Basic Information

Insect: Drosophila austrosaltans
Gene Symbol: -
Assembly: GCA_035045865.1
Location: JAWNOQ010000083.1:4009681-4012949[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.3 33 5.9 0.4 1 23 77 99 77 99 0.91

2 8 0.0015 0.17 13.1 1.3 1 23 135 157 135 157 0.97

3 8 0.16 18 6.7 2.9 1 21 163 183 163 184 0.95

4 8 0.0032 0.36 12.1 0.1 2 23 510 532 509 532 0.93

5 8 1.4e-05 0.0016 19.5 1.2 1 23 616 638 616 638 0.97

6 8 7.1e-06 0.0008 20.4 4.2 1 23 644 666 644 666 0.99

7 8 0.0002 0.023 15.8 2.9 1 23 672 694 672 694 0.98

8 8 0.00065 0.073 14.3 0.1 1 21 700 720 700 721 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.3	33	5.9	0.4	1	23	77	99	77	99	0.91
2	8	0.0015	0.17	13.1	1.3	1	23	135	157	135	157	0.97
3	8	0.16	18	6.7	2.9	1	21	163	183	163	184	0.95
4	8	0.0032	0.36	12.1	0.1	2	23	510	532	509	532	0.93
5	8	1.4e-05	0.0016	19.5	1.2	1	23	616	638	616	638	0.97
6	8	7.1e-06	0.0008	20.4	4.2	1	23	644	666	644	666	0.99
7	8	0.0002	0.023	15.8	2.9	1	23	672	694	672	694	0.98
8	8	0.00065	0.073	14.3	0.1	1	21	700	720	700	721	0.96

Sequence Information

Coding Sequence: atggCCATTGCTAATGCAAGGATCAAACAGGAGGTGGATGACGACATAGACTTTGAGCTAAACAATGGTAAATTAACAAATGCGTTATCTTCGCtgAAAATCCTAAATGAAGGTTCAAATATGATTACTGTTGTCGCTAACGATCACAAATCCGAggatgaaagaaaatttattgataGCTTAGCAACCATTGATCCTGATCAGTTATTTGCTGAATCATCGATAAATTATCTATGCAAATTTTGCCCAGCATCATTTGGTAATCATATGGAATTTGGTGCACACTTGGTGCTCCATCAAATGAATCGTCATATTTGTCGTTTCGGCTGCTTGTACTGGTGCGAGTCCTTGGAGCAAATTCTCGAACATGAATATCAAAAACATTCCCAGGGGTTGAAGAAGTTTTGTTGCAGggTCTGCGATTGCATCGTTCCCAATGCCGATGCCCTTACAAAACATATGCTTAGCCATGTCCATGGTAAACGTTATGTTTGCGCCTTATGCCGCAGACATTTTGATTCCCATCAGGGTTTGCAATTGCATCGCAAGCATACTAAAGAAATTTGTGGTCAAGTGAAATACATAAATGGTGACTCTGATAGAATAGAATTGGTGGCGACATCTGAAAAATGCCAACTACCGGCTGAATTGTTATGTGATGTACAAATCAAAGAGGAGCCCAAAGATGAAGAGATTATGAAATTGGaacatgaaattttaattaaagaagaGCCCTTGGATGCGAAGGATGAGGAGGAGAAGGAACAGGAAGACGAATCTCTGCAGGTAACTGCAAGTATTAAACCAAACTTGGCTTTGGATTGGCGCAGCAAATTGCGTTTGCCAGCCTTAAAACGTAAACCGGAAACGCCGACACCTCCTCAATCAAGCTTAAAAATCGCTAAATTAAATGATCAACCAACCTCAAACGCTGCCATacttaaaaaaccaaatattttaaagaggGATCCAAATCCGGATACCATTACAACTAAGAAATCCAACATAcctgaaaatatattaaaaattttgcccAATAACTGCATGGTCATCAAATTGCCTCCAAAtacgaaaattttaaaattacccAATGAAATGAATAAGGCACCGACAAATCATTCCCGTCCACCATCTCCTGGCATTGTTCAAATAACTCAGGTCACTAAGCAACTTAGTCCAGTCAACAAAAATCCCACCTTTGCCCCAAACAGTATACCGTTGTCGCCGCCAAAAACCAATCGATTGGGCAGCTTTCATCACGAAGCATTTTATGAACTCGAGAGTCGTCCGGAGTCCAAAAAAATGATtgaagaaattcaaaatcaaattcgTAGCATTGAAAGTACATTGCCCCTACCTGGAAGCGTATTGCAAACGAAATCGAGGAAAACTCTTACTGTGGGCATTAACATATGTCAGCCGGAAGTTAAGGATGAACCAGCTAAATTGGAATTATTGCTAAATTCAATGTGCACCAATATGTGGAAAActctttttgaaaaatatcgcAATTATCGTTTCTATTGGGTCTGTCCCATCTGTGGCGATGATTTTGAGCAACCCCAAGCACTGCGACATCATTTAAGCTGGACGCATGTCATTGAAGGTGAAAAATTGGATACTTTGAAGGTTACACTATTGCCCAAAAAAGTACTTTTCGGGGAGCAAATTAAGGCAGAACAAATAAAGGCACCAACTAAGGATTTGACAGAGAAAACTTCAGCGGTTCCTCAAGTATCAGCGGATCCAACAATTGCTAAAATCAGTGAAAAGACACAAGATGAACCCCAAACTCCTAAAAGTCCAATtgtgccaaaaacaaaaggaactGGTGGACAGCAACAACACGAATGCAACGAGTGTTCCAAAACGTATACCACATCTGGAGCTTTGAGAGTCCACAAGATGATTCATACGGGTGAATTGCCATATAAGTGTAACTTTTGTGACAAACGTTTTCGCACACCAGGCCAGGTTAAAGTTCATCATCGTAGGCATACGGGAGAAAAGCCTTTCAAGTGCAAGATCTGCTCTTTGGACTTTACACATCGGGAGACTCTTATTTCCCACTTGTCCCGCCATATCGGAATGAAGCGCTATAAATGCTACGGATGTGACAAGTACTTTGTGGTTGTCAGTGGACTGCGGGCGCATCGTCGTCTTCGGCCGGATACATGTGGCAAGGTGAAGTTTACAGCTCGGGCACATGGACCGAGAGTGCGTGTAATTAAAGGCGAGGTGATATTCGAAGGGCATCCCGAGCACAACGGCTACTTGCGTAGCGAGGATCCTTTGAACATTCTGTCGGAAAGGAATCAAATTGATACAATTACAAATTCAAACGAAGCGGCGGCCAAAGGCGTTTAA
Protein Sequence: MAIANARIKQEVDDDIDFELNNGKLTNALSSLKILNEGSNMITVVANDHKSEDERKFIDSLATIDPDQLFAESSINYLCKFCPASFGNHMEFGAHLVLHQMNRHICRFGCLYWCESLEQILEHEYQKHSQGLKKFCCRVCDCIVPNADALTKHMLSHVHGKRYVCALCRRHFDSHQGLQLHRKHTKEICGQVKYINGDSDRIELVATSEKCQLPAELLCDVQIKEEPKDEEIMKLEHEILIKEEPLDAKDEEEKEQEDESLQVTASIKPNLALDWRSKLRLPALKRKPETPTPPQSSLKIAKLNDQPTSNAAILKKPNILKRDPNPDTITTKKSNIPENILKILPNNCMVIKLPPNTKILKLPNEMNKAPTNHSRPPSPGIVQITQVTKQLSPVNKNPTFAPNSIPLSPPKTNRLGSFHHEAFYELESRPESKKMIEEIQNQIRSIESTLPLPGSVLQTKSRKTLTVGINICQPEVKDEPAKLELLLNSMCTNMWKTLFEKYRNYRFYWVCPICGDDFEQPQALRHHLSWTHVIEGEKLDTLKVTLLPKKVLFGEQIKAEQIKAPTKDLTEKTSAVPQVSADPTIAKISEKTQDEPQTPKSPIVPKTKGTGGQQQHECNECSKTYTTSGALRVHKMIHTGELPYKCNFCDKRFRTPGQVKVHHRRHTGEKPFKCKICSLDFTHRETLISHLSRHIGMKRYKCYGCDKYFVVVSGLRAHRRLRPDTCGKVKFTARAHGPRVRVIKGEVIFEGHPEHNGYLRSEDPLNILSERNQIDTITNSNEAAAKGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00501289;
90% Identity: iTF_00578014; iTF_00591200;
80% Identity: -