Basic Information

Gene Symbol
NCOR1
Assembly
GCA_008042615.1
Location
VNJW01001517.1:54985-59844[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.5e-08 0.00012 22.3 0.0 3 43 482 522 481 524 0.97

Sequence Information

Coding Sequence
atgccCGGCGGATATCAAAGAGTGGCAGCTGCGGCGACAGCGGTGCTGGCGGGCAAATCGTCCGCTCCGGGCCAGGGTGGTTCCAATGCCAGTCAAGGGAGTGGTGGGAGCGGGAGCCAGGGCGGAGCTGCTCCGCCCGGCGGCGGTGTGGTGCAAGTGTCGCAGTCCGGCGGTGTCCTGGTCATGGAGGCCGCGCCCCACTATGCCAGCCAACCAAATAGTAATCCctcccagcagcaacagaagcagcagcagcagcagcagcagcaacagggaGCAGGACCCTCGCCATCCGGCGGGGACAATTGCAGCCGCATAATGGTCAGCAATCGGGGCATCCTGATACCCCACTCGCATTCGCTGCAGTACACCAGCGACCTGCCCGTGGGAACGGTGACCGTGTCCACAGCGGGATCCGGAGCATCGtcgagcaacagcagcagccatgtGATTGCGGGAGCGGGCGCGGGAGCAAGTGCCAGCACAGAGGCCTACCATCCACAGGTGGAGGCCATCTCGCCCACCCTGCCCAGCGACAATGCCATCGAGGAGCGTGGTCGGACCAGCGCCAAGGAGGATCTGCTCATGCAGATCCAGAAGGTGGACAATGACATCAAGTCCGCCGAGACCACGATGGAGACGCTGCGCAAAAAGGAGAAGAGCCTCATGGAGGAGGCGGCCCTGGCCAAGCAGCAGAAGGCCGCCAAGGAGGTGGAggctaacaacaacaacaataacgaTCAGGATGAAGTGGTGGAGCTGGCCTGGCGCGGTCAAATGCTGGCGGAGAAGATCTATGCGGCCAATAGGAAGACGGCCCATGACCAACATTCCATGCTGCTCAAGAGTGcggcgacgatgacgacgacgacgacgatagCAGCAGCGACGACAACGGGGACGACGACTATGGCAGATGCCATCCGACGACCCTGGCTGCCGCTGTACAACCAACCCCTGGACGTGGACGCCCTGACCGTGCTGATACGCCAGCACCAGAGCCAGGTGCGGGCgcccctgctgctgcacaTCCAGAAGCTGAAGGCAGAACGCTGGATGCACAACCAGGGCCTGGTGGAGAAGTACACCAAGGAGCAGGCCGACTGGCAGCGACGCTGCGAGCGCATGGAGGCGAGCGCCAAGCGGAAGGCACGCGAGGCCAAGAACCGCGAGTTCTTCGAGAAGGTCTTCACGGAGCTGCGCAAGCAGCGCGAGGACAAGGAGCGCTTCAATCGCGTCGGTTCGCGCATCAAATCCGAGGCAGATCTCGAGGAGATCATGGACGGCCTGCAGGAGCAGGCTTTGGAGGACAAGAAGATGCGCTCGTATGCCGTCATACCGCCCCTCATGCACGATGCCCGCCAGCGGCGCTGTGCGTATCACAACGAGAACGGCAGGATCGAGGACATGATGGCGGAGCATCAGCAGCGCAAGGCCCTCAACATGTGGACGGCCGGCGAGAAGGAGACCTTCAAGGAGAAGTATCTGCAGCATCCGAAGAACTTTGGGGCCATTGCGGCCTTCCTGGATCGCAAGTCGCCGCAGGATTGCGTCCGCTACTACTACCTCAGCAAGAAGACGGAGAACTACAAGCAGCTCCTGCGCAAGTCCCGCCAGCGGACGCGCAGCTCCCGCAATCCGGCCAAGGCCCAGGCCGCCCAGCCGCAGTGCATCATTGACTCGATGACCACCGGCGTGATGACGCGCCTCCagcgcgagcagcagcagaagtcCGGCAATCGATCCTCGGCCGTGGCCGAACGCGAGCGGGCGGAACGCGCGGCCGAGCGGGAGCGGGTGGCGGAGAAGGCCGCCGCGGATGCGGCCAAGGCGGCAGAGAGTGCGGCGGAGAAGGCCAGTGCGGCCACCAAAGCCGTGGAAGCCTCGGCGGCGGGCGAGAAGGTGGCCAAGCAGGCGGCccaagcagcagccgcagcagcctcGGCGGCAACGGTGGCAAGTACAGCGACgaccacgacgacgactgcTTCTACGGCGGCCTCAACCTCAGCAGCGGacaaggcggcggcggcggcggaggcagcAGCGACGACGGTTAAGGCCTCCTCCAGCGATAAGAATGccccagcagcggcagcttcGGCTGCAGCCTCTGCTCCGGCGGGCAAACCTGCATCTACAACCACAACGGCACCAACACCATCAGAGATCTCAGCGGGCGGCGGCGAGGCTGCTGCCAAGTCTAGCAAGGCATCACCCGAAGAAGAGGCGGGAGCCGCCTCAGTGGCAGCCACGGCTGGCCACACACCAGCCAGCAAGACGGCGGCCAGTGCGGCCTCGGAGGCCAGCACAAGCACGGCCACCGGAGCCACGGCCACCGGCAAGGGAGCCAGCAAGTCAGAGACGGCCACCGAGCCAGCGGCGGGCACAGCGGCCAAGGGTGCGGAGGCTGCCGGAACAGAAGCCAGCAGTGATCCGCTGGCCAAGACCGGACCCAAAGAGAACGCAAATGCCACCAATGCCACACCAGCTGCTCCAGCGCCTGCCCAAGGCGTAACCTTGAATGGCTTTAAGTCGGGCTACCAGAGCGTGGTCATGGCCAATGTGAAGGCTTCGCAAGGAGGCGAGGATTCGGCCTCGGGAGCCACAAAGAATGCGaatggtggcggcggcagcaacgaTAAAATCGTCAAGACAACGCCAGCAACGCTTGCTAATTCCACGAGCTCCGGATCCGGCGAGagtggagcaggaggaggagccacaGTGCCCACTTTGACCACCGCCACAACGGCAGGCAATTATCTGGGCCAGAAACTGAAGGCGGCCCAGGTCGAGGGACTCGGAGCGGGCAACGATCTGCATGGGGATGTTAGTGACTCCAAGCGTAAGCGCTTCGAACTGAATGCTAGCGAAGCTCAACAGCTAGGAGCAAGTGCCACCAATAGCCacaacagcaataacaacaacctGAAGGCCAATGCCAAGGATGCGTCGATGGTCAAGTCATCAGCCGCCTCATCggtatcatcatcatcctcagCCTCCTCTGTGGTCACCTCCACGCCGGCCGCGTCCTCGTCTGGCTCTATTCTCCTGATCAGTGCTGCTTCTATAATGTCCACGGCAGCAGGTTCGGGTTCCACGGCCACTGCTCCGGCGAACTCCATGCCCCTGCTATCGGATGGCAACGAGATTATCGCTTTGGATGGCAAGGGAAATGCCCTTTTGCGGGCCTTCGAAAGCTAA
Protein Sequence
MPGGYQRVAAAATAVLAGKSSAPGQGGSNASQGSGGSGSQGGAAPPGGGVVQVSQSGGVLVMEAAPHYASQPNSNPSQQQQKQQQQQQQQQGAGPSPSGGDNCSRIMVSNRGILIPHSHSLQYTSDLPVGTVTVSTAGSGASSSNSSSHVIAGAGAGASASTEAYHPQVEAISPTLPSDNAIEERGRTSAKEDLLMQIQKVDNDIKSAETTMETLRKKEKSLMEEAALAKQQKAAKEVEANNNNNNDQDEVVELAWRGQMLAEKIYAANRKTAHDQHSMLLKSAATMTTTTTIAAATTTGTTTMADAIRRPWLPLYNQPLDVDALTVLIRQHQSQVRAPLLLHIQKLKAERWMHNQGLVEKYTKEQADWQRRCERMEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMHDARQRRCAYHNENGRIEDMMAEHQQRKALNMWTAGEKETFKEKYLQHPKNFGAIAAFLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAAQPQCIIDSMTTGVMTRLQREQQQKSGNRSSAVAERERAERAAERERVAEKAAADAAKAAESAAEKASAATKAVEASAAGEKVAKQAAQAAAAAASAATVASTATTTTTTASTAASTSAADKAAAAAEAAATTVKASSSDKNAPAAAASAAASAPAGKPASTTTTAPTPSEISAGGGEAAAKSSKASPEEEAGAASVAATAGHTPASKTAASAASEASTSTATGATATGKGASKSETATEPAAGTAAKGAEAAGTEASSDPLAKTGPKENANATNATPAAPAPAQGVTLNGFKSGYQSVVMANVKASQGGEDSASGATKNANGGGGSNDKIVKTTPATLANSTSSGSGESGAGGGATVPTLTTATTAGNYLGQKLKAAQVEGLGAGNDLHGDVSDSKRKRFELNASEAQQLGASATNSHNSNNNNLKANAKDASMVKSSAASSVSSSSSASSVVTSTPAASSSGSILLISAASIMSTAAGSGSTATAPANSMPLLSDGNEIIALDGKGNALLRAFES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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