Basic Information

Insect: Drosophila azteca
Gene Symbol: -
Assembly: GCA_005876895.1
Location: VCKU01000095.1:1184625-1186694[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.026 2.1 8.9 0.2 3 23 292 313 291 313 0.91

2 10 5.5e-05 0.0045 17.3 0.5 6 23 322 339 322 339 0.99

3 10 1.5e-05 0.0012 19.1 0.3 1 23 345 368 345 368 0.98

4 10 0.00012 0.0099 16.2 0.7 1 23 380 402 380 402 0.97

5 10 0.00084 0.069 13.5 7.1 1 23 409 432 409 432 0.96

6 10 3e-06 0.00024 21.3 2.4 1 23 438 460 438 460 0.97

7 10 0.031 2.5 8.6 0.7 2 23 469 490 468 490 0.97

8 10 0.00029 0.024 15.0 2.0 3 23 497 518 495 518 0.95

9 10 1.1e-06 9e-05 22.6 1.1 1 23 524 546 524 546 0.98

10 10 0.00015 0.012 15.9 4.4 1 23 552 575 552 575 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.026	2.1	8.9	0.2	3	23	292	313	291	313	0.91
2	10	5.5e-05	0.0045	17.3	0.5	6	23	322	339	322	339	0.99
3	10	1.5e-05	0.0012	19.1	0.3	1	23	345	368	345	368	0.98
4	10	0.00012	0.0099	16.2	0.7	1	23	380	402	380	402	0.97
5	10	0.00084	0.069	13.5	7.1	1	23	409	432	409	432	0.96
6	10	3e-06	0.00024	21.3	2.4	1	23	438	460	438	460	0.97
7	10	0.031	2.5	8.6	0.7	2	23	469	490	468	490	0.97
8	10	0.00029	0.024	15.0	2.0	3	23	497	518	495	518	0.95
9	10	1.1e-06	9e-05	22.6	1.1	1	23	524	546	524	546	0.98
10	10	0.00015	0.012	15.9	4.4	1	23	552	575	552	575	0.96

Sequence Information

Coding Sequence: ATGATTTGCAGGTTATGCCTGCGTAGCATAAATCCCAGTAATGCGGTATTCCTGTTCGAAACAAACGAGACATTGGCGGAGACAACTCTGGTCAAGATGATTGCCAAATTCCTGCAGTTGGAGATCACACCGGACGACAGCGTCTCGACGAGCGTCTGCACCGAGTGCTGTGAACATCTGGAGGACTTCAACAGCTTCTGGCAGCTGGTGGAACAGAAGCAGGGCACCCTCAAAAAGGAGTTCCTCACCGTCGACGTGGACTGCGTGGCTATGAAGTGGACTGGCGAGGTAGATGTGGACGTCAATATTGACGAGCCGCTGGTGGCAGTCGAAATGGACGAGAAGCCCCTCGATATGCACAACCTCAGTCTGCTGGGCAGTGTTCTGGATGTGAACGTGGACAGTGTAGAGGTGCCACAGGCGCCGCTTGGGGATATAAAAATTCAGCCAACTGATTACTTGTCCGAGGAAGATGAGCATCCATCCCATCTCCAGGCGACGGACAGTGACTTCGAATGTGAGCCAGTCCCCGAAGAAGACACCTCGGATGATGAACCACTGGTCAAGCTGCAGGACAAGCTGAAGCCCAAGCGCAAGTCCCAGCCCCGCACCACAAAGACACGGGAAAACACCTGCTCACTCGGAGCTCAGGAGCTTAATTATCTCCTTGGGCGGGGCGATGGTGACGGcgatggtggtggtgctggcgAATGCAGCAAAGGGCGTCGTAGAAAGGCGACTGGCCAGCGTATACCAACGGAGGTGCAGGAGAGCGAGCTGCAAGCAGCGCTCGAGCGCAAGCCAAAGGGCTGCTCGCGAGCCCAGCTGGCCAAGCGCTACGAGGAAGTCATTGCCAGCTACATGAACGCCGACTGCGATCTGTGCGATTTCAGCAGCAAGTATCTGTCCGAGCTGAAGGTGCACTTCCTGGAGGCGCACCAACGGGAGTTCTACATTAAATGCTGCAACAAGGTCTTCACACGCGCCTCCAAGCTGATGGACCACATACGCAAACATGTCAATCCCAAGCTCTTCACCTGCTCCATCTGCCAGAAGACGCTCAATTCGCAGGACTATCTGGCTACCCACATCGAGACGGTGCACAACAAGGTGGAAAAACTCGACAAGGTACTGCAGTTCCCCTGCTCCAAGTGCGAGCGCACCTTCAGCAGTGAGCGACGTCTGGCCAACCATCTCGCGAAGCACGACACGGCGACGCTGGAGCACATTTGCCACATATGCCATAAAAACTTTGCCAATGTCCATCGTCTGCGCCGACACATCCAGTCTATACACGAGGACCTGCACCGACATGTGTGTGACATCTGCGGCAAGAAGTTCAAGTTCAAGCCCTCGTTCGAGCGACATCTACGCGAGCATCAAGGCGTGGTGGCACCTGCGATGCAGTGCCCCATCTGCGGTGTCTGGCTGAAGAACGAGCACAGTCTGCGGCTGCACCGCTTCACCCACGACAGTACCAACACGGCCTGTCCCCATTGCGCAAAGACGTGCAACTCGAGAACAGCGCTGCGCGCCCACATTAAGTATGCCCACAAGCTGACGACCAGCTTCCAGTGCACGTACTGCGAGAAGACCTTCAAGCAGCAGCGCAACCTGGACGAGCATCTTGCCATCCACACTGGCCTTCAGCTGTACAACTGTCCGCACTGCCCCAAGGAGTGTCGCTCCCGGTCCAACATGTACGTGCACATCAAGCAGCGGCATGCGGAGGAGTGGCTCACCGCCAAAATGGCCCGTTCCCACAATCCGCAGTTCAAGCCGCACGCCTAA
Protein Sequence: MICRLCLRSINPSNAVFLFETNETLAETTLVKMIAKFLQLEITPDDSVSTSVCTECCEHLEDFNSFWQLVEQKQGTLKKEFLTVDVDCVAMKWTGEVDVDVNIDEPLVAVEMDEKPLDMHNLSLLGSVLDVNVDSVEVPQAPLGDIKIQPTDYLSEEDEHPSHLQATDSDFECEPVPEEDTSDDEPLVKLQDKLKPKRKSQPRTTKTRENTCSLGAQELNYLLGRGDGDGDGGGAGECSKGRRRKATGQRIPTEVQESELQAALERKPKGCSRAQLAKRYEEVIASYMNADCDLCDFSSKYLSELKVHFLEAHQREFYIKCCNKVFTRASKLMDHIRKHVNPKLFTCSICQKTLNSQDYLATHIETVHNKVEKLDKVLQFPCSKCERTFSSERRLANHLAKHDTATLEHICHICHKNFANVHRLRRHIQSIHEDLHRHVCDICGKKFKFKPSFERHLREHQGVVAPAMQCPICGVWLKNEHSLRLHRFTHDSTNTACPHCAKTCNSRTALRAHIKYAHKLTTSFQCTYCEKTFKQQRNLDEHLAIHTGLQLYNCPHCPKECRSRSNMYVHIKQRHAEEWLTAKMARSHNPQFKPHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00474705;
90% Identity: iTF_00580951;
80% Identity: -