Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_035045865.1
Location
JAWNOQ010000200.1:9072910-9075821[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.4 1.2e+04 -3.4 2.7 59 100 67 89 35 152 0.52
2 4 0.24 7e+03 -2.6 0.5 62 90 215 242 200 263 0.42
3 4 2.5e-95 7.4e-91 304.6 11.6 2 218 312 514 311 514 0.91
4 4 0.06 1.8e+03 -0.7 2.4 51 129 525 599 517 609 0.41

Sequence Information

Coding Sequence
ATGTTTAGTCCATTCAAAAAGATATTCacgtatatacaaaaaaatgccAGCAGCTCGAATATGTTTGGCCAAACATCAATAGCAAGCGCTGCCATTCCGGAACAAAGATTAAATGCCGACGAGGAAGGCCGAGTCACTGGCACTGACATCAGTAGAGAGGAGTTGGGCGACGAAGAGGAGCAACAATTGCCGCAAGCCAGAGAAAAACTGGGtgatgaggaggaggaggaggaggaagttGACATAGAGAGGCAAATTAAGACATCAATAATCGATGCAAGTAAAGTGCATGCAGCTAAAGTGAAATCTCTTGCAATACAATTGGATGATGAACTGGCCGATTTTGCCCATGATCCTgtcgagcagcagcagcagcatagtTCCACTCTAGCACCACAAGAAGATGACCAATTGGAGGAACAATTCCTAGAGCTTGATAATTTTCCGAATAATGAGATTATTGTCCTAGATACAGATCTCAATTCGTCTCTAGCTTCGGATAATATATCTGAAGATCCTTTGGCGATTGATACCATATTGGATTCATCATCGGTGACCACTAATGAGGAAGTGGACACGAGTAGTGATATTTTATGGTTGAAAATAAATCACGAAACACCCACACCAAATGTAAAAGAAGAAACGCAACAAAACCGGACAGCAGAAGATGACCAAGATCCGGAACCGGAAACGGTGCAAGGGAAGCAGACCAAGACCAAAGAGGAAGAGCTCCGTAGCAGCGATGGTGGCTCAGATTCCGGCCTGGGTAGTGAAACTTCCATTATTAAAGAGCCATCATGCCATAGCCCAACCAAACCCATTCGATCGAATCTTAAGAGACGTCTAGAAGTTGAGGATGGCATCGATCTGGTACCAGATATAGCCACCAGTTCCTCAAGCACAACGACCACACCAACAACCAATCAAAAGCGACCCAAACGCTGTATCAATTTCGATAATGTCAAAGTCTATTATTTTCCCCGGCAGCAGGGATTCAGTTGTGTGCCCACTGCCGGTGGGTGCACGCTGGGCATGGGTGCAAGGCACATAGCCTTTAAGACGATGACATTGGCGGAACATGCTGCCGAACTAAGGCGTGCCCATCGCAATCAAAATCAAGAGTTGCAAACACGAGGCTCCAGCAGTGATGATAGTGAGGAATCCGAAGAGGATTATCTTACTGAAAGTAGTAGCTCCGATGCGGACGATGGCTCCAATGGCTTCCTTCAACCTGTTACACCGAAGCAAAGACGAGCTTTGCTTAAGGCGGCGGGTATTCGGAAAATCGATGCCAGCGAGAAAATTGACTGTCGAGATATACGAAACTCGCGAGAAGTGTGCGGGTGTTCGTGTCGAGAATTCTGTGATCCTGAGACTTGTGCTTGCAGCCAGGCGGGCATCAAGTGTCAAGTGGATCGAGCCATGTTTCCCTGTGGTTGTACCAGAGAAGCCTGTGGCAATACTGTGGGTCGTGTGGAGTTCAATCCAACGCGTGTGCGAACGCATTACATACATACCGTTATGCGTTTGGATTTGGAGCAGCGGCAGGGTGTCCAGCATGGGTCACTTcatcaccagcagcaacagcagctgcagcagcaacaacaacaccaacagcagagCTACACCGCTGTTGGAGCAACACAATCAACATCCCCCCATTGTTACTTTATGCAGACGCAATCCAATTACAGTTCCGGCTATGCTTCGCCAGCTTATACGCCGGACAGTAGTGTTAGCTAttatcagcagcaacaacagcagcagcagcaacagattaTTGTCAATTCATCTGGCAATCCGCAACAGAATCAGAGCACCTCCTCATACTCTGGTTACGCCCAATTGGATAGCCTCGATTCCGGTTTATTTGCAAGTAATAGCAATGGTACACCCTCCTATGGAGAACTCTACCAATCGCTGAGCTATGGAAGTGCCCAGATTACCTCCTATCAAACCGTCGCCTATCAGCATACATCATCACCCGCCGTCGCCTCCGTCTCTGCAGCAGCTGGAGCTGTTGCAGTCAACGCCTCTGCTGGGACGCCTAGTGCCCAGTATAGATCTTGTTCCGTGCCGTCGGCACCGCCGTTTGGTAATGCCACCACAACAGCCTCCACCAATTCCCAATATCAAACCACCGCCTCAATGACAGCTGCCTCAACCAACGGAAGTTGTTCGCGTCTTGGTGGCAATTCTGCCACCTCCGTTGCAGCCACCTCGCCAGCCGATTTCATCAGCCTCAATTCGCCAATTGCCAGTTCGTCGCGTCTCTCCCAGATCAATGATTTACTGCAACATAATCGCAATACAACAGCTGCCCTGGTGGCCGTTTCGGAGGGTTATGGTGGTGTTAGAATAAGTTCGACATCAACCGTCGTAGATTCCATTGAAACTCCACCAATTGTCGAGGAAACCCAGCAGCGAAGTTGCATGAACTTTGAGCAATTGCCGCCGCCTTTAATCAATCCCACGCCCATAGTGACAGTGGTAGAAAAGAAATTACCAGATAtatcatcaacagcagccgcagcagctcAACAACCAACAGTACCAAGCATTCAAGGACCACAACCGCGTCAGCCGCTGGATGTGCAATCTCTGACAGAGACCACCTAA
Protein Sequence
MFSPFKKIFTYIQKNASSSNMFGQTSIASAAIPEQRLNADEEGRVTGTDISREELGDEEEQQLPQAREKLGDEEEEEEEVDIERQIKTSIIDASKVHAAKVKSLAIQLDDELADFAHDPVEQQQQHSSTLAPQEDDQLEEQFLELDNFPNNEIIVLDTDLNSSLASDNISEDPLAIDTILDSSSVTTNEEVDTSSDILWLKINHETPTPNVKEETQQNRTAEDDQDPEPETVQGKQTKTKEEELRSSDGGSDSGLGSETSIIKEPSCHSPTKPIRSNLKRRLEVEDGIDLVPDIATSSSSTTTTPTTNQKRPKRCINFDNVKVYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHAAELRRAHRNQNQELQTRGSSSDDSEESEEDYLTESSSSDADDGSNGFLQPVTPKQRRALLKAAGIRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDLEQRQGVQHGSLHHQQQQQLQQQQQHQQQSYTAVGATQSTSPHCYFMQTQSNYSSGYASPAYTPDSSVSYYQQQQQQQQQQIIVNSSGNPQQNQSTSSYSGYAQLDSLDSGLFASNSNGTPSYGELYQSLSYGSAQITSYQTVAYQHTSSPAVASVSAAAGAVAVNASAGTPSAQYRSCSVPSAPPFGNATTTASTNSQYQTTASMTAASTNGSCSRLGGNSATSVAATSPADFISLNSPIASSSRLSQINDLLQHNRNTTAALVAVSEGYGGVRISSTSTVVDSIETPPIVEETQQRSCMNFEQLPPPLINPTPIVTVVEKKLPDISSTAAAAAQQPTVPSIQGPQPRQPLDVQSLTETT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-