Basic Information

Gene Symbol
-
Assembly
GCA_005876895.1
Location
VCKU01000003.1:7301976-7304333[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 7.6e-09 9e-06 25.6 0.0 1 38 233 271 233 275 0.96
2 4 4.7e-09 5.6e-06 26.3 0.1 1 42 288 333 288 337 0.89
3 4 4.5e-06 0.0054 16.7 0.0 2 46 344 389 343 389 0.93
4 4 3.1e-10 3.6e-07 30.1 0.0 2 43 396 438 395 441 0.95

Sequence Information

Coding Sequence
ATGGATGTCGAGAACCTATTAAATCTGAATCCCAATCAACTGCTGGCAGAGATCACATCGCTGCTGGTAGCCACCTCAGAGACCAGCGAGTCTAATGCCCTGGTGCTCAACCAGGAGCTGCAACGACGTCTGCAGCAAGTGCGCGCTAAAGTTCTCGCACTGTTGAAATCCGTCCGGGCTCGATATGCACGGAATGAAGAGATTTTAATACGCCGCCTAAAACCGCGCAGTCACTGTCATAGTAGGCCTTCTAAGGGAAACACTGAAGTGTATGGAATATGTGGAGCGATCCGCCGTGGAGCCACCTTCCACTTTAAGGGAAATTTGTATTTTCGAGACATTGATGGACGCAGTTGTCCGAATAATGAGGACTACGAGGCGCGTAGTCACACTGAGATGTTTCCCTCGGACTTCGATATGTGCTCCAAACATGTGTGGACTCTTCTGGACAAGAAGAACTTGATTATGGGCATAAAGCAACAGCTGCTGGACCATGCGGCCTGTGAAAAGCCTGTAAACTCTGTCAAGCAAAAACCCATCGAGCGACATGTTCGCTCTCTGGTCAGTCTGCTGGCTAACGCCGACAGCAGCTTTAGCATCGACTGGACCCAGATCAGTACACTGGACCTGGAGTTCCGTCATTCAACCTATAGCTGTGAGGCAATGTGGCGGGTTTATCTACATCCGCAGCTGAGCCGTGAGGACTGGAGTGTGTCGGAGGACGAAGCTCTGGTGGCGGCGGCCAAAGCGAATCACATGCAGAACTGGGAGAAGATAGCTTCGGCGTTGGAGCGGCGATCGGACTATCAGTGTTTCGTGCGTGTTCTAATGGCGTTCCGTCAACAGCTGGAGCCATCCTCCCGTGTTCGGTGGACTGAGAAGGACAGTGAGACACTAAAGCGTCTTGTCGAAAAGAATACTGTGAATGGCCAGACCAATTGGCAGCTGGTGTCGGAACACTTTCCTGGCAGGTCCAAGTCCACTCTGATCGGACGTTATACGTACACGCTACATCCAAGCATCAGCCATGAACCCTTCACCACCAAGGAGGACATTATGCTCTTTGCTGCCGTAGAGGAGTTCAATGGTAAATTCCAAAGCTTTCCCCGCACTCTGTTTCCCAACCGTTCGCTGGCACAGCTCCGCACGCGATATCACAATGTTCTCGCCCAACGCAACAAGACCGACCCCTGGTCGGTGCAGGACGATACCAAACTGATGAATTTTGTCACGGAGCACGGGGCCGCTCAGTGGCTGAACTGTGCTGCGCATCTTGGGAATCACACGCGGACCAGTTGCAGGACACGCTTCTTGGTAATAAAACGGTTCCTAGAGCAGAATCCCTCTGCCACGGTTGCAGACTTTCCGCGCCGAAGATGTGTTAAGAATAAAAATAATATCGTCACGGCTGAAAATTGGGCGGAGTGTCTGGAAGAGTGGCAGCAGGATCCCAACTCCATCGATCCGTCGAAGCAACTAATGCCTGCACCGAGTGAAGCAGGGAGAAGGAGCTCCAACAGCGGGGCCAGTGAAATAGATTTGCAGATCTATGAGTACTTCAAGTATAGCTACGATCTCCAGCTGAGGTCATCACCGTCGGTGAAACACTATTCGATGCCCAAGGATGCCTTGAATCTTGCCTATGTGGTCGAGGCCTTAAACTACAAGCCACCAGCGGCAAAGAGCCTGAAGCCCATTCAGATCGCTTCAATGCCGCTGCAATTAAGTATGTACTACAACCAAATGATAAAGACGCTGCCAAAGAAGAAGGACAAAAAGCCATCACAGGATTCGCTACTACTGCCCCCCAACTGGTCAACGATGATGGGATTCCGTGCCATTTGCATATTATCCGGCGACAGTGCAAAGCTCTCCTCCGCCGAGCCGCCAACCTACGATGAGTCCTCGCCGCACATCCAGCAGTTCCGACAGCGACTGCGAGCCCTGTTTTATCGAACCGTTCTGCTGAGCCGACTCGAAACGAATCGCTTCGAAGAGTTGCCCGCGCACCTGGTGGCCTTGCCACGACCTATGGCAAACTTCATAGAATCCGGAACAACACCGAAGCCGGACGAACTGAGCAGACAAATTGCGGCCAAGCAAATTGCACATGTCGACAGCTTAGTTGAGCCACAGAGTAAGAAACCGAAACTGGAGCCACTCTGCGAGGATGACATGATGAGCTTCAAGGAGGAGGATGAGTTCTTGCCTTTATAA
Protein Sequence
MDVENLLNLNPNQLLAEITSLLVATSETSESNALVLNQELQRRLQQVRAKVLALLKSVRARYARNEEILIRRLKPRSHCHSRPSKGNTEVYGICGAIRRGATFHFKGNLYFRDIDGRSCPNNEDYEARSHTEMFPSDFDMCSKHVWTLLDKKNLIMGIKQQLLDHAACEKPVNSVKQKPIERHVRSLVSLLANADSSFSIDWTQISTLDLEFRHSTYSCEAMWRVYLHPQLSREDWSVSEDEALVAAAKANHMQNWEKIASALERRSDYQCFVRVLMAFRQQLEPSSRVRWTEKDSETLKRLVEKNTVNGQTNWQLVSEHFPGRSKSTLIGRYTYTLHPSISHEPFTTKEDIMLFAAVEEFNGKFQSFPRTLFPNRSLAQLRTRYHNVLAQRNKTDPWSVQDDTKLMNFVTEHGAAQWLNCAAHLGNHTRTSCRTRFLVIKRFLEQNPSATVADFPRRRCVKNKNNIVTAENWAECLEEWQQDPNSIDPSKQLMPAPSEAGRRSSNSGASEIDLQIYEYFKYSYDLQLRSSPSVKHYSMPKDALNLAYVVEALNYKPPAAKSLKPIQIASMPLQLSMYYNQMIKTLPKKKDKKPSQDSLLLPPNWSTMMGFRAICILSGDSAKLSSAEPPTYDESSPHIQQFRQRLRALFYRTVLLSRLETNRFEELPAHLVALPRPMANFIESGTTPKPDELSRQIAAKQIAHVDSLVEPQSKKPKLEPLCEDDMMSFKEEDEFLPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00474432;
90% Identity
-
80% Identity
-