Daus009205.2
Basic Information
- Insect
- Drosophila austrosaltans
- Gene Symbol
- Arid4b
- Assembly
- GCA_035045865.1
- Location
- JAWNOQ010000052.1:9509172-9509709[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 4.7e+03 -1.2 0.0 46 67 8 29 5 39 0.50 2 2 7.5e-25 1.8e-21 77.0 0.0 5 89 48 131 44 131 0.94
Sequence Information
- Coding Sequence
- ATGCCCAGACCGAAGTCGGGGATAAAAATAGTAAGCCAAAGTAATAAGGCTCCATTAATGGCCAAAAAGCCACGCTTGACACCAGGCGAAGCAGACTTGCTGCAAATTTACAAAATCGATGATGATCCGGAAAGAGGACCTTGGCTGGATCATCTCTTTGGATATATGAAGGATCGTGGCACACCAATACGCAAATGTCCGAAAATTTTGCGTGATCCCGTcgatatttataaattgtatCAATTAGTTAAGACGTGTGGTGGATATGCCGAGGTCACTAGGAATGGTTTATGGAATGAAATTGCACAGAAACAGGGCATAGATATTAAAGTGGCAACAAGTGCCACCACAAGACTACGTATACATTATTGCAGGACTATTTTACCATTTGAATGCCAATTTGATCGTGGTGGGATTGATCCCTTGCAGGTTGAAGCGGACGGCAGGAAGCCTAAAAGTACTGGCACTTTGACACTTTTTTGA
- Protein Sequence
- MPRPKSGIKIVSQSNKAPLMAKKPRLTPGEADLLQIYKIDDDPERGPWLDHLFGYMKDRGTPIRKCPKILRDPVDIYKLYQLVKTCGGYAEVTRNGLWNEIAQKQGIDIKVATSATTRLRIHYCRTILPFECQFDRGGIDPLQVEADGRKPKSTGTLTLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00611849; iTF_00555627; iTF_00523469; iTF_00500823; iTF_00618135; iTF_00577560; iTF_00570906; iTF_00590747; iTF_00503038; iTF_00600095;
- 90% Identity
- iTF_00555627;
- 80% Identity
- iTF_00577560;