Daus012926.1
Basic Information
- Insect
- Drosophila austrosaltans
- Gene Symbol
- -
- Assembly
- GCA_035045865.1
- Location
- JAWNOQ010000073.1:19953399-19954673[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-13 6.4e-10 39.3 0.0 3 39 259 295 257 300 0.93 2 3 0.0084 23 5.5 0.0 25 39 328 342 317 348 0.83 3 3 9.7e-16 2.6e-12 46.9 0.0 2 45 367 410 366 410 0.95
Sequence Information
- Coding Sequence
- ATGGGCCATTCGGCCACCATCATGGGCATTCAGTGTTCGCTGCTAAATGACGACAAATCGTGTGAAGTTATCCTGGTAACCCAAGATGGTACAAGTGAGCGCGCCCATCTCTTCGTCCTTTGCATATGCAGTGATTTAATGCGAAATCTGCTAAAGGATTTACCACCAGGCCAGGAAGCAACTATAATTCTACCTGACATACGAGGCGACCTATTGGAAAGCATACTCTCGTTTATTTACGTGGGGGAAACAAACCTGCCCTCGGACTCGCTTACTGAATTTATGGAGGCCTTGAATTTACTCGGCATAAAGGCGCCAATACGGTTCAAGTGCATACCCAATTCCGATTTGCAAATCGAGAATTCTGAATTATTCGATGAAGAATATGAAATTGCGGAATACGTACCCGAAGATGACGAATCCGATGCTGTGGAAACTAATTGCAAAAGTAAAGGAGAGGAGGTGGAAATGTTTATGCTTGAAGATGACTATATGGCAATCGATCCCTTAAACAGTTCGGCAGTTTGTACAGATGCTGAAATGGATGAAGCTGAACCTGAACACGAGGATGAGGCTGAACGTGAGGATGATGGTAACGACGACGAAGACGATGGCGATGTGTTTGATGTAATGGAAATGAAAGGTGGTTCGAAACCCAAGCCCAAATCAAAACCCCGTCGTGAGACTAATCCAAAGACGAAACGCTCAGCCGGCAAGCAGGCCCGAGAAAAAAGAAGTAGATCGCACAGTATCGAGGGTAAAGATGGCATCACTGATGCATTGGAATTGGCAGCTGATGCCGTCATCCGTCTCAAGCTTAGCCTACAAAAGGCTGCTGATCGCTATGATATATCGAAAACAGTTTTGTGGCGTCGCGTGCGCCTTTGTCCTGAATACATACAAAGCAATCGCAAGAATCCTATGCTCTCGGAGGCTCACAAACGACTTAAAAAGGGCCATTCTCTGAAGAGTATTTGCAGTGAGTTAAATGTACCAATGTCAACTCTCCACCGCCACAAGATGCGTCTGGTAGCCTCAGGGCAAATACCAGATTATGGGAACGATGGTCGTCGTGATGCCACACCTAAAGATGAACTCAACGAAAAGCTGACAAAGGCGATGCACGCTTGCATACACGAGGGCATGACAGTGAATCATTCGGCCAATCTATTCGAGATACCCAAGAGCACACTTTGGCGTCACTTGCAACGCAAGACGCCTAAATCCCGGCCCAGAGGAAGAAGAccaaaaaagccaaaagtcgaagaagaataa
- Protein Sequence
- MGHSATIMGIQCSLLNDDKSCEVILVTQDGTSERAHLFVLCICSDLMRNLLKDLPPGQEATIILPDIRGDLLESILSFIYVGETNLPSDSLTEFMEALNLLGIKAPIRFKCIPNSDLQIENSELFDEEYEIAEYVPEDDESDAVETNCKSKGEEVEMFMLEDDYMAIDPLNSSAVCTDAEMDEAEPEHEDEAEREDDGNDDEDDGDVFDVMEMKGGSKPKPKSKPRRETNPKTKRSAGKQAREKRSRSHSIEGKDGITDALELAADAVIRLKLSLQKAADRYDISKTVLWRRVRLCPEYIQSNRKNPMLSEAHKRLKKGHSLKSICSELNVPMSTLHRHKMRLVASGQIPDYGNDGRRDATPKDELNEKLTKAMHACIHEGMTVNHSANLFEIPKSTLWRHLQRKTPKSRPRGRRPKKPKVEEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00577701;
- 90% Identity
- iTF_00577701;
- 80% Identity
- iTF_00483803;