Basic Information

Gene Symbol
Xbp1
Assembly
GCA_005876895.1
Location
VCKU01000094.1:20663445-20664461[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-15 2.1e-12 46.8 11.6 2 58 84 140 84 142 0.94
2 2 5.7e-05 0.056 13.3 11.0 26 64 122 160 121 168 0.88

Sequence Information

Coding Sequence
ATGGCACTGACCGCGAATGCCTATTTGATTAAAGTGGACACACCGGTGGCCATATCAACGCATACGTTGCCCAAGCTGCGGCCCGCACCCCTGACAGCGGCTCTGCTCAAGGGGGCGGCGGCCTCGCCCACACGCTCGAGCTCGGGATACGCCTCGTCCTCGTACGATAACGTGGAGATGGAGGAGGAAGAGTCTCTGGTGGCTTCGGCACCCAAGGCCAAGAAGCGTCGCCTGGATCACCTCACTTGGGAGGAAAAAGTACAGAGAAAGAAGCTAAAAAATCGCGTTGCAGCCCAAACATCGCGCGACCGCAAGAAGGCTCGCATGGAGGAAATGGAGTACGAGATCAAGGAGCTAACTGACAAAACGGAATTACTACAAAACAAATGCGAAAGTCTACAGTCCATCAATGAGTCGTTGCTGGCCAAAAACCAGAAGCTGGACACTGAAGTAGAACTATTGCGTCAGGAACTTGAAGAGatgaaacaacaacagaagcaacaacaacagcagcagaacgCCAAAAACATCACCTGCAACAGCTCCAATGCCAACATAGGCGCTGAGGGCTGTGCGTCCACAATCCTTGGATCCGCAGCATCCAATGCTGACCCTCTGCAGCAGGGTACACTAGTGGACACACAGTCGTCAGCGCGTCTGTTGGCGGAACAGCTGAAAAGCAGCAAGACCATGGCATCGCTCTGGAAGGTTGTGGCTCTCTGCCTACTCTACAAGACATGCTGCTCGTCGACGATGAAGAGTTCGACGCGCGGCGACTTGAAGAACTGGCCGAAAGTCTGCTCGCAGATATCACAGCAGACCTGGAAGCTGGCCCTGGAGCGTGCGGCCCAACTGCTGCCAAAGATTCAGGCGACCAAGAGCGATTGCTTGGATCAATGGTGGGGACCCCAACAGAGTGCCTGGAATCCGGCGGGCATAGAGCTGATGGCCTAG
Protein Sequence
MALTANAYLIKVDTPVAISTHTLPKLRPAPLTAALLKGAAASPTRSSSGYASSSYDNVEMEEEESLVASAPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTELLQNKCESLQSINESLLAKNQKLDTEVELLRQELEEMKQQQKQQQQQQNAKNITCNSSNANIGAEGCASTILGSAASNADPLQQGTLVDTQSSARLLAEQLKSSKTMASLWKVVALCLLYKTCCSSTMKSSTRGDLKNWPKVCSQISQQTWKLALERAAQLLPKIQATKSDCLDQWWGPQQSAWNPAGIELMA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480628;
90% Identity
iTF_00603097;
80% Identity
-