Basic Information

Insect: Drosophila austrosaltans
Gene Symbol: kipf_1
Assembly: GCA_035045865.1
Location: JAWNOQ010000049.1:4489622-4493057[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.4e-05 0.0016 19.5 2.3 1 23 166 189 166 189 0.97

2 11 2e-06 0.00022 22.2 2.1 1 23 195 217 195 217 0.99

3 11 4.6e-06 0.00052 21.0 1.4 1 23 223 245 223 245 0.99

4 11 3.1 3.4e+02 2.7 2.8 1 23 258 281 258 281 0.93

5 11 8.7e-06 0.00097 20.2 3.8 1 23 344 366 344 366 0.98

6 11 0.0012 0.14 13.4 0.3 1 23 371 396 371 396 0.95

7 11 1.8e-07 2e-05 25.5 1.1 1 23 402 424 402 424 0.99

8 11 5.7e-06 0.00064 20.7 4.2 1 23 430 453 430 453 0.96

9 11 0.00011 0.012 16.7 2.3 2 21 614 633 614 635 0.94

10 11 0.00028 0.031 15.4 3.7 1 23 641 663 641 663 0.98

11 11 0.0068 0.77 11.0 2.4 1 23 668 691 668 691 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.4e-05	0.0016	19.5	2.3	1	23	166	189	166	189	0.97
2	11	2e-06	0.00022	22.2	2.1	1	23	195	217	195	217	0.99
3	11	4.6e-06	0.00052	21.0	1.4	1	23	223	245	223	245	0.99
4	11	3.1	3.4e+02	2.7	2.8	1	23	258	281	258	281	0.93
5	11	8.7e-06	0.00097	20.2	3.8	1	23	344	366	344	366	0.98
6	11	0.0012	0.14	13.4	0.3	1	23	371	396	371	396	0.95
7	11	1.8e-07	2e-05	25.5	1.1	1	23	402	424	402	424	0.99
8	11	5.7e-06	0.00064	20.7	4.2	1	23	430	453	430	453	0.96
9	11	0.00011	0.012	16.7	2.3	2	21	614	633	614	635	0.94
10	11	0.00028	0.031	15.4	3.7	1	23	641	663	641	663	0.98
11	11	0.0068	0.77	11.0	2.4	1	23	668	691	668	691	0.95

Sequence Information

Coding Sequence: ATGGAAAATGTGTGTCGCGTGTGTAGGGATGGCTCGGTCACCTTAGTAGAAATATTCAGCGGAGTGCAGAACGGCGACTACGACAACGAGGAGCAAGAAAAGAATTTAGCTTATGTTCTGAGCCAGTGTGCCAACTGTCAGGTTACGCGGGACGACTTACTACCAAAACAAATATGCCTGTCCTGTGTTCTAGCAGCTCAAAATGCATTCCGATTCAAAAAAACATGTGAAGAAAGCTATTTACACTTTTGTCAACTCCTGGAGATGGGTGGCCAAAAACAACATAGTGTCCCACAGGTAGATCGGAGATTCAACGATAATGATGTGCTCATGGAGGGTGGTCTACATGTCATCGATGTGAGCTGCATCAAAACAGAGCCTTGTGTCGAGCTACAGGAGAATGTCATGCCAACTGACAACGACACAACGGAGGATGCATTTAGAACCATCGCTCCCGGTGAAGATCAGGGCAACTTAACTAGCGAGGTGTTCCCGCATGTGTGCCAGTACTGCACTAAAGGCTTTCGAGGATCCTACGAGCTCAACAATCACATTCGTTCTCGTCATACAGGAGAACGGCCATTTAAATGCCCCCATTGCCCAAAGGATTTCTCTGTACGAATGTATTTAAGAAATCATCTTCGTGTCCATACGGGGGAGCGTCCTTACAAATGTCCACATTGTCCTAACGCTTTCACCCTGTCCAACACCCTTAAAGCTCACATTCGAAAACATGGTGATGGGCGAAACCGATTCTTTTCCCGCAAACTGTTCAGATGCGACTGCTGTGCGGCGTCTTTCCGGAAGGCATTTGGCCTACGTATGCACAAGCAATTGAAACATCGCATTAGTGATACAATTGAAAAAGCTAAAGAAAAGGGCCCTCAGTCGTCAATTCAACGTTCCAAGGCAAACGCCAACATACAAGAAAGTCTTctggaaattaaaaaagaaccGGTAGAAAAGGTGGATACTTCACCTGAGCCTGTCCCCGGCGAACCAAATGAACATGTTGGCTTCCCTAATAAATATTCCTGTTCGATTTGCGACTTGAAGTTTCGTTACAGATACCAATTTACCAATCATATGCGCTACCATGCGAAGCGACCCTTTGCGTGTCCTGATCCAAAATGTTCACAGGCCTTTCAAACAGAAATCAATCTCAGACAGCATCAAATGCGTTTTCATGCCTCCGATTGGCCATTTCAATGCGATGAGTGTCCTAAGGGTTTCTATAATAATTACAGTCTAAAACTACACATGCGATCACACAGTGGAGAACGTCCATTTGAGTGTCCACATTGTCAACAAAGATTTACCCAAAAGCAGAACTTGACTCGTCATGTAACTAGAAGACATTCTCAGGCCGGTGCTATAGAAACAACTTCAACAGATGGACATATTAGTGAAAACTGCAAGACGTCAAGTGTAGATCCCCGCATATTGATTAAATCAGAATTTCCAGAGCAGATTCGACCCCATGAATTTCAAGAAGAACAAATTCTACCAGATGGCGATGACGTTATTAAGAACCCAGATATGCTGCACAAGCTCATGAAACACGGCATCAACGAGGAAACAAATGATGTGGAAGATCAAAAGTTGAATTTAAGCGGGCTGGAAGATGAAGaagcaaatttgaaattaCGGAATAGACCTGGAGCTGGTGCGTACGAAGAGCTTGAATTCGAGGACAGTGATGTTGAAAGGCGTaacatcaataaaaaaaaggccaTATCAAATCCGAAACCCATAATTGTTGAACTAATACCATTACCACAAGCTCCAACAACCGAAGATCATTTGACCAACACAGAGAAAAGCCTGGCAAAAAAAAATGTATGTCCGTATTGCTTTAAGCGTTACGTACGGAAAGAGAGCTTAACCGTTCATATGAGATGTCATACTGGCGAACGACCATACAAATGTTCATATTGCGATTTAAGCTTCAGTTCGAATAACGCTTGCAAAAGACATCTTCGAGGGCATACTGGAGATCTATTTCGTTGCGATAAATGCCCAAAAGTATATAAGGCTCGATCTGAGTTGCGATTtcataaaaatagaaaacatagCGCCTCCATAGAGGAGCCAATTGTATTAACAAAACGTTTGATTGTACGTTTAGAACGCATTAAACTACCACCTAATATTAAGATGGAACCGTTAGATACTTTAGCTTAA
Protein Sequence: MENVCRVCRDGSVTLVEIFSGVQNGDYDNEEQEKNLAYVLSQCANCQVTRDDLLPKQICLSCVLAAQNAFRFKKTCEESYLHFCQLLEMGGQKQHSVPQVDRRFNDNDVLMEGGLHVIDVSCIKTEPCVELQENVMPTDNDTTEDAFRTIAPGEDQGNLTSEVFPHVCQYCTKGFRGSYELNNHIRSRHTGERPFKCPHCPKDFSVRMYLRNHLRVHTGERPYKCPHCPNAFTLSNTLKAHIRKHGDGRNRFFSRKLFRCDCCAASFRKAFGLRMHKQLKHRISDTIEKAKEKGPQSSIQRSKANANIQESLLEIKKEPVEKVDTSPEPVPGEPNEHVGFPNKYSCSICDLKFRYRYQFTNHMRYHAKRPFACPDPKCSQAFQTEINLRQHQMRFHASDWPFQCDECPKGFYNNYSLKLHMRSHSGERPFECPHCQQRFTQKQNLTRHVTRRHSQAGAIETTSTDGHISENCKTSSVDPRILIKSEFPEQIRPHEFQEEQILPDGDDVIKNPDMLHKLMKHGINEETNDVEDQKLNLSGLEDEEANLKLRNRPGAGAYEELEFEDSDVERRNINKKKAISNPKPIIVELIPLPQAPTTEDHLTNTEKSLAKKNVCPYCFKRYVRKESLTVHMRCHTGERPYKCSYCDLSFSSNNACKRHLRGHTGDLFRCDKCPKVYKARSELRFHKNRKHSASIEEPIVLTKRLIVRLERIKLPPNIKMEPLDTLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -