Basic Information

Gene Symbol
gt
Assembly
GCA_005876895.1
Location
VCKU01000012.1:7858603-7860164[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.29 2.8e+02 1.5 3.0 25 47 57 79 50 94 0.66
2 2 1.4e-12 1.3e-09 37.8 5.3 5 62 432 489 428 491 0.93

Sequence Information

Coding Sequence
ATGCTGATGCACGAGAAACTCATGTCCGGACAGTTCTTCAACGATCTGAAGACCGATCGCAAGCCTCTGctgcaccaccaccaccatcaccagTACCACAACCACCATCATCACCACCAGCAGCCGTCGCCGCAGCAGCCACATCAtcaccatcagcagcagcagcatctgcagcaacagcatctgcatctgcagcACAGCcaattgcagcagcagcagcagagcctGGCCCTGCCCAAAATGGATCTCTACACCGCCTACGCCTATCAGCAGCAGCTCCTTGGCGCTGCCCTcagccaacagcagcaccaacaacagcaacagcagcagcagcaaatgcaGCAGGCAACAGTTGAAGGAGCTGCCTCCGCCGAGGTCCTCGATCTGTCACGCCGCTGCGACAGCGTGGAGACGCCCCGGAAGACTCCCTCGCCCTACCAGACCAACTACAGCTACGGCAGCGGTTCACCCTCGGCCTCACCCACTGCCACGGGCTCCgtctccggctccagctccatccCAAGCAGCCTCCTGTACTCCgtccaacagcagcaacagcagctggcCAGCCTCTATCCGGCCTTTTACTACAGCAACATCAAGCAGGAGCCGTCCGCCCCGAAGGTCACGCCTAATCCCAgcgccagtgccagtgccacgGCCACCGCCAGCCTGCTGCAGACCTTCGCTGCAGCCTCGGCGGCTGCCGCCGCTGCAGCTGTGGGGGTTTCTCCACGCCCGGCCAGCAATGCCAGCACCATGCAGATCGATGTCTTGGAGACGCCACAATCGCCGCCCGCGGCCCAGGccaccaacaacagcagcagcagcaccgccGCCACCACGCCCACCAGTAGCACCGTAGCGAACAGCGCCTCCGACACGGGCAAAAGCACACGCCCCTTCAAGGCGTTCCCCCGCGACCCACTGGTGATTGCCGCCAACTTTGCGGCCACCGATGTGCTGCTAGACAATCCGCGCGTCGAGCGCTACACCGAGTACCGGAAGCGGGTGCTTGAGCAGATCCGCAGCTCGAACGGAGGCTCCCGCACCGTGACGAACCCCAAAATGCGTCGCACCAACTCCCGCAGTGGCAGCGTCAATGAGGGCAGCTCCTCGAACAACAACAGCGAGAGCGAGGATCGCGCGGCCGCCGAGGAATCGAGCGATTGCGACTCGCATGCCGGCAACTTTGAGTCCAAGTCCACCACCGGCTCCCACTCGAACGGCAGCACCTCCGGGGCCAATGCCAGCTTCCAGCCGTCCAGTGGCGGACAGGTGAAGGATGCCGCCTACTACGAGCGGCGTCGCAAGAACAACGCGGCGGCCAAGAAGTCGCGCGACCGTCGCCGCATCAAGGAGGACGAGATTGCCATCCGTGCCGCCTATCTGGAGCGCCAGAACATCGAGCTGCTCTGCCAGATTGATGCGCTCAAGGCGCAGCTGGCCGCGTTCACGGCCAAGGTGGCCACTGCCTAA
Protein Sequence
MLMHEKLMSGQFFNDLKTDRKPLLHHHHHHQYHNHHHHHQQPSPQQPHHHHQQQQHLQQQHLHLQHSQLQQQQQSLALPKMDLYTAYAYQQQLLGAALSQQQHQQQQQQQQQMQQATVEGAASAEVLDLSRRCDSVETPRKTPSPYQTNYSYGSGSPSASPTATGSVSGSSSIPSSLLYSVQQQQQQLASLYPAFYYSNIKQEPSAPKVTPNPSASASATATASLLQTFAAASAAAAAAAVGVSPRPASNASTMQIDVLETPQSPPAAQATNNSSSSTAATTPTSSTVANSASDTGKSTRPFKAFPRDPLVIAANFAATDVLLDNPRVERYTEYRKRVLEQIRSSNGGSRTVTNPKMRRTNSRSGSVNEGSSSNNNSESEDRAAAEESSDCDSHAGNFESKSTTGSHSNGSTSGANASFQPSSGGQVKDAAYYERRRKNNAAAKKSRDRRRIKEDEIAIRAAYLERQNIELLCQIDALKAQLAAFTAKVATA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00600813;
90% Identity
iTF_00471364;
80% Identity
-