Basic Information

Gene Symbol
Arid4b
Assembly
GCA_008042615.1
Location
VNJW01000058.1:17461-19928[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-29 1.1e-25 90.0 0.1 1 88 293 378 293 379 0.96

Sequence Information

Coding Sequence
ATGGATGACCCGCCATCCCTGCCCGTGGGCACGGAGGTGAGTGCCAAGTATAAGGGCGCCTTCTGCGAGGCCAAGGTCAGCAAGGTGGTGCGAAACATCAAGGTAAAGGTGGCCTACAAGCAGGGCCTGGGCTCTGGCATTGTCTCCGACGATGCCATCAAGGCTCCAACCGGCCAGCTACGCGTGGGCGCCGTCGTGGAGGTCCGTCATCCGGATCGCAAGGAGATCGTGGAGGCAACTATAACCAAGATTCAGGATTGCTCGCAGTACACGGTGGTCTTTGATGACGGGGATATCACGACGCTAAGACGAACGGCTCTGTGTCTCAAGAGCGGGCGGCATTTCAACGAGAGCGAGACCCTGGACCAGCTGCCACTGACGCATCCGGAGCACTTTGGCAATCCCGTGGTCGGCGGTCGCCGCGGAAGGCGTCGCGGTCATCTAAACGAGGATAGttccgatgatgatgatgagagCGATGCCAAGGAGGTGGTCAACGAGAAGGAGGAGAATATCGGCAAGGTGGTGTGCGTGGAGACCGAGTCCAAGAAGAAAGACAAGGAAAAATGGTTCCCGGCCCTCGTCGTGGCGCCCACAGCACAGGCCACGGTCCGCATCCGCGTAAAGGACGAGTACCTGGTGCGCTCGTTCAAGGATGGCCGCTACTATACGGTGCCCAAGAAGGAGGCCACCGAGTTCACCCGCGAGGTGGCCAGCAAACAGGACGTGCCTGCTGTGCAGGCGGCCCTCGAGTTCCTCGACAGCAGTATCCTGCCGCCCCACTGGGACCGGGACTCCCTGTTCGGCCTCTCGAATCTCTCCAGCGACGACGAGGGCGAGATCGATTCGGACTCCTCCGACGACGAGCCGCACGAGGAGAAGGATCGCTTTGTGGCGCAGCTCTACAAGTACATGGATGACAGGGGCACGCCCCTAAACAAGGTGCCATCTATTCAGAGCCGCGACGTGGATCTCTATCGTCTCTTTCGGGCGGTGCAAAAGCGCGGCGGCTACAACCGCGTGACCTCGCAGAATCAGTGGAAGCTCATAGCCGTCCGCCTGGGCTTCACACCCTGCACGGTGAGTGTGATGAACCTGGTGAAGCAGGCGTACAAGAAGTTCCTGCAACCCTACGGCGACTTCCATCGCAAGCTCGGCTGCTCCATGCTGATGACCTCCCGCAACTCCAACCGCAGCAAGGGCCGGAGCCTGGTGCGAGCCAATTCGGTGGCCTCGCCCAAGCCCACAGAGACCACGAAGACGGAGACCATCAGCAAGCTGGCTCAGCCAAATCAAACGAACGTGGTGGTGCCGCCTTCTTCGACTGCCAGCTCAAgctctgcagcagcagcagcggcagtcgTAGCTACGCCTGTCCGAGCTACCCCAGTCGAGGTTGAGTCGGAGGACACCAGCGAGTCCAGTGTTGTGGTGGATGTGCCCGCCAAGAAGCAGAGGAAGGGCTCGGCCGCCAGCAGCAATCAGCAGGGCAAGGTCAAGACCCTGGTGGAGAAGTACGAGGAGAAATCGACGGCAGCACAGGCCGCgtctggagcaggagcaggagcagcagcagctgcaggctcAGGAAGTAGCGCAGCGTCTGTGGTCTCAGCCACGCCAGCTGTGGCTTCGGGAGTGGCCTCCACACCAGCCGCCTCAGCCGCAGCCTCTGCCGCTTCTGCGGGAGCAGCTCCAGCGTTCAGCAAAGACCAAGAATCGGACCTGCCGCTGGCCAAGATCAaggcagctgcagcggcagcggcggccgcCACCACCCGGAACAACAGCATGGAGAAGGAGACGAACATAAGCTCGGGCAGTAGTGCCTCCGCCTCCAGCAAGGCCAATTCAGCGGAGATGCAGCGCAGTCGGGATGTTTCGCCTTCAGGTGAGTGGAGAATTGATTTGAATTGA
Protein Sequence
MDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAPTGQLRVGAVVEVRHPDRKEIVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGHLNEDSSDDDDESDAKEVVNEKEENIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREVASKQDVPAVQAALEFLDSSILPPHWDRDSLFGLSNLSSDDEGEIDSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTSQNQWKLIAVRLGFTPCTVSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPTETTKTETISKLAQPNQTNVVVPPSSTASSSSAAAAAAVVATPVRATPVEVESEDTSESSVVVDVPAKKQRKGSAASSNQQGKVKTLVEKYEEKSTAAQAASGAGAGAAAAAGSGSSAASVVSATPAVASGVASTPAASAAASAASAGAAPAFSKDQESDLPLAKIKAAAAAAAAATTRNNSMEKETNISSGSSASASSKANSAEMQRSRDVSPSGEWRIDLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00511787;
90% Identity
iTF_00606099;
80% Identity
-