Daus022780.1
Basic Information
- Insect
- Drosophila austrosaltans
- Gene Symbol
- -
- Assembly
- GCA_035045865.1
- Location
- JAWNOQ010000207.1:1736794-1741245[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0057 0.64 11.3 0.7 3 23 303 324 301 324 0.95 2 10 0.014 1.6 10.0 4.6 2 23 469 491 469 491 0.91 3 10 0.0065 0.73 11.1 2.3 3 23 569 590 567 590 0.94 4 10 0.4 45 5.5 2.5 1 19 709 727 709 732 0.93 5 10 0.00023 0.026 15.7 0.2 2 23 847 869 846 869 0.96 6 10 0.2 23 6.4 0.1 2 23 924 946 923 946 0.90 7 10 0.011 1.3 10.4 3.6 2 23 991 1013 990 1013 0.96 8 10 0.11 12 7.2 4.2 2 23 1027 1049 1026 1049 0.92 9 10 0.012 1.3 10.3 0.4 3 23 1128 1149 1127 1149 0.95 10 10 0.035 3.9 8.8 0.7 1 23 1249 1271 1249 1271 0.99
Sequence Information
- Coding Sequence
- ATGGCTGCTTCTATATATGCCACCCCACCGCCAGATCTGAGCAGCGAGGACACTGCTCTTTCCGATGTTTCCAATTCATCGACACTTAACACAAATCgtggcagtagcagcaacagcaacaacaacaacaacagcaataccaataataataataacaacaacaacagtagtactacaacaagaacaacacaGGAAGCCGCAGCAAGCAGAGaaacagtagcagcagccacaacaccaacaacaggaGCGAGAGAAGAAGGAGAGACTAGAAGAGAAGACGGAGCCATGTCACCcaaccaacaccaacagcaactgcaacagcagcagcaacaactggaTAAAGAGACGGAAACAGAGCTGGAAGAGTCAAAAGTCACAGCGGGAAGCAACACAAATGAGTCGGACGATGGCGACAATGAAACGGGAGCTACTGGTCAGCAGGAGGCCAACGCCATGGCGGCAATGGCAGTGGCAGCCAATGCAGCAGCCATGCAGCTGCAACTGCTGGAAGCCCTCAATGATGCGGCCAAAAAGCGACGCAAGCAACACAATCCCAGTCGTCTGGACGCATTGAATTTGAGTGGCGAAACAATGGATGAGAATAATGGTGGTGGTGCAGTCGGCATGGATGGAATAGTAGATGGTGGCGAGGACTATGAGGAGAAGTTGTCGAAAATGTTTCTGCCCAAGTCCATAGAACAGTTGAAAGAGACATTCGAACTGTTGCAACatcagcaaaagcaacagcagcagcaacaacttgaCGATGAACAGGAACAAGACCAAGAACAGGATCAGGACCAGGATCAGGACCAAGAGCAAGGCCAAGACCAGGAGCCAGACATATCACAATCTCAGGCAGAGGCCAAAAAAGAACAGGCCATGCAGAATCCGTATCAGACATTCTGCAAGCAATGTGGCGAGAATTTCGAAACGGAATTCAAGCTGAGTCTACACATGCTGCAAGATCATGGCAACCAGGATCAAGATGGCGGAGAAGGTGGCATGGTGGAGCCCATGGATTTTCTGGCCTCCATAAAAGTGAAACTCGAACGAGATGACAGTCCGCAACacaatcatcatcagcagcagcagcaacagcaacagcagcatcaacaacagctACATCCTTCGGATCTAACCAATGGGCATGCCAAGGAGCAGGAACTTTGGTTCAATGCCATGTCCCAGCAGGCGGGACATGGTGGTGCTAGTGGTGTTGGTGGACTACCTCCAGGTTTTCCATTCCCTCCAgaggcagctgctgctgccgcattGGGAGTCGGTGTGGGTGTTGGTGTCGGCGTGGGTCCCGGTGGCTATCTTCCCCTATTGGGCATGCCCGGATTTCCCGGTGTCGATGGCTTAAATCGTCCGCCATTGCGCATCTTTAATCCGGAGGCCTATTGCGAGCTCTGCAACAAGGAGTTTtgcaacaaatattttcttaaaaccCACAAGGCCAACAAACATGGCATCTTTGATCCTGTGGGTGATGCCATCTCCACTCCCACCAccattaacaataacaacaacaataataacaacagcacCAATACCATTAACAACAATAGCGGCAATCCATCATCTCTAATGTTTCAATTGCCACCACGCGACACAGTAGTAGCTCAAATTCCGCCGCCCATTTTGAAGCCAGAGCAACAAGCTCCATCTGCCCCAGTCCCGCCGCCAGCTTCGGTACACTGCGATATTTGTTCAAAACGATTCACCAATGTCTTTGCCATGCGTCGTCATCGGGCGAAGCAGCATGATCAGCAGCAGGTTACTCCACCGGATTCTACACCAGGCGGTGGTCCAGCTACACCACAATCTCAAAGAGATAGCCCAAACGATcctcagcaacagcaacagcagcaacagcaacagcaacagcaacagcagcagcagcagcaacaacaacaacagcatctcATTAAGCAAGAGGAATCGGAAATGAAACCCCTTAAATTGCCCGATGGCTTTCGTGAGGATTTCTCTCTCGAGCAGGAGGATATGAGTTTCGCACCAGCGCCAAGAAGAATGTCCTCCCATTTGCAACAACAGGCTCGTGATTCCAACTTTAATCCGGATAAATTACGTCGCTTGGGTGTCCAGTTTCCCGAATTCTTTTGCGAAATCTGCTTTAAGGAGTATGGCAATCGTTACTTTTTGCGCACTCACAAATGGAAACGTCATGGAGTCTTTGTGCCACCTGAGGAAGCTGCAATTGTTACTGGCAAAGATGTGGAGCCACTACCGCCGCAAATCAACTCTTGGCCCTTTATGCCGCTCAATCTAATGCTGGccaaggcagcagcagcagccagttTAGAGCAGAACGAAATGATGGAACCTGAAAAGGATTTAGACCAGGAACAACCCAGCAAACGCATTAAATTGGAGCCACTTAGCGATAGCTATGATGATGAGAAACCAAATGGTGGCCCTGCTGCCGGCTCTGTTGTTGGTCTCCAGAATCTGCAAAAACTTCAGTCCATGCTGCAACAGCTCAATGATTTCAATGGCAAACGTCCACTGCCCTGTCACCTTTGCGGACGAGAACTGGAGAATCAATATGCTCTGAGGGCACATCTGATGACCGAACATGCGGGACAAATGCAACTGCCGTTGCCTTTGACACAAATGCCTCTTGGGGAGCCGCATCAACTGCATCAGGCCATGTATCAGGCATTACCCAAGCTGTCGCCGGGTGGCACTGGAGATGCTGGCACCACCGCCGGTAATGGACCATCGCCAACCAATGAATTGCGTTGTCAGCCCTGCGAAAGAGATTTCCCCAGCCCACAGGAATTCAAGCAACATATCGCCGAAATGCATTTAAGTCGTTCGGGATCCCTAATGGCCAGTGGCGAGGGCTTCTTTACTCCCGAGCGGCCTGTCGCGCCAGCTGGCGGTGTCAATGCGGCGCCAGCTAATCGACCAGCGTATACCATAACCCCCACCAGCAGCTACTGTGAGATCTGCAACAAGGAGTTGTGCAACAAGTACTTCATGAAAACCCACATGCAACGAATGCACGGCATTGAAATCGAGAATGGGGCTCAGATTGGGGGAGTTGTGTGCAACATTTGTAACAAGGAGTTGTGCAGCAAATATTTCCTCCGTGTGCATAAACATAATACGCATGGCATTGTTGAGGAGGGATCCCCATTGCCCCAGCCACGTGGTCAGAATGGTGTAAAATTggaggcggcagcagcagcacagcagcagcaacagcaacagcagcagcagcagcagcaacaacaacagcagcagcaacagcagcagctttTAGAACAAGAACTTAATCTCTCTCCACCCACAACAATTGGCGGCGATGGAGGAGCTCCAAACTCATCAGGTGTGGCCAATGAGATTTGTCCCTTGTGTGCACGACAATTCCGTAGCTTTAAATGGCTACGATCCCATCTGATGAACGAACATGGCCCAGCTGGACTTGAAAAACTTCGCGATTTGGAGCAAATGCAAAGCTCAGTGCCATCTTTGGCCATTTCGTCGGCATCGACCAATTCCAAGCCAAATAGCCCCACGCTCAAGATACCCAATGGGCATGCTGCCCAGGCACCAGCAGGAGCAGCTGCACCAAATCTGGCTCAGGCCTTGCAGAATCTGAATGCCCAGCATTTGTTTGGACAAATGCAACAGCAATTGCCCAAGGGATTGCCAATAACAGGGCTACCCAGTATGTTTGGTGAACAGCCATCGACACGCTTCAAGGAATACCAATGCTCCATGTGTCCATTTACCACACCCTACTATGCTTTCCTATTCATCCACGAACGTTCGCATGCCTTGCTCAATAATGGCGGCGGGGAGACTGCTGAGAATAATCCTCCGACACCAACGGAAGCCACAAAATCAATAACAAATCCCACAAAGTCCAGGAGTAAATCGACAAAAGCTTTAGCTAATGCCCAGATAACAAGCGATATGGATCATGTGGAGCCCACCAATCTGAGCATAACCAATCCACAAAAGGCAACTTTAATCGCATCGCCTATACCATCGCCCAAGGCCCTCAATCAAAATTCTAGATCGCCCAAAATCCGATCTGCCCCATCTTCGACACCCAATTCTCCACCCAAAGGTAATACACCCAATGGTCTAGTCCTGGCAACAgtagcggcagcggcagcagcggcgTCTGCAACGgcgtcagcaacagcaacagcaacagcaacaagtaATCAACGCTCAGCAGCCACTTCCCCCTTTGAGGATTGCAGTCAGCTggccaatggcaatggcaaaccCGTGAGCTATGCCCAGCCCGAGAAGACAGAGGAAGCATATCAAATGCAGGCCTTTCATCTGCAACCAGTCGATACCGAAGCTGAAATCCGTTATGCCCCAGCCCTGGTCTATTTACCTGTGCGCGGGCGTGCAACAGAATCGGCCGTCATTAGCTTTAGGTTAACGCCGGCCTAA
- Protein Sequence
- MAASIYATPPPDLSSEDTALSDVSNSSTLNTNRGSSSNSNNNNNSNTNNNNNNNNSSTTTRTTQEAAASRETVAAATTPTTGAREEGETRREDGAMSPNQHQQQLQQQQQQLDKETETELEESKVTAGSNTNESDDGDNETGATGQQEANAMAAMAVAANAAAMQLQLLEALNDAAKKRRKQHNPSRLDALNLSGETMDENNGGGAVGMDGIVDGGEDYEEKLSKMFLPKSIEQLKETFELLQHQQKQQQQQQLDDEQEQDQEQDQDQDQDQEQGQDQEPDISQSQAEAKKEQAMQNPYQTFCKQCGENFETEFKLSLHMLQDHGNQDQDGGEGGMVEPMDFLASIKVKLERDDSPQHNHHQQQQQQQQQHQQQLHPSDLTNGHAKEQELWFNAMSQQAGHGGASGVGGLPPGFPFPPEAAAAAALGVGVGVGVGVGPGGYLPLLGMPGFPGVDGLNRPPLRIFNPEAYCELCNKEFCNKYFLKTHKANKHGIFDPVGDAISTPTTINNNNNNNNNSTNTINNNSGNPSSLMFQLPPRDTVVAQIPPPILKPEQQAPSAPVPPPASVHCDICSKRFTNVFAMRRHRAKQHDQQQVTPPDSTPGGGPATPQSQRDSPNDPQQQQQQQQQQQQQQQQQQQQQQQHLIKQEESEMKPLKLPDGFREDFSLEQEDMSFAPAPRRMSSHLQQQARDSNFNPDKLRRLGVQFPEFFCEICFKEYGNRYFLRTHKWKRHGVFVPPEEAAIVTGKDVEPLPPQINSWPFMPLNLMLAKAAAAASLEQNEMMEPEKDLDQEQPSKRIKLEPLSDSYDDEKPNGGPAAGSVVGLQNLQKLQSMLQQLNDFNGKRPLPCHLCGRELENQYALRAHLMTEHAGQMQLPLPLTQMPLGEPHQLHQAMYQALPKLSPGGTGDAGTTAGNGPSPTNELRCQPCERDFPSPQEFKQHIAEMHLSRSGSLMASGEGFFTPERPVAPAGGVNAAPANRPAYTITPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCNICNKELCSKYFLRVHKHNTHGIVEEGSPLPQPRGQNGVKLEAAAAAQQQQQQQQQQQQQQQQQQQQQQLLEQELNLSPPTTIGGDGGAPNSSGVANEICPLCARQFRSFKWLRSHLMNEHGPAGLEKLRDLEQMQSSVPSLAISSASTNSKPNSPTLKIPNGHAAQAPAGAAAPNLAQALQNLNAQHLFGQMQQQLPKGLPITGLPSMFGEQPSTRFKEYQCSMCPFTTPYYAFLFIHERSHALLNNGGGETAENNPPTPTEATKSITNPTKSRSKSTKALANAQITSDMDHVEPTNLSITNPQKATLIASPIPSPKALNQNSRSPKIRSAPSSTPNSPPKGNTPNGLVLATVAAAAAAASATASATATATATSNQRSAATSPFEDCSQLANGNGKPVSYAQPEKTEEAYQMQAFHLQPVDTEAEIRYAPALVYLPVRGRATESAVISFRLTPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501398;
- 90% Identity
- iTF_00501398;
- 80% Identity
- -