Daus009314.1
Basic Information
- Insect
- Drosophila austrosaltans
- Gene Symbol
- bab2
- Assembly
- GCA_035045865.1
- Location
- JAWNOQ010000052.1:10343788-10345938[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-12 1.8e-08 34.7 0.1 1 44 414 457 414 458 0.91 2 2 3.1 8.2e+03 -2.7 0.9 4 20 555 570 555 570 0.86
Sequence Information
- Coding Sequence
- atgggtggtggtggcggtgggcCCACACCCACTCCCGTTGCCAGTAGTGAAGGGCAAACGTATTGCCTTCGCTGGAATAATCATCAGACGAATTTGGTACAGATACTCCATGCACTGCATGAGGTGGGCAGCTATGTGGACTGTACTCTGGTTGTGGATGATGAGCAGTTTAAGGCTCATCGTGTGGTCTTGGCCGCAAATTCACCATATTTCCAGCATATATTACAGGATGTGCCACAGGATCATTGTAGCATCATTTTGCCAGGTGTTAAGGGATTCGAAATTGCAGCacttttgcaatatatgtatacgggTGAGACGACAGTGACCAAAAGCCAGGAGCCGGAAATCCTGCGCACAGCCAAAGAGCTGCAGGTGAAGGGTCTCTATgacaatttaatgaaatttaacaacaacaagcaatcgggagcagcagcagcagcagaggaGCGTGTACAGAGTCATTATCATGGTAGTAGCATAGCTCCAACATCTAGTTCCGGTGCCTCGGGCAAGTCACAGAATGGCGATAGCTTTGggcaccatcatcatcatcagcagcagcagcagcaacagcagcagcagtcgtcGCATCACAATTCCTCCTCCTCCGTGATCTCAACGTCAACGCATATTTCGCCCAGCGCCGCCATTTCGAGCAGCTGCTCGCCCCCACCGCCACCATTTGGAGCCTATCAACAGCCGCCATATACGAATTATCCATCCGGACCAAGCCATCCACATATTCCAGCCGGTGAGACCCCATTGACCCCGACACATACGACACCCCATGCTGCAGCCGGTGAGGCAGGTGGCCAATGGCCACTATCTCCCtctgccgccgccgctgccaTGTTAAATTCCGTTTATGAGAGTGCTGCCGATATGAATCCACTCAAGCGCAAAAAGCTCTCGGCCATATCTAGTATGTTGCTCAATAGTACTCGTGACACTCCCATTCTGCGTAATGTACTGGCTCAGGCCAATCCGGCGGACTCTtcccagcaacagcaacccaATCCTTTGCTCTTGAAGAGTTCTTCCTCGTCCTCGCTGGCGGAGAAGGCACCCACACATCAGAGTGGTGGCATGGGAGGTGGAACAGGTAGCCACAGTTTCAATGGCTCAGACTACGGCGGCGATAAGGAACCCCTTTCGCCCCATACAGATCGCTCGTTCGATGAGGAAACCGGAGGTCCTGGTGGCAAGAAACCAGAATGGAAACGCTATAAACAATATACCCGTGCCGACATGATGTGCGCCATTCAGGCGGTGCGTGAGGGCATGAGTGCCTTACAGGCGAGTCGGAAATATGGTCTACCCAGTCGAACTCTGTACGATAAGGTGCGCAAATTGAATATTACCACAGGTCGTGGCACTCATCGTACACCCAAACGTAGCCCACCTGGTGTGGAGTCGTCGGCTGCCTTCCCCTATTCCGCTGCagcggcagctgctgctgcccacAATTATGGCCACGGTCAGGCAGAGCTGCTGGAACGCAGTGAGCAGGCCAAGGAGCATGGTTCCCATCATTCACATCACGGCATGCCACCAACAATATCCCATTCGGCAGCTGCTCTGCTGGATCATGCATTCCTCCAGCAGGCCCTGGAGAACCGTGGTGGCGATATGGCTGGACGAGAGGCACTGCATGCCATGGCATTGGCTGCCGCAGCACATGCTGCTGCCAATCGCATGTCCACAAGTCCACCAGGTTCAGGTTCAAATGGTCATCCGCATGGCGCACGATCACCGAGTCCCAGTCCAAGTCCACGACATTATGCCGAGGATTTGGAAATACATGAGACCAAGCATGAACGGATGATCAAGCGTGAACGAGATCAAGATGAACGCGAAGATGCCGATGCTGATGATGAAGAGGATCATGATCATGTTGAAGATTTATCATTGGCGCGAAAAGAAAGACCCGAATCGCCATATTCACCGCCACCGCCAAGGGCCTCATCCCCCATGGAGGGAGCCAGTGTCATAATGCACTCCTCAAACTCTATGTCAACAAATGGCAAAGAGCATGAGGATTATCCAGCCTCTGCTTcatcaccaccaccagcaccacctTTGGGTCTTGGCCTAGGCCTTAAACGGGAACTAATGGGGGGCGATGAAACGCAAGCTCGCACAGACTGA
- Protein Sequence
- MGGGGGGPTPTPVASSEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNNNKQSGAAAAAEERVQSHYHGSSIAPTSSSGASGKSQNGDSFGHHHHHQQQQQQQQQQSSHHNSSSSVISTSTHISPSAAISSSCSPPPPPFGAYQQPPYTNYPSGPSHPHIPAGETPLTPTHTTPHAAAGEAGGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQQQQPNPLLLKSSSSSSLAEKAPTHQSGGMGGGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAHNYGHGQAELLERSEQAKEHGSHHSHHGMPPTISHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSTSPPGSGSNGHPHGARSPSPSPSPRHYAEDLEIHETKHERMIKRERDQDEREDADADDEEDHDHVEDLSLARKERPESPYSPPPPRASSPMEGASVIMHSSNSMSTNGKEHEDYPASASSPPPAPPLGLGLGLKRELMGGDETQARTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501130;
- 90% Identity
- iTF_00483777;
- 80% Identity
- iTF_00483777;