Basic Information

Gene Symbol
Kdm5
Assembly
GCA_008042615.1
Location
VNJW01012274.1:11885-20068[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-26 3.4e-23 82.1 0.1 2 89 231 314 230 314 0.95

Sequence Information

Coding Sequence
ATGTCCGCCAAGACCGAGGCGGACAATACGACGGCCGCCAATTCGGGCGGCATCGGCGGAGGGGCCAACAGCAGCGGCTCATCCTCCGCCGGCGGCGGAACAGCATCCGCCAACGGAACAGCGACTCCAGCGCGTCGCCTTCGCACTCGCAACTCGACAGGCCACGGAGCTGCCAGTGGCGGCGAGTCCGCCAAGAAATCGAATGCCAGCGATGAGACCTCCTCCTCCACTCCAGTCACCCCGGCAGGTGCCCATATCACGCCCGCAGCAGCCGGCCCGACGGTGGCCGAGCGGCCCATGCCCAGTGTACCGATGAACcatgccagcagcagcgtaTCGGCCAGCAAGAAGTATCACAACAGCTGCCCCCATCCGACCCCCACGCCCCCGTCCGGACACAAGAAGACGGTGCACACGCAGccgcacagcagcaacaagttCGACCAGGGAAAGAACGAAGAGTTTCACTTCGACACTCCGCCAGAATGCCCCGTCTTTCGTCCCACTACCGAGGAGTTTAAGAATCCACTCGCGTACATCAGCAAGATCCGCTCCATAGCGGAGAAGTGTGGCATCGCCAAGATACAGCCGCCGGCCTCCTGGTCGCCACCCTTCGCCGTCGATGTGGACAAGTTGCGCTTTACACCGCGCGTCCAGCGGCTCAACGAACTCGAGGCCAAGACGCGGGTTAAGCTCAACTTCCTCGACCAGATCGCCAAGTTCTGGGAACTGCAGGGCTCCTCCCTCAAGATTCCGATGGTGGAGCGCAAGGCCCTCGACTTGTACACGCTGCACCGTATCGTGCAGGAAGAAGGCGGCATGGAGCAGACCACGAAGGACCGCAAGTGGGCCAAGGTGGCCAATCGGATGCAATATCCATCCAGCAAGAGCGTTGGCGCCACGTTGAAGGCGCACTATGAACGCATTCTGCACCCCTTCGAGGTGTACACTTCCGGCAAAGTATTGGGTCCCACGCCGGCAGCTTCTGCTGGTTCTGCAGGTGGTACGCCTGTGAAGCTGGaggacggcggcggcggcacagaCTACAAGGTCCATGAGATACCAACGCGGCAGCAGATTGCGCCTCCAAATGAAAGCAGCACTCGCCGCTCCAAACGCTTTGGCAACTCTAGCGCCAGCTGCGGCCTGAGCGGCGTTACACCTACTACGACGCCCAAGCCCTCCACCGCTGGGGTGTTCGTCAAGACGGAGACGAAGGAAGAGTTTAAACGAGATCTGCTTAGCAGCTTCAATGCTTCGATAAATTGTGGTGGTGGCGGCACGCCATCAGCCGCAGGTGGTGGCCCCGCCAACACTCGTGGCGCCAACCAAAAAAAGGGACTCGGCGAGCCTCCTGCCCTGATTGTCGATCCCCTAATGAAGTACATTTGCCACATATGCAATCGCGGCGACGTCGAGGAGTCCATGCTGCTCTGCGATGGCTGCGACGACAGCTATCACACCTTCTGTCTGCTTCCGCCCTTGACCAGTATACCAAAAGGCGAATGGCTCTGTCCGCGCTGCGTCGTAGAGGAGGTCAGCAAGCCGCAGGAAGCATTTGGTTTCGAGCAGGCAGAACGGGAATACACGCTGCAGCAGTTCGGACAGATGGCCGATCAATTCAAGCAGGAGTACTTCCGCAAGCCGGTGCATCTGGTGCCCACCGAGATGGTGGAGCGCGAGTTCTGGCGCATTGTGTCCTCAATTGACGAGGATGTGACCGTCGAGTATGGCGCCGACTTGCACACAATGGATCATGGCTCGGGCTTCCCCACCAAGAGCTCGCTGTATCTGCTGCCGGGCGACCAGGAGTACGCCGAGTCCAGCTGGAATCTAAACAACCTGCCGCTGCTGGAGGATTCGATTCTGGGACACATCAACGCCGACATTAGCGGCATGAACGCGCCGTGGATGTACGTGGGCATGTGCTTTGCTGCGTTCTGCTGGCACAACGAGGACCATTGGAGCTACTCGATCAACTATCTTCACTGGGGCGAGCCGAAGACATGGTACGGTGTCCCGGGCTCCTGTGCCGAGCAATTCGAGGAGACCATGAAGCAAGCAGCTCCCGAGCTCTTCTCCTCCCAGCCCGACTTGCTGCATCAACTGGTGACGATTATGAATCCCAACATCCTGATGAATAATCGAGTGCCAGTATTCCGAACCGATCAGCACGCCGGCGAGTTCGTCATCACCTTCCCTCGGGCCTATCACGCTGGCTTCAACCAGGGCTACAACTTCGCCGAGGCAGTCAACTTTGCGCCAGCCGATTGGCTGAAGATGGGTCGCGAGTGCGTCAACCACTACTCCATGCTGCGTCGCTTCTGCGTCTTTTCGCACGACGAGCTGGTCTGCAAGATGGCCCTGGAGCCGGCCAAGCTTACGTTCGGCATTGCCACCGCCTGTTACATCGACATGGCCGAAATGGTTGACACGGAGAAGAAGCTGCGAAAATCGCTCCTCGAGTGGGGCGTAACCCGCGCCGAGCGACGTGCCTTCGAGCTGGTCAACGACGACGAACGCCACTGCCAGGAGTGCAATACCACTTGCTTCCTTTCGGCAGTGGCCTGCGAGTGCAACGACAAGCTGATCGTCTGCTTGCGCCATTACACAGTACTCTGCGGCTGTGCTCCGGAGAAGCACACGTTGATCTACCGCTACACCCTGGACGAGATGCCGCTGATGCTGCAAAAACTAAAGGTGAAGGCGCACAGCTTTGAGCGTTGGCTGTCTCGTTGCCGGGACATCGTCGATGCCCACACACCGACTTCGGTGACActgcaggagctgcaggagtTGTGCAAGGAGGCCGAGACCAAGAAGTTCCCGTCGTCGCTGCTAATCGATCGACTTAATGCAGCGGCAATCGAGGCCGAGAAGTGTGTCACAGTCATCCAGCAATTGGGAATCAATAAGGTCCGCACCCGCTCCGATCACAACCAGGAGGCGGCTCAGTACAAGCTGACcatggaggagctggagctgttcGTCCAGGAAATCGATAATCTCTGCTGCATCATAGACGAGGGGGCATCGGTGCGTGAACTGCTTGTGCTCGGCAAACAGTTCGTGGAGCGTGCGGACGGGCAGCTGCAACTGACGCTGGAGGCGCTGGAGGAGAGTGAGCTGGAGACGCTGATCAGCGAGGGCAGCTCCCTGCGCAtcgagctgcagcagctcgaCTTGCTGCAGAAGCGACTCAAGCAGTGCAAGTGGTACAAGCGCTCGCAGGGATTGCGGGAGACGAGCTCGAAGCTGACCTACCAGGACGTGAAGAACCTCCTGCACATGGCAGGCGCCGATTTGGATCCAACGGATCCGTATGTGGACAGGGAAATGCGTAAGCTCCAGCAGATAGGGGCCGACATTGAGTCCTGGGAGTCGCAGGCAGCCAAGTACTTCCGTCGGCTGACCCAACAGCACGAGTTGGCCGAGATCGAGCAGTTCCTGAAGTCGGCCAGCGATATCAACGGTCAGGTGCCGTCGCACGGCCTGCTGAAGGATGCCCTGCGCAAGGCGCGCGAATGGCTTCGGTCcgtggagcagctgcagcagaacAACCATGTCACGTATTGCCACACTCTCGAGGCGATGATCGATCGCGGACTGAACATACCCATTAAGCTGGAGGAGCTCAGTCGGATGCAGGGTCACCTGAGCAGTGCCCACCAGTGGAAGGACAATACGGCGTGCGCCTTCCTCAAGAAGGGCACAAACTACACGCTCTTGGAGGTGCTTATGCCTCGGGCGGATGCCATTAATATTGACTCGGATCTCAAGCCCCGATTCCAGgATGActttttaaaagagaaaaatccTGCCGAGATTGTGGCCAGCTTCAAGAATgccgaggagcaggagctgctggaCATGCGCGATCTGCGGCGCCAGAACATGGCCAAGAACCCATTGCGCGACATGTTCTGCCTGTGCAAGTCCGAGTTCCGTAACGTCATGTACAACTGTCAGCTGTGCCGCGACTGGTTTCACGAGGACTGCGTCCCAGTGCCATCGGCGACGAATCAGAATGGCATTCTAAACGGTGGAGGCGGTGGACCAGGAGCAGGATCGAATCGCCCGAAGTGGTTGTGCCCGAGCTGCGTGCGCTCAAAGCGGCCCCGCCTAGAGACCATCCTTCCGCTGCTCGTCCAGTTGCAGCAACTCCCCATCCGTCTGCCCGAAGACGAGGCGTTACGCTGTCTGGCGGAGCGTGCAATGAACTGGCAGGATCGGGCCAGAAAGGCGCTGAGCAGTCCCGATGTGAGCGCCGCCCAAGAGGCGATactcgcccagcagcagcagcagaagcgtCGGTCTGAGGGCGGAGGTGTGGGCAATATCAACAGTCCGCGCAAGCCTCGACGCCGCACGAGTCTGTCGAAAGATGCCAGCGGATCCACCGAGTCCGACGATgccgacgatgatgacgacgatgacgattgCCGGCTACGCATCGTTGAGGATGGGTTCAGcaacgacgaggaggagcaccgcaccgccgccaccgccacaaACGTGACCGCCGTGACCAACACGACGAATTCTGATCTCCTGAAGCTGCTGTCGGACAGCGAAATTGAGAATCTGCTCGATCTGATGATGGAAGGCGACTTGCTAGAAGTCTCTCTGGACGAGACCCACGAGCTGTGGCGCATCCTGGAGACAATGCCGCCCACCTTGCTGGAAGCGGAGGCCATGGAGCGAGTTGCCATGCATTTGCAGCGCCAacggcagcagccgccgccaaaTCCACTGACCACCAACTCGGGTGCGGAGGACTCCAACGACAGCCTGCTGGTACAAAACAGCAGTCccaatagcaacagcaacagtggTGGAGCCACGGCCtcggccaacaacaacaacaacaacggcggtCGCAACAAGAACAAGCGGCGCTCCAACGACGCCAGCGGCAACTCGGCTGTGCCGCGCAAGAAGCAGAACACGCCCAAGCAGACGCCGGGCAAGAAGGGAACGGGTGCAACAGCGGGACGCAAGAGTGATGCCTCGAAGGCATCGCCAGCAGCGTCTGCCCCGGGCGTCGCCGTCGCCGATGCCGATGCGGAGAACAAGCAGGCCAATGGCGGCAACACCAACTCCAATACGGGAGCAGCAACTGGGGGCACCACGACTCCTACAGCTCCTGGCTCTGCGCACAAGAAACGCAAGCGCATCTCCACAacaaccgccgccgccaacaacaacaacaactccaacaccaacaatagcaacaacaacagcaatgcAAACAGTAATCCTGCCCAGGCAGCAGCAACcgccggcagcaacaacacgaCCGGTGGCGGTGGTCAGAAGAAGCACGCCCAGAGATCGCAGCAGGCGGCGCAagaggacgacgaggaggagtgCCGGGCGGAGAATTGCCACAAGCCCACCGGACGGGAGGTGGACTGGGTGCAGTGCGACGGCGGATGCAACGAGTGGTTCCACATGTACTGCGTGGGCCTCATACGCAGCCAGATCAAGGCAGACGACGATTACATTTGCATTCGATGCACCAAAACTGTGGCTGTGGCGGCTCTGGGCTCCGGGGCGGGGGCCACGACGACACCGACGACGACGCCGGGCAAGCAGCGGTCAGCTGCGCAGTCGGCGCGATAG
Protein Sequence
MSAKTEADNTTAANSGGIGGGANSSGSSSAGGGTASANGTATPARRLRTRNSTGHGAASGGESAKKSNASDETSSSTPVTPAGAHITPAAAGPTVAERPMPSVPMNHASSSVSASKKYHNSCPHPTPTPPSGHKKTVHTQPHSSNKFDQGKNEEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKIQPPASWSPPFAVDVDKLRFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSGKVLGPTPAASAGSAGGTPVKLEDGGGGTDYKVHEIPTRQQIAPPNESSTRRSKRFGNSSASCGLSGVTPTTTPKPSTAGVFVKTETKEEFKRDLLSSFNASINCGGGGTPSAAGGGPANTRGANQKKGLGEPPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAIEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERADGQLQLTLEALEESELETLISEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHMAGADLDPTDPYVDREMRKLQQIGADIESWESQAAKYFRRLTQQHELAEIEQFLKSASDINGQVPSHGLLKDALRKAREWLRSVEQLQQNNHVTYCHTLEAMIDRGLNIPIKLEELSRMQGHLSSAHQWKDNTACAFLKKGTNYTLLEVLMPRADAINIDSDLKPRFQDDFLKEKNPAEIVASFKNAEEQELLDMRDLRRQNMAKNPLRDMFCLCKSEFRNVMYNCQLCRDWFHEDCVPVPSATNQNGILNGGGGGPGAGSNRPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAQEAILAQQQQQKRRSEGGGVGNINSPRKPRRRTSLSKDASGSTESDDADDDDDDDDCRLRIVEDGFSNDEEEHRTAATATNVTAVTNTTNSDLLKLLSDSEIENLLDLMMEGDLLEVSLDETHELWRILETMPPTLLEAEAMERVAMHLQRQRQQPPPNPLTTNSGAEDSNDSLLVQNSSPNSNSNSGGATASANNNNNNGGRNKNKRRSNDASGNSAVPRKKQNTPKQTPGKKGTGATAGRKSDASKASPAASAPGVAVADADAENKQANGGNTNSNTGAATGGTTTPTAPGSAHKKRKRISTTTAAANNNNNSNTNNSNNNSNANSNPAQAAATAGSNNTTGGGGQKKHAQRSQQAAQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLIRSQIKADDDYICIRCTKTVAVAALGSGAGATTTPTTTPGKQRSAAQSAR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00608964;
90% Identity
iTF_00606100;
80% Identity
-