGAAACCGAAATGGAGCCTGAAGTCAAATCCCCAACAACGGCCATACCCACGATAGATACTATCTATAATCACATTATGATTGACTACCATTAA
Protein Sequence: MAAVPLTGHEGRATDWHLWCRLCAKDDVHGNINVFLKHEHTGGPGDGSGSDLALATAIGKYFWVDITRGEELPEMICTDCLTLVTTLVNFSERITRVQKLYCILQTTAKQEHVNLQELRSKFGLLEEEPETLTEVHYVEEKPKLGAQGDLLIEESTFDMKNPLIETADDQEEEPEEATSRSEENEPESDQEEEEPEPDQEEEYEEADEDAVLLKLCDAYGITEDNSSQDSHKCSRSTPPKQSKSKEDPDKAHQCTICTRAYARASTLNRHLRQDHDGMFESNLLACRECPKKFRTRYQLERHSQGHLPMPKRKVYPCASCDKMFTSNASAVQHAQYQHLDERPRPVICEQCGVRVTSISNLKVHVLTHTDDAPFECDVCKKCFKSASRLKHHKETHDPHKYICPECGMQLNSRTTLNRHRLVHTDKMQHKCDYCGREFKRAKALKNHLILHTGLKPYSCDFCDRTFANGSNCRTHKKKSHPEELAAQEAAGGGKACNRNIPKLEALKAFTKNKDNLSPVATKQSGCFAFGKKPKPQIKEDISPPPAEPVVEAETEMEPEVKSPTTAIPTIDTIYNHIMIDYH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00575031;
90% Identity: iTF_00517909;
80% Identity: -